RNA–Protein interactions for RNA: ENST00000553649.2

SMARCE1P3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 3, humanhuman

BASIC

Gene SMARCE1P3, Length 1,231 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1P3-201ENST00000553649 CA12O43570 354 aa7.82□□□□□ -1.16
SMARCE1P3-201ENST00000553649 ECE1P42892 770 aa7.82□□□□□ -1.16
SMARCE1P3-201ENST00000553649 AMPHP49418 695 aa7.82□□□□□ -1.16
SMARCE1P3-201ENST00000553649 TRAPPC3LQ5T215 181 aa7.82□□□□□ -1.16
SMARCE1P3-201ENST00000553649 SLC17A8Q8NDX2 589 aa7.82□□□□□ -1.16
SMARCE1P3-201ENST00000553649 PIGBQ92521 554 aa7.82□□□□□ -1.16
SMARCE1P3-201ENST00000553649 KCTD15Q96SI1 283 aaPredicted RBP7.82□□□□□ -1.16
SMARCE1P3-201ENST00000553649 CARD11Q9BXL7 1154 aa7.82□□□□□ -1.16
SMARCE1P3-201ENST00000553649 KRTAP4-8Q9BYQ9 185 aa7.82□□□□□ -1.16
SMARCE1P3-201ENST00000553649 TERF2IPQ9NYB0 399 aa7.82□□□□□ -1.16
SMARCE1P3-201ENST00000553649 MAP3K19Q56UN5 1328 aa7.81□□□□□ -1.16
SMARCE1P3-201ENST00000553649 MAP2K2P36507 400 aa7.81□□□□□ -1.16
SMARCE1P3-201ENST00000553649 SRSF11Q05519 484 aaKnown RBP7.81□□□□□ -1.16
SMARCE1P3-201ENST00000553649 GRM1Q13255 1194 aa7.81□□□□□ -1.16
SMARCE1P3-201ENST00000553649 USHBP1Q8N6Y0 703 aa7.81□□□□□ -1.16
SMARCE1P3-201ENST00000553649 ZNF395Q9H8N7 513 aaPredicted RBP7.81□□□□□ -1.16
SMARCE1P3-201ENST00000553649 ADAMTSL1Q8N6G6 1762 aa7.81□□□□□ -1.16
SMARCE1P3-201ENST00000553649 A0A1W2PP64 1363 aa7.81□□□□□ -1.16
SMARCE1P3-201ENST00000553649 KDRP35968 1356 aa7.81□□□□□ -1.16
SMARCE1P3-201ENST00000553649 CUL9Q8IWT3 2517 aa7.81□□□□□ -1.16
SMARCE1P3-201ENST00000553649 CNTNAP5Q8WYK1 1306 aa7.8□□□□□ -1.16
SMARCE1P3-201ENST00000553649 PCDH11XQ9BZA7 1347 aa7.8□□□□□ -1.16
SMARCE1P3-201ENST00000553649 PCDH11YQ9BZA8 1340 aa7.8□□□□□ -1.16
SMARCE1P3-201ENST00000553649 EDC4Q6P2E9 1401 aaKnown RBP7.8□□□□□ -1.16
SMARCE1P3-201ENST00000553649 IQCA1LA6NCM1 817 aa7.8□□□□□ -1.16
SMARCE1P3-201ENST00000553649 CYP27B1O15528 508 aa7.8□□□□□ -1.16
SMARCE1P3-201ENST00000553649 HOXC9P31274 260 aa7.8□□□□□ -1.16
SMARCE1P3-201ENST00000553649 FMR1Q06787 632 aaKnown RBP eCLIP7.8□□□□□ -1.16
SMARCE1P3-201ENST00000553649 TUSC1Q2TAM9 212 aa7.8□□□□□ -1.16
SMARCE1P3-201ENST00000553649 INTS6LQ5JSJ4 861 aaKnown RBP7.8□□□□□ -1.16
SMARCE1P3-201ENST00000553649 MAP1SQ66K74 1059 aaPredicted RBP7.8□□□□□ -1.16
SMARCE1P3-201ENST00000553649 CNTROBQ8N137 903 aa7.8□□□□□ -1.16
SMARCE1P3-201ENST00000553649 KDF1Q8NAX2 398 aaPredicted RBP7.8□□□□□ -1.16
SMARCE1P3-201ENST00000553649 COG3Q96JB2 828 aa7.8□□□□□ -1.16
SMARCE1P3-201ENST00000553649 SPOCK3Q9BQ16 436 aa7.8□□□□□ -1.16
SMARCE1P3-201ENST00000553649 OCSTAMPQ9BR26 566 aa7.8□□□□□ -1.16
SMARCE1P3-201ENST00000553649 RTCBQ9Y3I0 505 aaKnown RBP7.8□□□□□ -1.16
SMARCE1P3-201ENST00000553649 RTL1A6NKG5 1358 aa7.8□□□□□ -1.16
SMARCE1P3-201ENST00000553649 NCAPD2Q15021 1401 aa7.79□□□□□ -1.16
SMARCE1P3-201ENST00000553649 TRIM66O15016 1216 aa7.79□□□□□ -1.16
SMARCE1P3-201ENST00000553649 BRPF1P55201 1214 aaPredicted RBP7.79□□□□□ -1.16
SMARCE1P3-201ENST00000553649 RRS1Q15050 365 aaKnown RBP7.79□□□□□ -1.16
SMARCE1P3-201ENST00000553649 EAPPQ56P03 285 aaPredicted RBP7.79□□□□□ -1.16
SMARCE1P3-201ENST00000553649 FOXD4L5Q5VV16 416 aaPredicted RBP7.79□□□□□ -1.16
SMARCE1P3-201ENST00000553649 POLMQ9NP87 494 aaPredicted RBP7.79□□□□□ -1.16
SMARCE1P3-201ENST00000553649 DDX21Q9NR30 783 aaKnown RBP eCLIP7.79□□□□□ -1.16
SMARCE1P3-201ENST00000553649 SMG6Q86US8 1419 aaKnown RBP7.78□□□□□ -1.16
SMARCE1P3-201ENST00000553649 SZT2Q5T011 3432 aa7.78□□□□□ -1.16
SMARCE1P3-201ENST00000553649 POLRMTO00411 1230 aaKnown RBP7.78□□□□□ -1.16
SMARCE1P3-201ENST00000553649 MSTNO14793 375 aa7.78□□□□□ -1.16
SMARCE1P3-201ENST00000553649 PROCP04070 461 aa7.78□□□□□ -1.16
SMARCE1P3-201ENST00000553649 NBPF6Q5VWK0 638 aa7.78□□□□□ -1.16
SMARCE1P3-201ENST00000553649 TTLL6Q8N841 843 aa7.78□□□□□ -1.16
SMARCE1P3-201ENST00000553649 RAPGEF4Q8WZA2 1011 aa7.78□□□□□ -1.16
SMARCE1P3-201ENST00000553649 GPKOWQ92917 476 aaPredicted RBP eCLIP7.78□□□□□ -1.16
SMARCE1P3-201ENST00000553649 NBPF4Q96M43 638 aa7.78□□□□□ -1.16
SMARCE1P3-201ENST00000553649 SLC24A3Q9HC58 644 aa7.78□□□□□ -1.16
SMARCE1P3-201ENST00000553649 TMPRSS4Q9NRS4 437 aa7.78□□□□□ -1.16
SMARCE1P3-201ENST00000553649 ZNF831Q5JPB2 1677 aa7.78□□□□□ -1.16
SMARCE1P3-201ENST00000553649 RFC4P35249 363 aa7.77□□□□□ -1.17
SMARCE1P3-201ENST00000553649 ADD1P35611 737 aaKnown RBP7.77□□□□□ -1.17
SMARCE1P3-201ENST00000553649 CTDSPL2Q05D32 466 aa7.77□□□□□ -1.17
SMARCE1P3-201ENST00000553649 CST9Q5W186 159 aa7.77□□□□□ -1.17
SMARCE1P3-201ENST00000553649 PDXDC2PQ6P474 469 aa7.77□□□□□ -1.17
SMARCE1P3-201ENST00000553649 SLC4A9Q96Q91 983 aa7.77□□□□□ -1.17
SMARCE1P3-201ENST00000553649 ARHGAP9Q9BRR9 750 aa7.77□□□□□ -1.17
SMARCE1P3-201ENST00000553649 SRP68Q9UHB9 627 aaKnown RBP7.77□□□□□ -1.17
SMARCE1P3-201ENST00000553649 ASAP1Q9ULH1 1129 aa7.77□□□□□ -1.17
SMARCE1P3-201ENST00000553649 CNTNAP4Q9C0A0 1308 aa7.77□□□□□ -1.17
SMARCE1P3-201ENST00000553649 TATP17735 454 aaPredicted RBP7.76□□□□□ -1.17
SMARCE1P3-201ENST00000553649 TM4SF1P30408 202 aa7.76□□□□□ -1.17
SMARCE1P3-201ENST00000553649 EPHX2P34913 555 aa7.76□□□□□ -1.17
SMARCE1P3-201ENST00000553649 MAP3K10Q02779 954 aa7.76□□□□□ -1.17
SMARCE1P3-201ENST00000553649 CIAPIN1Q6FI81 312 aa7.76□□□□□ -1.17
SMARCE1P3-201ENST00000553649 GGNBP2Q9H3C7 697 aa7.76□□□□□ -1.17
SMARCE1P3-201ENST00000553649 LTBP3Q9NS15 1303 aa7.76□□□□□ -1.17
SMARCE1P3-201ENST00000553649 A0A0C4DFX4 3053 aa7.75□□□□□ -1.17
SMARCE1P3-201ENST00000553649 CASP8AP2Q9UKL3 1982 aa7.75□□□□□ -1.17
SMARCE1P3-201ENST00000553649 LILRA1O75019 489 aa7.75□□□□□ -1.17
SMARCE1P3-201ENST00000553649 RPS6KA4O75676 772 aa7.75□□□□□ -1.17
SMARCE1P3-201ENST00000553649 DHX9Q08211 1270 aaKnown RBP7.75□□□□□ -1.17
SMARCE1P3-201ENST00000553649 HELBQ8NG08 1087 aaPredicted RBP7.75□□□□□ -1.17
SMARCE1P3-201ENST00000553649 SLC10A4Q96EP9 437 aa7.75□□□□□ -1.17
SMARCE1P3-201ENST00000553649 ZIC5Q96T25 663 aa7.75□□□□□ -1.17
SMARCE1P3-201ENST00000553649 HACL1Q9UJ83 578 aa7.75□□□□□ -1.17
SMARCE1P3-201ENST00000553649 ITGB4P16144 1822 aa7.75□□□□□ -1.17
SMARCE1P3-201ENST00000553649 USP42Q9H9J4 1324 aaKnown RBP7.75□□□□□ -1.17
SMARCE1P3-201ENST00000553649 TONSLQ96HA7 1378 aa7.74□□□□□ -1.17
SMARCE1P3-201ENST00000553649 ST20-MTHFSA0A0A6YYL1 179 aa7.74□□□□□ -1.17
SMARCE1P3-201ENST00000553649 HSP90AB2PQ58FF8 381 aa7.74□□□□□ -1.17
SMARCE1P3-201ENST00000553649 PNMA8AQ86V59 439 aaPredicted RBP7.74□□□□□ -1.17
SMARCE1P3-201ENST00000553649 ATG3Q9NT62 314 aa7.74□□□□□ -1.17
SMARCE1P3-201ENST00000553649 ZNF541Q9H0D2 1346 aa7.74□□□□□ -1.17
SMARCE1P3-201ENST00000553649 RGPD2P0DJD1 1756 aa7.74□□□□□ -1.17
SMARCE1P3-201ENST00000553649 INSRP06213 1382 aa7.73□□□□□ -1.17
SMARCE1P3-201ENST00000553649 GPR25O00155 361 aa7.73□□□□□ -1.17
SMARCE1P3-201ENST00000553649 TRAF5O00463 557 aa7.73□□□□□ -1.17
SMARCE1P3-201ENST00000553649 PPM1GO15355 546 aaPredicted RBP7.73□□□□□ -1.17
SMARCE1P3-201ENST00000553649 C21orf2O43822 256 aa7.73□□□□□ -1.17
SMARCE1P3-201ENST00000553649 SAPCD2Q86UD0 394 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms