RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 CWC25Q9NXE8 425 aaPredicted RBP17.92■□□□□ 0.46
PRPF39-204ENST00000553605 ZNF804BA4D1E1 1349 aa17.92■□□□□ 0.46
PRPF39-204ENST00000553605 CLRN2A0PK11 232 aa17.91■□□□□ 0.46
PRPF39-204ENST00000553605 MYO1BO43795 1136 aa17.91■□□□□ 0.46
PRPF39-204ENST00000553605 PCDHAC2Q9Y5I4 1007 aa17.91■□□□□ 0.46
PRPF39-204ENST00000553605 CTSWP56202 376 aa17.9■□□□□ 0.46
PRPF39-204ENST00000553605 KIF22Q14807 665 aa17.9■□□□□ 0.46
PRPF39-204ENST00000553605 BRI3BPQ8WY22 251 aa17.9■□□□□ 0.46
PRPF39-204ENST00000553605 SHISA4Q96DD7 197 aa17.9■□□□□ 0.46
PRPF39-204ENST00000553605 HTATIP2Q9BUP3 242 aa17.9■□□□□ 0.46
PRPF39-204ENST00000553605 VEZTQ9HBM0 779 aa17.9■□□□□ 0.46
PRPF39-204ENST00000553605 CCL15-CCL14A0A0B4J2E2 113 aa17.89■□□□□ 0.45
PRPF39-204ENST00000553605 CCL15Q16663 113 aa17.89■□□□□ 0.45
PRPF39-204ENST00000553605 TTLL11Q8NHH1 800 aa17.89■□□□□ 0.45
PRPF39-204ENST00000553605 ARHGAP39Q9C0H5 1083 aa17.89■□□□□ 0.45
PRPF39-204ENST00000553605 GREM2Q9H772 168 aa17.89■□□□□ 0.45
PRPF39-204ENST00000553605 PHAXQ9H814 394 aaKnown RBP17.89■□□□□ 0.45
PRPF39-204ENST00000553605 NR2E3Q9Y5X4 410 aa17.89■□□□□ 0.45
PRPF39-204ENST00000553605 GNRH1P01148 92 aa17.88■□□□□ 0.45
PRPF39-204ENST00000553605 KLRK1P26718 216 aa17.88■□□□□ 0.45
PRPF39-204ENST00000553605 GTF2A2P52657 109 aa17.88■□□□□ 0.45
PRPF39-204ENST00000553605 RASA3Q14644 834 aa17.88■□□□□ 0.45
PRPF39-204ENST00000553605 MTFR1Q15390 333 aa17.88■□□□□ 0.45
PRPF39-204ENST00000553605 NEUROD2Q15784 382 aa17.88■□□□□ 0.45
PRPF39-204ENST00000553605 CFAP100Q494V2 611 aa17.88■□□□□ 0.45
PRPF39-204ENST00000553605 DUSP27Q5VZP5 1158 aa17.88■□□□□ 0.45
PRPF39-204ENST00000553605 FAM43AQ8N2R8 423 aa17.88■□□□□ 0.45
PRPF39-204ENST00000553605 NKX2-3Q8TAU0 364 aa17.88■□□□□ 0.45
PRPF39-204ENST00000553605 PRMT6Q96LA8 375 aaPredicted RBP17.88■□□□□ 0.45
PRPF39-204ENST00000553605 A0A1W2PPC1 479 aa17.87■□□□□ 0.45
PRPF39-204ENST00000553605 SPDYE2BA6NHP3 402 aa17.87■□□□□ 0.45
PRPF39-204ENST00000553605 WDHD1O75717 1129 aaPredicted RBP17.87■□□□□ 0.45
PRPF39-204ENST00000553605 SPDYE6P0CI01 402 aa17.87■□□□□ 0.45
PRPF39-204ENST00000553605 PRMT2P55345 433 aa17.87■□□□□ 0.45
PRPF39-204ENST00000553605 LACTBP83111 547 aaPredicted RBP17.87■□□□□ 0.45
PRPF39-204ENST00000553605 CERS5Q8N5B7 392 aa17.87■□□□□ 0.45
PRPF39-204ENST00000553605 CD209Q9NNX6 404 aa17.87■□□□□ 0.45
PRPF39-204ENST00000553605 F8W031 263 aaPredicted RBP17.86■□□□□ 0.45
PRPF39-204ENST00000553605 SOX1O00570 391 aaPredicted RBP17.86■□□□□ 0.45
PRPF39-204ENST00000553605 TLR2O60603 784 aa17.86■□□□□ 0.45
PRPF39-204ENST00000553605 UBE2Q1Q7Z7E8 422 aa17.86■□□□□ 0.45
PRPF39-204ENST00000553605 CNKSR2Q8WXI2 1034 aa17.86■□□□□ 0.45
PRPF39-204ENST00000553605 ANKRD2Q9GZV1 360 aa17.86■□□□□ 0.45
PRPF39-204ENST00000553605 CUL9Q8IWT3 2517 aa17.86■□□□□ 0.45
PRPF39-204ENST00000553605 ZBTB7BO15156 539 aaPredicted RBP17.85■□□□□ 0.45
PRPF39-204ENST00000553605 IGHMBP2P38935 993 aaKnown RBP17.85■□□□□ 0.45
PRPF39-204ENST00000553605 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.85■□□□□ 0.45
PRPF39-204ENST00000553605 LRCH3Q96II8 777 aa17.85■□□□□ 0.45
PRPF39-204ENST00000553605 METTL22Q9BUU2 404 aaPredicted RBP17.85■□□□□ 0.45
PRPF39-204ENST00000553605 AOX1Q06278 1338 aa17.84■□□□□ 0.45
PRPF39-204ENST00000553605 GJA8P48165 433 aa17.84■□□□□ 0.45
PRPF39-204ENST00000553605 ECM29Q5VYK3 1845 aa17.84■□□□□ 0.45
PRPF39-204ENST00000553605 SPEF2Q9C093 1822 aa17.84■□□□□ 0.45
PRPF39-204ENST00000553605 GJB1P08034 283 aa17.83■□□□□ 0.44
PRPF39-204ENST00000553605 KCNJ4P48050 445 aa17.83■□□□□ 0.44
PRPF39-204ENST00000553605 RBM5P52756 815 aaKnown RBP eCLIP17.83■□□□□ 0.44
PRPF39-204ENST00000553605 MAP3K9P80192 1104 aa17.83■□□□□ 0.44
PRPF39-204ENST00000553605 TRIM35Q9UPQ4 493 aa17.83■□□□□ 0.44
PRPF39-204ENST00000553605 LAMA3Q16787 3333 aa17.82■□□□□ 0.44
PRPF39-204ENST00000553605 ECM2O94769 699 aaPredicted RBP17.82■□□□□ 0.44
PRPF39-204ENST00000553605 TNFAIP1Q13829 316 aa17.82■□□□□ 0.44
PRPF39-204ENST00000553605 VGLL4Q14135 290 aa17.82■□□□□ 0.44
PRPF39-204ENST00000553605 ZSWIM8A7E2V4 1837 aa17.82■□□□□ 0.44
PRPF39-204ENST00000553605 OTOFQ9HC10 1997 aa17.81■□□□□ 0.44
PRPF39-204ENST00000553605 DDX58O95786 925 aaKnown RBP17.81■□□□□ 0.44
PRPF39-204ENST00000553605 CCL5P13501 91 aa17.81■□□□□ 0.44
PRPF39-204ENST00000553605 GRK4P32298 578 aa17.81■□□□□ 0.44
PRPF39-204ENST00000553605 FKBP1AP62942 108 aaKnown RBP17.81■□□□□ 0.44
PRPF39-204ENST00000553605 MPHOSPH8Q99549 860 aa17.81■□□□□ 0.44
PRPF39-204ENST00000553605 ZCCHC17Q9NP64 241 aaKnown RBP17.81■□□□□ 0.44
PRPF39-204ENST00000553605 SRRDQ9UH36 339 aa17.81■□□□□ 0.44
PRPF39-204ENST00000553605 CSADQ9Y600 493 aa17.81■□□□□ 0.44
PRPF39-204ENST00000553605 CETPP11597 493 aa17.8■□□□□ 0.44
PRPF39-204ENST00000553605 HOXD10P28358 340 aa17.8■□□□□ 0.44
PRPF39-204ENST00000553605 RAET1EQ8TD07 263 aa17.8■□□□□ 0.44
PRPF39-204ENST00000553605 RNF208Q9H0X6 261 aa17.8■□□□□ 0.44
PRPF39-204ENST00000553605 STAP2Q9UGK3 403 aa17.8■□□□□ 0.44
PRPF39-204ENST00000553605 RIPOR2Q9Y4F9 1068 aa17.8■□□□□ 0.44
PRPF39-204ENST00000553605 BTBD19C9JJ37 291 aa17.79■□□□□ 0.44
PRPF39-204ENST00000553605 EVI5O60447 810 aa17.79■□□□□ 0.44
PRPF39-204ENST00000553605 IGKV5-2P06315 115 aa17.79■□□□□ 0.44
PRPF39-204ENST00000553605 PSMC4P43686 418 aa17.79■□□□□ 0.44
PRPF39-204ENST00000553605 CHRNDQ07001 517 aa17.79■□□□□ 0.44
PRPF39-204ENST00000553605 CDAN1Q8IWY9 1227 aa17.79■□□□□ 0.44
PRPF39-204ENST00000553605 CCDC146Q8IYE0 955 aa17.79■□□□□ 0.44
PRPF39-204ENST00000553605 HELBQ8NG08 1087 aaPredicted RBP17.79■□□□□ 0.44
PRPF39-204ENST00000553605 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.79■□□□□ 0.44
PRPF39-204ENST00000553605 TRIM47Q96LD4 638 aa17.79■□□□□ 0.44
PRPF39-204ENST00000553605 TEPSINQ96N21 525 aa17.79■□□□□ 0.44
PRPF39-204ENST00000553605 ZNF70Q9UC06 446 aaPredicted RBP17.79■□□□□ 0.44
PRPF39-204ENST00000553605 MAP3K2Q9Y2U5 619 aa17.79■□□□□ 0.44
PRPF39-204ENST00000553605 SPDYE5A6NIY4 337 aa17.78■□□□□ 0.44
PRPF39-204ENST00000553605 SNAP23O00161 211 aa17.78■□□□□ 0.44
PRPF39-204ENST00000553605 ELL2O00472 640 aaPredicted RBP17.78■□□□□ 0.44
PRPF39-204ENST00000553605 FARP2O94887 1054 aaPredicted RBP17.78■□□□□ 0.44
PRPF39-204ENST00000553605 IL1R1P14778 569 aa17.78■□□□□ 0.44
PRPF39-204ENST00000553605 OSBPP22059 807 aa17.78■□□□□ 0.44
PRPF39-204ENST00000553605 ITGA6P23229 1130 aa17.78■□□□□ 0.44
PRPF39-204ENST00000553605 CTGFP29279 349 aa17.78■□□□□ 0.44
PRPF39-204ENST00000553605 SPDYE2Q495Y8 402 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms