RNA–Protein interactions for RNA: ENST00000554196.1

LINC00520-202, long intergenic non-protein coding RNA 520, humanhuman

TSL 3 BASIC

Gene LINC00520, Length 514 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00520-202ENST00000554196 UBE3CQ15386 1083 aa11□□□□□ -0.65
LINC00520-202ENST00000554196 TSGA10IPQ3SY00 556 aa11□□□□□ -0.65
LINC00520-202ENST00000554196 CAVIN4Q5BKX8 364 aa11□□□□□ -0.65
LINC00520-202ENST00000554196 CREB3L3Q68CJ9 461 aa11□□□□□ -0.65
LINC00520-202ENST00000554196 SPATA5Q8NB90 893 aa11□□□□□ -0.65
LINC00520-202ENST00000554196 CELF1Q92879 486 aaKnown RBP11□□□□□ -0.65
LINC00520-202ENST00000554196 RBM17Q96I25 401 aaKnown RBP11□□□□□ -0.65
LINC00520-202ENST00000554196 CHMP5Q9NZZ3 219 aa11□□□□□ -0.65
LINC00520-202ENST00000554196 MINPP1Q9UNW1 487 aa11□□□□□ -0.65
LINC00520-202ENST00000554196 PSME4Q14997 1843 aa11□□□□□ -0.65
LINC00520-202ENST00000554196 NEK4P51957 841 aa10.99□□□□□ -0.65
LINC00520-202ENST00000554196 DDR1Q08345 913 aa10.99□□□□□ -0.65
LINC00520-202ENST00000554196 MAP3K12Q12852 859 aa10.99□□□□□ -0.65
LINC00520-202ENST00000554196 RASGRF1Q13972 1273 aa10.99□□□□□ -0.65
LINC00520-202ENST00000554196 SCARF1Q14162 830 aa10.99□□□□□ -0.65
LINC00520-202ENST00000554196 PRPF40BQ6NWY9 871 aaKnown RBP10.99□□□□□ -0.65
LINC00520-202ENST00000554196 ZNF589Q86UQ0 364 aaPredicted RBP10.99□□□□□ -0.65
LINC00520-202ENST00000554196 HELBQ8NG08 1087 aaPredicted RBP10.99□□□□□ -0.65
LINC00520-202ENST00000554196 ANTXR1Q9H6X2 564 aa10.99□□□□□ -0.65
LINC00520-202ENST00000554196 DENND2AQ9ULE3 1009 aa10.99□□□□□ -0.65
LINC00520-202ENST00000554196 NDUFB9Q9Y6M9 179 aa10.99□□□□□ -0.65
LINC00520-202ENST00000554196 FOCADQ5VW36 1801 aa10.99□□□□□ -0.65
LINC00520-202ENST00000554196 XDHP47989 1333 aa10.99□□□□□ -0.65
LINC00520-202ENST00000554196 PNPLA7Q6ZV29 1317 aa10.99□□□□□ -0.65
LINC00520-202ENST00000554196 BAZ2AQ9UIF9 1905 aaKnown RBP10.99□□□□□ -0.65
LINC00520-202ENST00000554196 SLC27A2O14975 620 aa10.98□□□□□ -0.65
LINC00520-202ENST00000554196 HOXA10P31260 410 aaPredicted RBP10.98□□□□□ -0.65
LINC00520-202ENST00000554196 ADD2P35612 726 aa10.98□□□□□ -0.65
LINC00520-202ENST00000554196 BAG6P46379 1132 aa10.98□□□□□ -0.65
LINC00520-202ENST00000554196 SF3B2Q13435 895 aaKnown RBP10.98□□□□□ -0.65
LINC00520-202ENST00000554196 CRAMP1Q96RY5 1269 aa10.98□□□□□ -0.65
LINC00520-202ENST00000554196 ANP32EQ9BTT0 268 aa10.98□□□□□ -0.65
LINC00520-202ENST00000554196 SLKQ9H2G2 1235 aaPredicted RBP10.98□□□□□ -0.65
LINC00520-202ENST00000554196 STK32BQ9NY57 414 aa10.98□□□□□ -0.65
LINC00520-202ENST00000554196 CTNNA3Q9UI47 895 aa10.98□□□□□ -0.65
LINC00520-202ENST00000554196 LEMD3Q9Y2U8 911 aa10.98□□□□□ -0.65
LINC00520-202ENST00000554196 CYP46A1Q9Y6A2 500 aa10.98□□□□□ -0.65
LINC00520-202ENST00000554196 ZMYM6O95789 1325 aa10.98□□□□□ -0.65
LINC00520-202ENST00000554196 COL1A1P02452 1464 aaPredicted RBP10.98□□□□□ -0.65
LINC00520-202ENST00000554196 MYH15Q9Y2K3 1946 aa10.97□□□□□ -0.65
LINC00520-202ENST00000554196 KLRG2A4D1S0 409 aaPredicted RBP10.97□□□□□ -0.65
LINC00520-202ENST00000554196 CD2BP2O95400 341 aaKnown RBP10.97□□□□□ -0.65
LINC00520-202ENST00000554196 CYP2E1P05181 493 aaPredicted RBP10.97□□□□□ -0.65
LINC00520-202ENST00000554196 WASHC4Q2M389 1173 aa10.97□□□□□ -0.65
LINC00520-202ENST00000554196 VPS53Q5VIR6 699 aa10.97□□□□□ -0.65
LINC00520-202ENST00000554196 C15orf52Q6ZUT6 534 aaKnown RBP10.97□□□□□ -0.65
LINC00520-202ENST00000554196 VPS37DQ86XT2 251 aa10.97□□□□□ -0.65
LINC00520-202ENST00000554196 COL23A1Q86Y22 540 aaPredicted RBP10.97□□□□□ -0.65
LINC00520-202ENST00000554196 BRIP1Q9BX63 1249 aa10.97□□□□□ -0.65
LINC00520-202ENST00000554196 CWC22Q9HCG8 908 aaKnown RBP10.97□□□□□ -0.65
LINC00520-202ENST00000554196 MYH8P13535 1937 aa10.97□□□□□ -0.65
LINC00520-202ENST00000554196 ECM29Q5VYK3 1845 aa10.96□□□□□ -0.65
LINC00520-202ENST00000554196 IDH1O75874 414 aaKnown RBP10.96□□□□□ -0.65
LINC00520-202ENST00000554196 BBOX1O75936 387 aa10.96□□□□□ -0.65
LINC00520-202ENST00000554196 HMGB1P09429 215 aaKnown RBP10.96□□□□□ -0.65
LINC00520-202ENST00000554196 PDE6AP16499 860 aa10.96□□□□□ -0.65
LINC00520-202ENST00000554196 CASTP20810 708 aaKnown RBP10.96□□□□□ -0.65
LINC00520-202ENST00000554196 ANKRD1Q15327 319 aa10.96□□□□□ -0.65
LINC00520-202ENST00000554196 BLOC1S2Q6QNY1 142 aa10.96□□□□□ -0.65
LINC00520-202ENST00000554196 RASEFQ8IZ41 740 aa10.96□□□□□ -0.65
LINC00520-202ENST00000554196 INTS4Q96HW7 963 aaKnown RBP10.96□□□□□ -0.65
LINC00520-202ENST00000554196 JAKMIP1Q96N16 626 aaKnown RBP10.96□□□□□ -0.65
LINC00520-202ENST00000554196 TTC14Q96N46 770 aa10.96□□□□□ -0.65
LINC00520-202ENST00000554196 CAMKK2Q96RR4 588 aa10.96□□□□□ -0.65
LINC00520-202ENST00000554196 ALDH8A1Q9H2A2 487 aaPredicted RBP10.96□□□□□ -0.65
LINC00520-202ENST00000554196 ZSWIM6Q9HCJ5 1215 aa10.96□□□□□ -0.65
LINC00520-202ENST00000554196 PIH1D3Q9NQM4 214 aaKnown RBP10.96□□□□□ -0.65
LINC00520-202ENST00000554196 PODXL2Q9NZ53 605 aa10.96□□□□□ -0.65
LINC00520-202ENST00000554196 PARP3Q9Y6F1 533 aa10.96□□□□□ -0.65
LINC00520-202ENST00000554196 M0R2C6 588 aa10.95□□□□□ -0.66
LINC00520-202ENST00000554196 GPAA1O43292 621 aa10.95□□□□□ -0.66
LINC00520-202ENST00000554196 ATP2B4P23634 1241 aa10.95□□□□□ -0.66
LINC00520-202ENST00000554196 DDIT3P35638 169 aa10.95□□□□□ -0.66
LINC00520-202ENST00000554196 PDE6BP35913 854 aa10.95□□□□□ -0.66
LINC00520-202ENST00000554196 BCAMP50895 628 aa10.95□□□□□ -0.66
LINC00520-202ENST00000554196 CUL4AQ13619 759 aa10.95□□□□□ -0.66
LINC00520-202ENST00000554196 SLC15A2Q16348 729 aa10.95□□□□□ -0.66
LINC00520-202ENST00000554196 SLC9C2Q5TAH2 1124 aa10.95□□□□□ -0.66
LINC00520-202ENST00000554196 PI16Q6UXB8 463 aa10.95□□□□□ -0.66
LINC00520-202ENST00000554196 CCDC129Q6ZRS4 1044 aa10.95□□□□□ -0.66
LINC00520-202ENST00000554196 RUFY3Q7L099 469 aa10.95□□□□□ -0.66
LINC00520-202ENST00000554196 FBXO33Q7Z6M2 555 aa10.95□□□□□ -0.66
LINC00520-202ENST00000554196 ZGPATQ8N5A5 531 aaKnown RBP10.95□□□□□ -0.66
LINC00520-202ENST00000554196 OSBP2Q969R2 916 aa10.95□□□□□ -0.66
LINC00520-202ENST00000554196 ZSCAN31Q96LW9 406 aaPredicted RBP10.95□□□□□ -0.66
LINC00520-202ENST00000554196 UPF3BQ9BZI7 483 aaKnown RBP10.95□□□□□ -0.66
LINC00520-202ENST00000554196 SH2B1Q9NRF2 756 aaPredicted RBP10.95□□□□□ -0.66
LINC00520-202ENST00000554196 MYH6P13533 1939 aa10.95□□□□□ -0.66
LINC00520-202ENST00000554196 ZNF646O15015 1829 aaPredicted RBP10.95□□□□□ -0.66
LINC00520-202ENST00000554196 MYH1P12882 1939 aa10.94□□□□□ -0.66
LINC00520-202ENST00000554196 TCHHQ07283 1943 aa10.94□□□□□ -0.66
LINC00520-202ENST00000554196 BRCA1P38398 1863 aaKnown RBP10.94□□□□□ -0.66
LINC00520-202ENST00000554196 ZNF532Q9HCE3 1301 aa10.94□□□□□ -0.66
LINC00520-202ENST00000554196 SALL1Q9NSC2 1324 aa10.94□□□□□ -0.66
LINC00520-202ENST00000554196 IRS2Q9Y4H2 1338 aa10.94□□□□□ -0.66
LINC00520-202ENST00000554196 SLX4Q8IY92 1834 aa10.94□□□□□ -0.66
LINC00520-202ENST00000554196 TCRBV5S4A2TA0A5A2 114 aa10.94□□□□□ -0.66
LINC00520-202ENST00000554196 HSPD1P10809 573 aaKnown RBP10.94□□□□□ -0.66
LINC00520-202ENST00000554196 NPR1P16066 1061 aa10.94□□□□□ -0.66
LINC00520-202ENST00000554196 GNAT2P19087 354 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms