RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 CICQ96RK0 1608 aaPredicted RBP8.82□□□□□ -1
ATXN3-221ENST00000553498 PALLDQ8WX93 1383 aa8.82□□□□□ -1
ATXN3-221ENST00000553498 ABCC12Q96J65 1359 aa8.82□□□□□ -1
ATXN3-221ENST00000553498 ZPR1O75312 459 aa8.81□□□□□ -1
ATXN3-221ENST00000553498 ATP6V1AP38606 617 aa8.81□□□□□ -1
ATXN3-221ENST00000553498 TFCP2Q12800 502 aa8.81□□□□□ -1
ATXN3-221ENST00000553498 IFIT5Q13325 482 aaKnown RBP8.81□□□□□ -1
ATXN3-221ENST00000553498 AMHR2Q16671 573 aa8.81□□□□□ -1
ATXN3-221ENST00000553498 SULF1Q8IWU6 871 aa8.81□□□□□ -1
ATXN3-221ENST00000553498 ZNF34Q8IZ26 560 aa8.81□□□□□ -1
ATXN3-221ENST00000553498 RDH13Q8NBN7 331 aa8.81□□□□□ -1
ATXN3-221ENST00000553498 NKX2-3Q8TAU0 364 aa8.81□□□□□ -1
ATXN3-221ENST00000553498 SIL1Q9H173 461 aa8.81□□□□□ -1
ATXN3-221ENST00000553498 GPCPD1Q9NPB8 672 aa8.81□□□□□ -1
ATXN3-221ENST00000553498 CEP126Q9P2H0 1117 aa8.81□□□□□ -1
ATXN3-221ENST00000553498 ZBTB1Q9Y2K1 713 aa8.81□□□□□ -1
ATXN3-221ENST00000553498 PDE8AO60658 829 aa8.8□□□□□ -1
ATXN3-221ENST00000553498 CRKLP46109 303 aaKnown RBP8.8□□□□□ -1
ATXN3-221ENST00000553498 RC3H1Q5TC82 1133 aaKnown RBP8.8□□□□□ -1
ATXN3-221ENST00000553498 INTS5Q6P9B9 1019 aaKnown RBP8.8□□□□□ -1
ATXN3-221ENST00000553498 ATG9AQ7Z3C6 839 aa8.8□□□□□ -1
ATXN3-221ENST00000553498 KCNB2Q92953 911 aa8.8□□□□□ -1
ATXN3-221ENST00000553498 C8orf37Q96NL8 207 aa8.8□□□□□ -1
ATXN3-221ENST00000553498 HAUS7Q99871 368 aa8.8□□□□□ -1
ATXN3-221ENST00000553498 TM6SF1Q9BZW5 370 aa8.8□□□□□ -1
ATXN3-221ENST00000553498 LSG1Q9H089 658 aaKnown RBP8.8□□□□□ -1
ATXN3-221ENST00000553498 CCDC8Q9H0W5 538 aaPredicted RBP8.8□□□□□ -1
ATXN3-221ENST00000553498 FAM217BQ9NTX9 383 aaPredicted RBP8.8□□□□□ -1
ATXN3-221ENST00000553498 DBNLQ9UJU6 430 aaKnown RBP8.8□□□□□ -1
ATXN3-221ENST00000553498 USP21Q9UK80 565 aa8.8□□□□□ -1
ATXN3-221ENST00000553498 CHMP3Q9Y3E7 222 aa8.8□□□□□ -1
ATXN3-221ENST00000553498 CNTNAP4Q9C0A0 1308 aa8.8□□□□□ -1
ATXN3-221ENST00000553498 ARFGEF2Q9Y6D5 1785 aa8.79□□□□□ -1
ATXN3-221ENST00000553498 RTL9Q8NET4 1388 aa8.79□□□□□ -1
ATXN3-221ENST00000553498 ANKRD18BA2A2Z9 1011 aa8.79□□□□□ -1
ATXN3-221ENST00000553498 TRIM66O15016 1216 aa8.79□□□□□ -1
ATXN3-221ENST00000553498 PDIA4P13667 645 aaKnown RBP8.79□□□□□ -1
ATXN3-221ENST00000553498 ZKSCAN1P17029 563 aaPredicted RBP8.79□□□□□ -1
ATXN3-221ENST00000553498 CLCN1P35523 988 aa8.79□□□□□ -1
ATXN3-221ENST00000553498 CTSWP56202 376 aa8.79□□□□□ -1
ATXN3-221ENST00000553498 NUCB2P80303 420 aa8.79□□□□□ -1
ATXN3-221ENST00000553498 TAF7LQ5H9L4 462 aa8.79□□□□□ -1
ATXN3-221ENST00000553498 RNF20Q5VTR2 975 aa8.79□□□□□ -1
ATXN3-221ENST00000553498 INTS4Q96HW7 963 aaKnown RBP8.79□□□□□ -1
ATXN3-221ENST00000553498 ZNF512BQ96KM6 892 aaPredicted RBP8.79□□□□□ -1
ATXN3-221ENST00000553498 FSD1Q9BTV5 496 aa8.79□□□□□ -1
ATXN3-221ENST00000553498 SLKQ9H2G2 1235 aaPredicted RBP8.79□□□□□ -1
ATXN3-221ENST00000553498 HMG20BQ9P0W2 317 aa8.79□□□□□ -1
ATXN3-221ENST00000553498 TRMT112Q9UI30 125 aaKnown RBP8.79□□□□□ -1
ATXN3-221ENST00000553498 ZNF330Q9Y3S2 320 aaPredicted RBP8.79□□□□□ -1
ATXN3-221ENST00000553498 WNK3Q9BYP7 1800 aa8.79□□□□□ -1
ATXN3-221ENST00000553498 SH3TC1Q8TE82 1336 aa8.79□□□□□ -1
ATXN3-221ENST00000553498 NUP188Q5SRE5 1749 aa8.78□□□□□ -1
ATXN3-221ENST00000553498 IRS4O14654 1257 aaPredicted RBP8.78□□□□□ -1
ATXN3-221ENST00000553498 PSMA5P28066 241 aa8.78□□□□□ -1
ATXN3-221ENST00000553498 FUT2Q10981 343 aa8.78□□□□□ -1
ATXN3-221ENST00000553498 CCDC158Q5M9N0 1113 aa8.78□□□□□ -1
ATXN3-221ENST00000553498 CWC27Q6UX04 472 aaKnown RBP8.78□□□□□ -1
ATXN3-221ENST00000553498 CLEC17AQ6ZS10 378 aa8.78□□□□□ -1
ATXN3-221ENST00000553498 KBTBD3Q8NAB2 608 aa8.78□□□□□ -1
ATXN3-221ENST00000553498 TTLL11Q8NHH1 800 aa8.78□□□□□ -1
ATXN3-221ENST00000553498 KLHDC4Q8TBB5 520 aa8.78□□□□□ -1
ATXN3-221ENST00000553498 FAM89AQ96GI7 184 aa8.78□□□□□ -1
ATXN3-221ENST00000553498 GBP4Q96PP9 640 aa8.78□□□□□ -1
ATXN3-221ENST00000553498 UTP14AQ9BVJ6 771 aaKnown RBP8.78□□□□□ -1
ATXN3-221ENST00000553498 ZNF831Q5JPB2 1677 aa8.78□□□□□ -1
ATXN3-221ENST00000553498 MROH5Q6ZUA9 1318 aa8.78□□□□□ -1
ATXN3-221ENST00000553498 A0A1B0GUL7 405 aa8.77□□□□□ -1.01
ATXN3-221ENST00000553498 CAMTA2O94983 1202 aa8.77□□□□□ -1.01
ATXN3-221ENST00000553498 ZFYP08048 801 aaPredicted RBP8.77□□□□□ -1.01
ATXN3-221ENST00000553498 NEK4P51957 841 aa8.77□□□□□ -1.01
ATXN3-221ENST00000553498 CUL4AQ13619 759 aa8.77□□□□□ -1.01
ATXN3-221ENST00000553498 KRT32Q14532 448 aa8.77□□□□□ -1.01
ATXN3-221ENST00000553498 HLFQ16534 295 aa8.77□□□□□ -1.01
ATXN3-221ENST00000553498 PUS10Q3MIT2 529 aaKnown RBP8.77□□□□□ -1.01
ATXN3-221ENST00000553498 TSGA10IPQ3SY00 556 aa8.77□□□□□ -1.01
ATXN3-221ENST00000553498 MORN1Q5T089 497 aa8.77□□□□□ -1.01
ATXN3-221ENST00000553498 MAP4K1Q92918 833 aa8.77□□□□□ -1.01
ATXN3-221ENST00000553498 GJD4Q96KN9 370 aaPredicted RBP8.77□□□□□ -1.01
ATXN3-221ENST00000553498 ARXQ96QS3 562 aa8.77□□□□□ -1.01
ATXN3-221ENST00000553498 DBNDD2Q9BQY9 259 aa8.77□□□□□ -1.01
ATXN3-221ENST00000553498 ALDH8A1Q9H2A2 487 aaPredicted RBP8.77□□□□□ -1.01
ATXN3-221ENST00000553498 BOLA2Q9H3K6 86 aa8.77□□□□□ -1.01
ATXN3-221ENST00000553498 SLC24A3Q9HC58 644 aa8.77□□□□□ -1.01
ATXN3-221ENST00000553498 HELLSQ9NRZ9 838 aa8.77□□□□□ -1.01
ATXN3-221ENST00000553498 TLR7Q9NYK1 1049 aaKnown RBP8.77□□□□□ -1.01
ATXN3-221ENST00000553498 TRPC5Q9UL62 973 aaPredicted RBP8.77□□□□□ -1.01
ATXN3-221ENST00000553498 ZNF609O15014 1411 aa8.77□□□□□ -1.01
ATXN3-221ENST00000553498 CCDC171Q6TFL3 1326 aa8.77□□□□□ -1.01
ATXN3-221ENST00000553498 MED23Q9ULK4 1368 aa8.76□□□□□ -1.01
ATXN3-221ENST00000553498 MAP4K4O95819 1239 aaPredicted RBP8.76□□□□□ -1.01
ATXN3-221ENST00000553498 ITGA6P23229 1130 aa8.76□□□□□ -1.01
ATXN3-221ENST00000553498 ITPK1Q13572 414 aa8.76□□□□□ -1.01
ATXN3-221ENST00000553498 RAB3GAP1Q15042 981 aa8.76□□□□□ -1.01
ATXN3-221ENST00000553498 NECTIN1Q15223 517 aa8.76□□□□□ -1.01
ATXN3-221ENST00000553498 ANKRD1Q15327 319 aa8.76□□□□□ -1.01
ATXN3-221ENST00000553498 CCDC152Q4G0S7 254 aa8.76□□□□□ -1.01
ATXN3-221ENST00000553498 MEX3CQ5U5Q3 659 aaKnown RBP8.76□□□□□ -1.01
ATXN3-221ENST00000553498 USPL1Q5W0Q7 1092 aa8.76□□□□□ -1.01
ATXN3-221ENST00000553498 LDHAL6AQ6ZMR3 332 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms