RNA–Protein interactions for RNA: ENST00000554226.5

NEDD1-206, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2

Gene NEDD1, Length 582 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-206ENST00000554226 CRHR2Q13324 411 aa17.82■□□□□ 0.44
NEDD1-206ENST00000554226 DLGAP5Q15398 846 aa17.82■□□□□ 0.44
NEDD1-206ENST00000554226 SUPT20HL1Q3ZLR7 823 aa17.82■□□□□ 0.44
NEDD1-206ENST00000554226 OTUD7BQ6GQQ9 843 aa17.82■□□□□ 0.44
NEDD1-206ENST00000554226 PI4KAP1Q8N8J0 262 aa17.82■□□□□ 0.44
NEDD1-206ENST00000554226 EFCC1Q9HA90 598 aa17.82■□□□□ 0.44
NEDD1-206ENST00000554226 NEURL1BA8MQ27 555 aa17.81■□□□□ 0.44
NEDD1-206ENST00000554226 ELL2O00472 640 aaPredicted RBP17.81■□□□□ 0.44
NEDD1-206ENST00000554226 FKBP1AP62942 108 aaKnown RBP17.81■□□□□ 0.44
NEDD1-206ENST00000554226 CAP1Q01518 475 aa17.81■□□□□ 0.44
NEDD1-206ENST00000554226 NEXNQ0ZGT2 675 aa17.81■□□□□ 0.44
NEDD1-206ENST00000554226 CERS5Q8N5B7 392 aa17.81■□□□□ 0.44
NEDD1-206ENST00000554226 ZNF333Q96JL9 665 aa17.81■□□□□ 0.44
NEDD1-206ENST00000554226 CD209Q9NNX6 404 aa17.81■□□□□ 0.44
NEDD1-206ENST00000554226 SPDYE2BA6NHP3 402 aa17.8■□□□□ 0.44
NEDD1-206ENST00000554226 CSF1RP07333 972 aa17.8■□□□□ 0.44
NEDD1-206ENST00000554226 SPDYE6P0CI01 402 aa17.8■□□□□ 0.44
NEDD1-206ENST00000554226 SP3Q02447 781 aa17.8■□□□□ 0.44
NEDD1-206ENST00000554226 CACNA1FO60840 1977 aa17.8■□□□□ 0.44
NEDD1-206ENST00000554226 ITGA6P23229 1130 aa17.79■□□□□ 0.44
NEDD1-206ENST00000554226 GJA5P36382 358 aa17.79■□□□□ 0.44
NEDD1-206ENST00000554226 CWF19L2Q2TBE0 894 aaKnown RBP17.79■□□□□ 0.44
NEDD1-206ENST00000554226 ANKRD13AQ8IZ07 590 aa17.79■□□□□ 0.44
NEDD1-206ENST00000554226 PTPN18Q99952 460 aa17.79■□□□□ 0.44
NEDD1-206ENST00000554226 TMEM106CQ9BVX2 250 aa17.79■□□□□ 0.44
NEDD1-206ENST00000554226 TRIOBPQ9H2D6 2365 aa17.79■□□□□ 0.44
NEDD1-206ENST00000554226 ARAP2Q8WZ64 1704 aa17.78■□□□□ 0.44
NEDD1-206ENST00000554226 MYO1BO43795 1136 aa17.78■□□□□ 0.44
NEDD1-206ENST00000554226 IL1R1P14778 569 aa17.78■□□□□ 0.44
NEDD1-206ENST00000554226 IREB2P48200 963 aaKnown RBP17.78■□□□□ 0.44
NEDD1-206ENST00000554226 CASP7P55210 303 aa17.78■□□□□ 0.44
NEDD1-206ENST00000554226 UBE3BQ7Z3V4 1068 aa17.78■□□□□ 0.44
NEDD1-206ENST00000554226 MPHOSPH8Q99549 860 aa17.78■□□□□ 0.44
NEDD1-206ENST00000554226 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.78■□□□□ 0.44
NEDD1-206ENST00000554226 SZT2Q5T011 3432 aa17.78■□□□□ 0.44
NEDD1-206ENST00000554226 USP2O75604 605 aaPredicted RBP17.77■□□□□ 0.44
NEDD1-206ENST00000554226 CHRNDQ07001 517 aa17.77■□□□□ 0.44
NEDD1-206ENST00000554226 GCKRQ14397 625 aa17.77■□□□□ 0.44
NEDD1-206ENST00000554226 OTUD5Q96G74 571 aa17.77■□□□□ 0.44
NEDD1-206ENST00000554226 APAF1O14727 1248 aa17.76■□□□□ 0.43
NEDD1-206ENST00000554226 CFAP100Q494V2 611 aa17.76■□□□□ 0.43
NEDD1-206ENST00000554226 NBPF12Q5TAG4 269 aaPredicted RBP17.76■□□□□ 0.43
NEDD1-206ENST00000554226 TSPYL6Q8N831 410 aa17.76■□□□□ 0.43
NEDD1-206ENST00000554226 MS4A4AQ96JQ5 239 aa17.76■□□□□ 0.43
NEDD1-206ENST00000554226 PRMT6Q96LA8 375 aaPredicted RBP17.76■□□□□ 0.43
NEDD1-206ENST00000554226 KCNJ4P48050 445 aa17.75■□□□□ 0.43
NEDD1-206ENST00000554226 ARHGEF6Q15052 776 aa17.75■□□□□ 0.43
NEDD1-206ENST00000554226 SLC9C1Q4G0N8 1177 aa17.75■□□□□ 0.43
NEDD1-206ENST00000554226 PCDHAC2Q9Y5I4 1007 aa17.75■□□□□ 0.43
NEDD1-206ENST00000554226 PTCH2Q9Y6C5 1203 aa17.75■□□□□ 0.43
NEDD1-206ENST00000554226 RANBP2P49792 3224 aaKnown RBP17.74■□□□□ 0.43
NEDD1-206ENST00000554226 H0YGN5 161 aa17.74■□□□□ 0.43
NEDD1-206ENST00000554226 RASA3Q14644 834 aa17.74■□□□□ 0.43
NEDD1-206ENST00000554226 NBPF11Q86T75 865 aa17.74■□□□□ 0.43
NEDD1-206ENST00000554226 STK31Q9BXU1 1019 aa17.74■□□□□ 0.43
NEDD1-206ENST00000554226 AOX1Q06278 1338 aa17.73■□□□□ 0.43
NEDD1-206ENST00000554226 CLRN2A0PK11 232 aa17.73■□□□□ 0.43
NEDD1-206ENST00000554226 TNFAIP1Q13829 316 aa17.73■□□□□ 0.43
NEDD1-206ENST00000554226 ZNF804AQ7Z570 1209 aa17.73■□□□□ 0.43
NEDD1-206ENST00000554226 SLC4A8Q2Y0W8 1093 aa17.72■□□□□ 0.43
NEDD1-206ENST00000554226 SPDYE2Q495Y8 402 aa17.72■□□□□ 0.43
NEDD1-206ENST00000554226 LINS1Q8NG48 757 aa17.72■□□□□ 0.43
NEDD1-206ENST00000554226 OPTNQ96CV9 577 aa17.72■□□□□ 0.43
NEDD1-206ENST00000554226 TEPSINQ96N21 525 aa17.72■□□□□ 0.43
NEDD1-206ENST00000554226 MYH16Q9H6N6 1097 aa17.72■□□□□ 0.43
NEDD1-206ENST00000554226 FAM205AQ6ZU69 1335 aa17.72■□□□□ 0.43
NEDD1-206ENST00000554226 ANKRD18BA2A2Z9 1011 aa17.71■□□□□ 0.43
NEDD1-206ENST00000554226 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.71■□□□□ 0.43
NEDD1-206ENST00000554226 G2E3Q7L622 706 aa17.71■□□□□ 0.43
NEDD1-206ENST00000554226 BRI3BPQ8WY22 251 aa17.71■□□□□ 0.43
NEDD1-206ENST00000554226 VEZTQ9HBM0 779 aa17.71■□□□□ 0.43
NEDD1-206ENST00000554226 ZCCHC17Q9NP64 241 aaKnown RBP17.71■□□□□ 0.43
NEDD1-206ENST00000554226 SERPINA10Q9UK55 444 aa17.71■□□□□ 0.43
NEDD1-206ENST00000554226 SNAP23O00161 211 aa17.7■□□□□ 0.42
NEDD1-206ENST00000554226 GTF2A2P52657 109 aa17.7■□□□□ 0.42
NEDD1-206ENST00000554226 CHRDL2Q6WN34 429 aa17.7■□□□□ 0.42
NEDD1-206ENST00000554226 ELP3Q9H9T3 547 aa17.7■□□□□ 0.42
NEDD1-206ENST00000554226 ZFYVE28Q9HCC9 887 aa17.7■□□□□ 0.42
NEDD1-206ENST00000554226 F8W031 263 aaPredicted RBP17.69■□□□□ 0.42
NEDD1-206ENST00000554226 TAF5LO75529 589 aa17.69■□□□□ 0.42
NEDD1-206ENST00000554226 GNRH1P01148 92 aa17.69■□□□□ 0.42
NEDD1-206ENST00000554226 TAF1CQ15572 869 aaPredicted RBP17.69■□□□□ 0.42
NEDD1-206ENST00000554226 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.69■□□□□ 0.42
NEDD1-206ENST00000554226 ZSWIM8A7E2V4 1837 aa17.68■□□□□ 0.42
NEDD1-206ENST00000554226 SLC4A2P04920 1241 aa17.68■□□□□ 0.42
NEDD1-206ENST00000554226 FOXO4P98177 505 aa17.68■□□□□ 0.42
NEDD1-206ENST00000554226 FLIIQ13045 1269 aa17.68■□□□□ 0.42
NEDD1-206ENST00000554226 IFIT5Q13325 482 aaKnown RBP17.68■□□□□ 0.42
NEDD1-206ENST00000554226 VGLL4Q14135 290 aa17.68■□□□□ 0.42
NEDD1-206ENST00000554226 TWISTNBQ3B726 338 aaPredicted RBP17.68■□□□□ 0.42
NEDD1-206ENST00000554226 DNAAF4Q8WXU2 420 aa17.68■□□□□ 0.42
NEDD1-206ENST00000554226 ZNF70Q9UC06 446 aaPredicted RBP17.68■□□□□ 0.42
NEDD1-206ENST00000554226 CCL15-CCL14A0A0B4J2E2 113 aa17.67■□□□□ 0.42
NEDD1-206ENST00000554226 PRMT2P55345 433 aa17.67■□□□□ 0.42
NEDD1-206ENST00000554226 CCL15Q16663 113 aa17.67■□□□□ 0.42
NEDD1-206ENST00000554226 CCDC27Q2M243 656 aa17.67■□□□□ 0.42
NEDD1-206ENST00000554226 FAM43AQ8N2R8 423 aa17.67■□□□□ 0.42
NEDD1-206ENST00000554226 SH3TC2Q8TF17 1288 aa17.67■□□□□ 0.42
NEDD1-206ENST00000554226 RBM27Q9P2N5 1060 aaKnown RBP17.67■□□□□ 0.42
NEDD1-206ENST00000554226 SPDYE5A6NIY4 337 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms