RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 HNRNPMP52272 730 aaKnown RBP eCLIP5.27□□□□□ -1.575e-9■■■■■ 34.7
SLIRP-202ENST00000553981 PTPRKQ15262 1439 aa5.27□□□□□ -1.57
SLIRP-202ENST00000553981 TMEM132AQ24JP5 1023 aa5.27□□□□□ -1.57
SLIRP-202ENST00000553981 CDCA8Q53HL2 280 aa5.27□□□□□ -1.57
SLIRP-202ENST00000553981 GDF6Q6KF10 455 aaPredicted RBP5.27□□□□□ -1.57
SLIRP-202ENST00000553981 SUPT6HQ7KZ85 1726 aaKnown RBP5.27□□□□□ -1.57
SLIRP-202ENST00000553981 DZIP1LQ8IYY4 767 aaKnown RBP5.27□□□□□ -1.57
SLIRP-202ENST00000553981 NSUN5Q96P11 429 aaKnown RBP5.27□□□□□ -1.57
SLIRP-202ENST00000553981 CLTCQ00610 1675 aaKnown RBP5.27□□□□□ -1.57
SLIRP-202ENST00000553981 SYCP2Q9BX26 1530 aa5.27□□□□□ -1.57
SLIRP-202ENST00000553981 GPATCH8Q9UKJ3 1502 aaKnown RBP5.27□□□□□ -1.57
SLIRP-202ENST00000553981 TCOF1Q13428 1488 aaKnown RBP5.26□□□□□ -1.57
SLIRP-202ENST00000553981 ZNF644Q9H582 1327 aaPredicted RBP5.26□□□□□ -1.57
SLIRP-202ENST00000553981 PLXNC1O60486 1568 aa5.26□□□□□ -1.57
SLIRP-202ENST00000553981 NEURL4Q96JN8 1562 aa5.26□□□□□ -1.57
SLIRP-202ENST00000553981 HOXD8P13378 290 aaPredicted RBP5.26□□□□□ -1.57
SLIRP-202ENST00000553981 SOX18P35713 384 aa5.26□□□□□ -1.57
SLIRP-202ENST00000553981 TMEM130Q8N3G9 435 aa5.26□□□□□ -1.57
SLIRP-202ENST00000553981 IL22RA1Q8N6P7 574 aa5.26□□□□□ -1.57
SLIRP-202ENST00000553981 PRIMPOLQ96LW4 560 aa5.26□□□□□ -1.57
SLIRP-202ENST00000553981 MRPL18Q9H0U6 180 aaKnown RBP5.26□□□□□ -1.57
SLIRP-202ENST00000553981 AKTIPQ9H8T0 292 aa5.26□□□□□ -1.57
SLIRP-202ENST00000553981 MYO3AQ8NEV4 1616 aa5.26□□□□□ -1.57
SLIRP-202ENST00000553981 FMN1Q68DA7 1419 aa5.25□□□□□ -1.57
SLIRP-202ENST00000553981 STRCP1A6NGW2 1772 aa5.25□□□□□ -1.57
SLIRP-202ENST00000553981 F8W735 103 aaPredicted RBP5.25□□□□□ -1.57
SLIRP-202ENST00000553981 RFX1P22670 979 aa5.25□□□□□ -1.57
SLIRP-202ENST00000553981 SETDB1Q15047 1291 aa5.25□□□□□ -1.57
SLIRP-202ENST00000553981 TRIP4Q15650 581 aaPredicted RBP5.25□□□□□ -1.57
SLIRP-202ENST00000553981 ETFBKMTQ8IXQ9 262 aa5.25□□□□□ -1.57
SLIRP-202ENST00000553981 KRTAP4-12Q9BQ66 201 aa5.25□□□□□ -1.57
SLIRP-202ENST00000553981 SAP130Q9H0E3 1048 aa5.25□□□□□ -1.57
SLIRP-202ENST00000553981 NOVA2Q9UNW9 492 aaKnown RBP5.25□□□□□ -1.57
SLIRP-202ENST00000553981 IQSEC2Q5JU85 1478 aa5.25□□□□□ -1.57
SLIRP-202ENST00000553981 INO80Q9ULG1 1556 aaPredicted RBP5.25□□□□□ -1.57
SLIRP-202ENST00000553981 MROH2AA6NES4 1674 aa5.24□□□□□ -1.57
SLIRP-202ENST00000553981 ZNF142P52746 1687 aaPredicted RBP5.24□□□□□ -1.57
SLIRP-202ENST00000553981 CASKIN1Q8WXD9 1431 aa5.24□□□□□ -1.57
SLIRP-202ENST00000553981 DNMT1P26358 1616 aaKnown RBP5.24□□□□□ -1.57
SLIRP-202ENST00000553981 PRMT3O60678 531 aa5.24□□□□□ -1.57
SLIRP-202ENST00000553981 HSPA1LP34931 641 aa5.24□□□□□ -1.57
SLIRP-202ENST00000553981 OCLNQ16625 522 aa5.24□□□□□ -1.57
SLIRP-202ENST00000553981 SWI5Q1ZZU3 235 aa5.24□□□□□ -1.57
SLIRP-202ENST00000553981 FAM26DQ5JW98 314 aa5.24□□□□□ -1.57
SLIRP-202ENST00000553981 KRTAP1-3Q8IUG1 177 aa5.24□□□□□ -1.57
SLIRP-202ENST00000553981 MAP4K3Q8IVH8 894 aa5.24□□□□□ -1.57
SLIRP-202ENST00000553981 RBSNQ9H1K0 784 aa5.24□□□□□ -1.57
SLIRP-202ENST00000553981 SRA1Q9HD15 236 aaKnown RBP5.24□□□□□ -1.57
SLIRP-202ENST00000553981 ZNF777Q9ULD5 760 aaPredicted RBP5.24□□□□□ -1.57
SLIRP-202ENST00000553981 TRIM33Q9UPN9 1127 aa5.24□□□□□ -1.57
SLIRP-202ENST00000553981 MBD5Q9P267 1494 aa5.24□□□□□ -1.57
SLIRP-202ENST00000553981 MED1Q15648 1581 aaPredicted RBP5.24□□□□□ -1.57
SLIRP-202ENST00000553981 CEP170BQ9Y4F5 1589 aaPredicted RBP5.24□□□□□ -1.57
SLIRP-202ENST00000553981 ACIN1Q9UKV3 1341 aaKnown RBP5.23□□□□□ -1.57
SLIRP-202ENST00000553981 NPATQ14207 1427 aa5.23□□□□□ -1.57
SLIRP-202ENST00000553981 FSTP19883 344 aa5.23□□□□□ -1.57
SLIRP-202ENST00000553981 BRD2P25440 801 aaKnown RBP5.23□□□□□ -1.57
SLIRP-202ENST00000553981 C16orf46Q6P387 395 aa5.23□□□□□ -1.57
SLIRP-202ENST00000553981 Q6ZS46 218 aa5.23□□□□□ -1.57
SLIRP-202ENST00000553981 NLRP13Q86W25 1043 aa5.23□□□□□ -1.57
SLIRP-202ENST00000553981 AGGF1Q8N302 714 aaeCLIP5.23□□□□□ -1.57
SLIRP-202ENST00000553981 RGS17Q9UGC6 210 aaPredicted RBP5.23□□□□□ -1.57
SLIRP-202ENST00000553981 ZMIZ1Q9ULJ6 1067 aa5.23□□□□□ -1.57
SLIRP-202ENST00000553981 ATP7AQ04656 1500 aa5.23□□□□□ -1.57
SLIRP-202ENST00000553981 VWDEQ8N2E2 1590 aa5.22□□□□□ -1.57
SLIRP-202ENST00000553981 A2MP01023 1474 aa5.22□□□□□ -1.57
SLIRP-202ENST00000553981 PLA2R1Q13018 1463 aa5.22□□□□□ -1.57
SLIRP-202ENST00000553981 UBAP1LF5GYI3 381 aa5.22□□□□□ -1.57
SLIRP-202ENST00000553981 COL13A1Q5TAT6 717 aaPredicted RBP5.22□□□□□ -1.57
SLIRP-202ENST00000553981 GGT6Q6P531 493 aa5.22□□□□□ -1.57
SLIRP-202ENST00000553981 SLC51AQ86UW1 340 aa5.22□□□□□ -1.57
SLIRP-202ENST00000553981 CLIP1P30622 1438 aa5.22□□□□□ -1.57
SLIRP-202ENST00000553981 CNTLNQ9NXG0 1405 aa5.22□□□□□ -1.57
SLIRP-202ENST00000553981 ADGBQ8N7X0 1667 aa5.21□□□□□ -1.57
SLIRP-202ENST00000553981 LINC01387J3KSC0 135 aa5.21□□□□□ -1.58
SLIRP-202ENST00000553981 TNFRSF10BO14763 440 aa5.21□□□□□ -1.58
SLIRP-202ENST00000553981 GLB1P16278 677 aa5.21□□□□□ -1.58
SLIRP-202ENST00000553981 ELOAQ14241 798 aaKnown RBP5.21□□□□□ -1.58
SLIRP-202ENST00000553981 CAPN12Q6ZSI9 719 aa5.21□□□□□ -1.58
SLIRP-202ENST00000553981 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.21□□□□□ -1.58
SLIRP-202ENST00000553981 CACTIN-AS1Q8N1I8 211 aa5.21□□□□□ -1.58
SLIRP-202ENST00000553981 GALNT11Q8NCW6 608 aa5.21□□□□□ -1.58
SLIRP-202ENST00000553981 OR13H1Q8NG92 308 aa5.21□□□□□ -1.58
SLIRP-202ENST00000553981 DCAF11Q8TEB1 546 aa5.21□□□□□ -1.58
SLIRP-202ENST00000553981 STK32AQ8WU08 396 aa5.21□□□□□ -1.58
SLIRP-202ENST00000553981 COL26A1Q96A83 441 aa5.21□□□□□ -1.58
SLIRP-202ENST00000553981 MUC3BQ9H195 1237 aa5.21□□□□□ -1.58
SLIRP-202ENST00000553981 PCMTD2Q9NV79 361 aa5.21□□□□□ -1.58
SLIRP-202ENST00000553981 PPME1Q9Y570 386 aa5.21□□□□□ -1.58
SLIRP-202ENST00000553981 SPAG9O60271 1321 aaKnown RBP5.21□□□□□ -1.58
SLIRP-202ENST00000553981 TIAM1Q13009 1591 aa5.21□□□□□ -1.58
SLIRP-202ENST00000553981 A2ML1A8K2U0 1454 aa5.2□□□□□ -1.58
SLIRP-202ENST00000553981 SSTR4P31391 388 aa5.2□□□□□ -1.58
SLIRP-202ENST00000553981 ATP11AP98196 1134 aa5.2□□□□□ -1.58
SLIRP-202ENST00000553981 LCE3BQ5TA77 95 aa5.2□□□□□ -1.58
SLIRP-202ENST00000553981 ADAMTSL4Q6UY14 1074 aa5.2□□□□□ -1.58
SLIRP-202ENST00000553981 PIK3R5Q8WYR1 880 aa5.2□□□□□ -1.58
SLIRP-202ENST00000553981 UBL7Q96S82 380 aaPredicted RBP5.2□□□□□ -1.58
SLIRP-202ENST00000553981 MKNK1Q9BUB5 465 aa5.2□□□□□ -1.58
SLIRP-202ENST00000553981 LACRTQ9GZZ8 138 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms