RNA–Protein interactions for RNA: ENST00000553491.5

ATXN3-220, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-220ENST00000553491 NUDT8Q8WV74 236 aa7.05□□□□□ -1.28
ATXN3-220ENST00000553491 PIK3R5Q8WYR1 880 aa7.05□□□□□ -1.28
ATXN3-220ENST00000553491 FRRS1LQ9P0K9 344 aa7.05□□□□□ -1.28
ATXN3-220ENST00000553491 MAGI2Q86UL8 1455 aa7.04□□□□□ -1.28
ATXN3-220ENST00000553491 SETD1BQ9UPS6 1966 aaKnown RBP7.04□□□□□ -1.28
ATXN3-220ENST00000553491 MYOM3Q5VTT5 1437 aa7.04□□□□□ -1.28
ATXN3-220ENST00000553491 C1QTNF9BB2RNN3 333 aa7.04□□□□□ -1.28
ATXN3-220ENST00000553491 CPB1P15086 417 aa7.04□□□□□ -1.28
ATXN3-220ENST00000553491 SOX18P35713 384 aa7.04□□□□□ -1.28
ATXN3-220ENST00000553491 CHRNA4P43681 627 aa7.04□□□□□ -1.28
ATXN3-220ENST00000553491 CEBPAP49715 358 aaPredicted RBP7.04□□□□□ -1.28
ATXN3-220ENST00000553491 MLLT1Q03111 559 aaPredicted RBP7.04□□□□□ -1.28
ATXN3-220ENST00000553491 TTC9Q92623 222 aa7.04□□□□□ -1.28
ATXN3-220ENST00000553491 JPH1Q9HDC5 661 aaPredicted RBP7.04□□□□□ -1.28
ATXN3-220ENST00000553491 RRP7BPQ9NSQ0 103 aa7.04□□□□□ -1.28
ATXN3-220ENST00000553491 FAM13BQ9NYF5 915 aa7.04□□□□□ -1.28
ATXN3-220ENST00000553491 MTMR7Q9Y216 660 aa7.04□□□□□ -1.28
ATXN3-220ENST00000553491 ATP7AQ04656 1500 aa7.04□□□□□ -1.28
ATXN3-220ENST00000553491 ZMYM4Q5VZL5 1548 aa7.04□□□□□ -1.28
ATXN3-220ENST00000553491 ARHGEF40Q8TER5 1519 aa7.04□□□□□ -1.28
ATXN3-220ENST00000553491 MADDQ8WXG6 1647 aa7.04□□□□□ -1.28
ATXN3-220ENST00000553491 DIP2CQ9Y2E4 1556 aa7.03□□□□□ -1.28
ATXN3-220ENST00000553491 C9orf84Q5VXU9 1444 aa7.03□□□□□ -1.28
ATXN3-220ENST00000553491 UBAP1LF5GYI3 381 aa7.03□□□□□ -1.28
ATXN3-220ENST00000553491 MSTNO14793 375 aa7.03□□□□□ -1.28
ATXN3-220ENST00000553491 KIF3BO15066 747 aa7.03□□□□□ -1.28
ATXN3-220ENST00000553491 ABL1P00519 1130 aa7.03□□□□□ -1.28
ATXN3-220ENST00000553491 SPATA31C1P0DKV0 1188 aa7.03□□□□□ -1.28
ATXN3-220ENST00000553491 MTMR3Q13615 1198 aa7.03□□□□□ -1.28
ATXN3-220ENST00000553491 HFE2Q6ZVN8 426 aa7.03□□□□□ -1.28
ATXN3-220ENST00000553491 RGS22Q8NE09 1264 aa7.03□□□□□ -1.28
ATXN3-220ENST00000553491 ANO2Q9NQ90 1003 aa7.03□□□□□ -1.28
ATXN3-220ENST00000553491 KDM5CP41229 1560 aa7.03□□□□□ -1.28
ATXN3-220ENST00000553491 ADAMTSL3P82987 1691 aa7.03□□□□□ -1.28
ATXN3-220ENST00000553491 CLTCQ00610 1675 aaKnown RBP7.03□□□□□ -1.28
ATXN3-220ENST00000553491 KIAA1107Q9UPP5 1409 aa7.02□□□□□ -1.29
ATXN3-220ENST00000553491 LOC102724428A0A0B4J2F2 783 aa7.02□□□□□ -1.29
ATXN3-220ENST00000553491 FAM229AH3BQW9 127 aa7.02□□□□□ -1.29
ATXN3-220ENST00000553491 RGS9O75916 674 aaPredicted RBP7.02□□□□□ -1.29
ATXN3-220ENST00000553491 MPSTP25325 297 aa7.02□□□□□ -1.29
ATXN3-220ENST00000553491 EIF1AXP47813 144 aaKnown RBP7.02□□□□□ -1.29
ATXN3-220ENST00000553491 SIK1P57059 783 aa7.02□□□□□ -1.29
ATXN3-220ENST00000553491 ZNF211Q13398 564 aaPredicted RBP7.02□□□□□ -1.29
ATXN3-220ENST00000553491 COL13A1Q5TAT6 717 aaPredicted RBP7.02□□□□□ -1.29
ATXN3-220ENST00000553491 OR13H1Q8NG92 308 aa7.02□□□□□ -1.29
ATXN3-220ENST00000553491 NUDT16Q96DE0 195 aaKnown RBP7.02□□□□□ -1.29
ATXN3-220ENST00000553491 EGFL7Q9UHF1 273 aa7.02□□□□□ -1.29
ATXN3-220ENST00000553491 MLH3Q9UHC1 1453 aa7.02□□□□□ -1.29
ATXN3-220ENST00000553491 CROCC2H7BZ55 1655 aa7.01□□□□□ -1.29
ATXN3-220ENST00000553491 CCDC141Q6ZP82 1450 aa7.01□□□□□ -1.29
ATXN3-220ENST00000553491 A0A0A0MRY4 1105 aa7.01□□□□□ -1.29
ATXN3-220ENST00000553491 J3QW42 95 aa7.01□□□□□ -1.29
ATXN3-220ENST00000553491 ICMTO60725 284 aa7.01□□□□□ -1.29
ATXN3-220ENST00000553491 PSAPP07602 524 aa7.01□□□□□ -1.29
ATXN3-220ENST00000553491 ECM1Q16610 540 aa7.01□□□□□ -1.29
ATXN3-220ENST00000553491 CCDC27Q2M243 656 aa7.01□□□□□ -1.29
ATXN3-220ENST00000553491 NOM1Q5C9Z4 860 aaKnown RBP7.01□□□□□ -1.29
ATXN3-220ENST00000553491 GGNBP2Q9H3C7 697 aa7.01□□□□□ -1.29
ATXN3-220ENST00000553491 FGD6Q6ZV73 1430 aa7.01□□□□□ -1.29
ATXN3-220ENST00000553491 MIA2Q96PC5 1412 aa7.01□□□□□ -1.29
ATXN3-220ENST00000553491 ARHGEF5Q12774 1597 aa7□□□□□ -1.29
ATXN3-220ENST00000553491 INO80Q9ULG1 1556 aaPredicted RBP7□□□□□ -1.29
ATXN3-220ENST00000553491 A2MP01023 1474 aa7□□□□□ -1.29
ATXN3-220ENST00000553491 MBD5Q9P267 1494 aa7□□□□□ -1.29
ATXN3-220ENST00000553491 SPDYE3A6NKU9 549 aa7□□□□□ -1.29
ATXN3-220ENST00000553491 PDGFAP04085 211 aa7□□□□□ -1.29
ATXN3-220ENST00000553491 BAG6P46379 1132 aa7□□□□□ -1.29
ATXN3-220ENST00000553491 XKR5Q6UX68 686 aa7□□□□□ -1.29
ATXN3-220ENST00000553491 EDEM1Q92611 657 aa7□□□□□ -1.29
ATXN3-220ENST00000553491 SMG9Q9H0W8 520 aaKnown RBP7□□□□□ -1.29
ATXN3-220ENST00000553491 TMEM63CQ9P1W3 806 aa7□□□□□ -1.29
ATXN3-220ENST00000553491 FNDC3AQ9Y2H6 1198 aaKnown RBP7□□□□□ -1.29
ATXN3-220ENST00000553491 C3P01024 1663 aa7□□□□□ -1.29
ATXN3-220ENST00000553491 DNMT1P26358 1616 aaKnown RBP6.99□□□□□ -1.29
ATXN3-220ENST00000553491 H3BRB1 525 aa6.99□□□□□ -1.29
ATXN3-220ENST00000553491 TRIM28Q13263 835 aaKnown RBP6.99□□□□□ -1.29
ATXN3-220ENST00000553491 TRAPPC3LQ5T215 181 aa6.99□□□□□ -1.29
ATXN3-220ENST00000553491 MSL1Q68DK7 614 aa6.99□□□□□ -1.29
ATXN3-220ENST00000553491 PDE12Q6L8Q7 609 aaKnown RBP6.99□□□□□ -1.29
ATXN3-220ENST00000553491 ELMSAN1Q6PJG2 1045 aa6.99□□□□□ -1.29
ATXN3-220ENST00000553491 NSUN5Q96P11 429 aaKnown RBP6.99□□□□□ -1.29
ATXN3-220ENST00000553491 TUT1Q9H6E5 874 aaKnown RBP6.99□□□□□ -1.29
ATXN3-220ENST00000553491 ELP3Q9H9T3 547 aa6.99□□□□□ -1.29
ATXN3-220ENST00000553491 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.99□□□□□ -1.29
ATXN3-220ENST00000553491 WASHC2CQ9Y4E1 1318 aa6.99□□□□□ -1.29
ATXN3-220ENST00000553491 CEP152O94986 1710 aa6.98□□□□□ -1.29
ATXN3-220ENST00000553491 PTPRMP28827 1452 aa6.98□□□□□ -1.29
ATXN3-220ENST00000553491 FZD6O60353 706 aa6.98□□□□□ -1.29
ATXN3-220ENST00000553491 KIF4AO95239 1232 aa6.98□□□□□ -1.29
ATXN3-220ENST00000553491 CYP2E1P05181 493 aaPredicted RBP6.98□□□□□ -1.29
ATXN3-220ENST00000553491 MZF1P28698 734 aaPredicted RBP6.98□□□□□ -1.29
ATXN3-220ENST00000553491 FKBP4Q02790 459 aaKnown RBP eCLIP6.98□□□□□ -1.29
ATXN3-220ENST00000553491 GRIK4Q16099 956 aa6.98□□□□□ -1.29
ATXN3-220ENST00000553491 PRRT3Q5FWE3 981 aa6.98□□□□□ -1.29
ATXN3-220ENST00000553491 DMRTC2Q8IXT2 367 aaPredicted RBP6.98□□□□□ -1.29
ATXN3-220ENST00000553491 PLD4Q96BZ4 506 aa6.98□□□□□ -1.29
ATXN3-220ENST00000553491 ABI2Q9NYB9 513 aaPredicted RBP6.98□□□□□ -1.29
ATXN3-220ENST00000553491 CNTN3Q9P232 1028 aa6.98□□□□□ -1.29
ATXN3-220ENST00000553491 BIN2Q9UBW5 565 aaPredicted RBP6.98□□□□□ -1.29
ATXN3-220ENST00000553491 RTEL1-TNFRSF6BF6WH68 1400 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms