RNA–Protein interactions for RNA: ENST00000553718.1

TTC8-208, Transcript of tetratricopeptide repeat domain 8, humanhuman

TSL 3

Gene TTC8, Length 479 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC8-208ENST00000553718 RC3H1Q5TC82 1133 aaKnown RBP12.65□□□□□ -0.38
TTC8-208ENST00000553718 TTC6Q86TZ1 520 aa12.65□□□□□ -0.38
TTC8-208ENST00000553718 MB21D2Q8IYB1 491 aaPredicted RBP12.65□□□□□ -0.38
TTC8-208ENST00000553718 TMEM87BQ96K49 555 aa12.65□□□□□ -0.38
TTC8-208ENST00000553718 SPATA32Q96LK8 384 aa12.65□□□□□ -0.38
TTC8-208ENST00000553718 TCEANC2Q96MN5 208 aa12.65□□□□□ -0.38
TTC8-208ENST00000553718 ZNF396Q96N95 335 aaPredicted RBP12.65□□□□□ -0.38
TTC8-208ENST00000553718 CCDC39Q9UFE4 941 aa12.65□□□□□ -0.38
TTC8-208ENST00000553718 RCOR1Q9UKL0 485 aa12.65□□□□□ -0.38
TTC8-208ENST00000553718 NOL7Q9UMY1 257 aaKnown RBP12.65□□□□□ -0.38
TTC8-208ENST00000553718 ARAP2Q8WZ64 1704 aa12.65□□□□□ -0.38
TTC8-208ENST00000553718 GOLGA6L4A6NEF3 574 aa12.64□□□□□ -0.39
TTC8-208ENST00000553718 MAP3K12Q12852 859 aa12.64□□□□□ -0.39
TTC8-208ENST00000553718 TRDNQ13061 729 aa12.64□□□□□ -0.39
TTC8-208ENST00000553718 SCARF1Q14162 830 aa12.64□□□□□ -0.39
TTC8-208ENST00000553718 SF3B3Q15393 1217 aaKnown RBP12.64□□□□□ -0.39
TTC8-208ENST00000553718 SLC10A5Q5PT55 438 aa12.64□□□□□ -0.39
TTC8-208ENST00000553718 RBM43Q6ZSC3 357 aaKnown RBP12.64□□□□□ -0.39
TTC8-208ENST00000553718 RALYLQ86SE5 291 aaKnown RBP12.64□□□□□ -0.39
TTC8-208ENST00000553718 LEO1Q8WVC0 666 aaPredicted RBP12.64□□□□□ -0.39
TTC8-208ENST00000553718 MPHOSPH8Q99549 860 aa12.64□□□□□ -0.39
TTC8-208ENST00000553718 PUS7LQ9H0K6 701 aaKnown RBP12.64□□□□□ -0.39
TTC8-208ENST00000553718 AKAP11Q9UKA4 1901 aa12.64□□□□□ -0.39
TTC8-208ENST00000553718 TCHHQ07283 1943 aa12.63□□□□□ -0.39
TTC8-208ENST00000553718 PTPDC1A2A3K4 754 aa12.63□□□□□ -0.39
TTC8-208ENST00000553718 PATL2C9JE40 543 aaKnown RBP12.63□□□□□ -0.39
TTC8-208ENST00000553718 CTAGE5O15320 804 aa12.63□□□□□ -0.39
TTC8-208ENST00000553718 FOXP2O15409 715 aa12.63□□□□□ -0.39
TTC8-208ENST00000553718 CTDNEP1O95476 244 aa12.63□□□□□ -0.39
TTC8-208ENST00000553718 NTSR2O95665 410 aa12.63□□□□□ -0.39
TTC8-208ENST00000553718 CHGBP05060 677 aa12.63□□□□□ -0.39
TTC8-208ENST00000553718 CCDC192P0DO97 292 aa12.63□□□□□ -0.39
TTC8-208ENST00000553718 STK3Q13188 491 aa12.63□□□□□ -0.39
TTC8-208ENST00000553718 COL9A3Q14050 684 aaPredicted RBP12.63□□□□□ -0.39
TTC8-208ENST00000553718 SLC9C2Q5TAH2 1124 aa12.63□□□□□ -0.39
TTC8-208ENST00000553718 SYNE4Q8N205 404 aa12.63□□□□□ -0.39
TTC8-208ENST00000553718 PNPLA7Q6ZV29 1317 aa12.62□□□□□ -0.39
TTC8-208ENST00000553718 CNTNAP4Q9C0A0 1308 aa12.62□□□□□ -0.39
TTC8-208ENST00000553718 LAMA4Q16363 1823 aa12.62□□□□□ -0.39
TTC8-208ENST00000553718 LAMB2P55268 1798 aa12.62□□□□□ -0.39
TTC8-208ENST00000553718 TCRBV5S4A2TA0A5A2 114 aa12.62□□□□□ -0.39
TTC8-208ENST00000553718 ZNF500O60304 480 aaPredicted RBP12.62□□□□□ -0.39
TTC8-208ENST00000553718 JAK2O60674 1132 aa12.62□□□□□ -0.39
TTC8-208ENST00000553718 MSNP26038 577 aaKnown RBP12.62□□□□□ -0.39
TTC8-208ENST00000553718 APOBRQ0VD83 1088 aa12.62□□□□□ -0.39
TTC8-208ENST00000553718 VPS72Q15906 364 aa12.62□□□□□ -0.39
TTC8-208ENST00000553718 SPATA5Q8NB90 893 aa12.62□□□□□ -0.39
TTC8-208ENST00000553718 STRBPQ96SI9 672 aaKnown RBP12.62□□□□□ -0.39
TTC8-208ENST00000553718 RTN4Q9NQC3 1192 aaKnown RBP12.62□□□□□ -0.39
TTC8-208ENST00000553718 CCDC9Q9Y3X0 531 aaKnown RBP12.62□□□□□ -0.39
TTC8-208ENST00000553718 MYH7P12883 1935 aa12.62□□□□□ -0.39
TTC8-208ENST00000553718 PRC1O43663 620 aa12.61□□□□□ -0.39
TTC8-208ENST00000553718 TPM3P06753 285 aa12.61□□□□□ -0.39
TTC8-208ENST00000553718 PDE6AP16499 860 aa12.61□□□□□ -0.39
TTC8-208ENST00000553718 NT5C2P49902 561 aa12.61□□□□□ -0.39
TTC8-208ENST00000553718 RCAN1P53805 252 aa12.61□□□□□ -0.39
TTC8-208ENST00000553718 ITPK1Q13572 414 aa12.61□□□□□ -0.39
TTC8-208ENST00000553718 UBE4AQ14139 1066 aa12.61□□□□□ -0.39
TTC8-208ENST00000553718 MAP3K11Q16584 847 aa12.61□□□□□ -0.39
TTC8-208ENST00000553718 FOXD4L6Q3SYB3 417 aaPredicted RBP12.61□□□□□ -0.39
TTC8-208ENST00000553718 CPLX2Q6PUV4 134 aaKnown RBP12.61□□□□□ -0.39
TTC8-208ENST00000553718 FOXD4L3Q6VB84 417 aaPredicted RBP12.61□□□□□ -0.39
TTC8-208ENST00000553718 CCDC85AQ96PX6 553 aaPredicted RBP12.61□□□□□ -0.39
TTC8-208ENST00000553718 NUP62CLQ9H1M0 184 aa12.61□□□□□ -0.39
TTC8-208ENST00000553718 CNNM2Q9H8M5 875 aa12.61□□□□□ -0.39
TTC8-208ENST00000553718 PIH1D3Q9NQM4 214 aaKnown RBP12.61□□□□□ -0.39
TTC8-208ENST00000553718 SEMA3EO15041 775 aa12.6□□□□□ -0.39
TTC8-208ENST00000553718 CDKL5O76039 1030 aa12.6□□□□□ -0.39
TTC8-208ENST00000553718 ADAMTS2O95450 1211 aa12.6□□□□□ -0.39
TTC8-208ENST00000553718 ADD1P35611 737 aaKnown RBP12.6□□□□□ -0.39
TTC8-208ENST00000553718 LIFRP42702 1097 aa12.6□□□□□ -0.39
TTC8-208ENST00000553718 PHKA1P46020 1223 aa12.6□□□□□ -0.39
TTC8-208ENST00000553718 TERF1P54274 439 aa12.6□□□□□ -0.39
TTC8-208ENST00000553718 TTLL5Q6EMB2 1281 aa12.6□□□□□ -0.39
TTC8-208ENST00000553718 BRAPQ7Z569 592 aa12.6□□□□□ -0.39
TTC8-208ENST00000553718 SGMS1Q86VZ5 419 aa12.6□□□□□ -0.39
TTC8-208ENST00000553718 TMTC2Q8N394 836 aa12.6□□□□□ -0.39
TTC8-208ENST00000553718 AIDAQ96BJ3 306 aa12.6□□□□□ -0.39
TTC8-208ENST00000553718 KRT23Q9C075 422 aa12.6□□□□□ -0.39
TTC8-208ENST00000553718 CLSTN2Q9H4D0 955 aa12.6□□□□□ -0.39
TTC8-208ENST00000553718 GNL3LQ9NVN8 582 aaKnown RBP12.6□□□□□ -0.39
TTC8-208ENST00000553718 NIP7Q9Y221 180 aaKnown RBP eCLIP12.6□□□□□ -0.39
TTC8-208ENST00000553718 PDS5AQ29RF7 1337 aaKnown RBP12.6□□□□□ -0.39
TTC8-208ENST00000553718 ZNF532Q9HCE3 1301 aa12.6□□□□□ -0.39
TTC8-208ENST00000553718 KDM4AO75164 1064 aa12.59□□□□□ -0.39
TTC8-208ENST00000553718 PPP2R5BQ15173 497 aa12.59□□□□□ -0.39
TTC8-208ENST00000553718 SLFNL1Q499Z3 407 aa12.59□□□□□ -0.39
TTC8-208ENST00000553718 FERMT3Q86UX7 667 aa12.59□□□□□ -0.39
TTC8-208ENST00000553718 NACAP1Q9BZK3 213 aa12.59□□□□□ -0.39
TTC8-208ENST00000553718 NYXQ9GZU5 481 aa12.59□□□□□ -0.39
TTC8-208ENST00000553718 BSDC1Q9NW68 430 aaPredicted RBP12.59□□□□□ -0.39
TTC8-208ENST00000553718 RTEL1Q9NZ71 1219 aa12.59□□□□□ -0.39
TTC8-208ENST00000553718 USP25Q9UHP3 1055 aa12.59□□□□□ -0.39
TTC8-208ENST00000553718 ANGEL1Q9UNK9 670 aaKnown RBP12.59□□□□□ -0.39
TTC8-208ENST00000553718 ZKSCAN5Q9Y2L8 839 aa12.59□□□□□ -0.39
TTC8-208ENST00000553718 COL5A3P25940 1745 aaPredicted RBP12.59□□□□□ -0.39
TTC8-208ENST00000553718 ZNF804BA4D1E1 1349 aa12.59□□□□□ -0.39
TTC8-208ENST00000553718 BCORQ6W2J9 1755 aa12.58□□□□□ -0.39
TTC8-208ENST00000553718 NID2Q14112 1375 aa12.58□□□□□ -0.4
TTC8-208ENST00000553718 A0A1W2PQ27 194 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms