RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 FERMT3Q86UX7 667 aa15.19■□□□□ 0.02
SHMT2-205ENST00000553474 DNAJC10Q8IXB1 793 aa15.19■□□□□ 0.02
SHMT2-205ENST00000553474 APPBP2Q92624 585 aa15.19■□□□□ 0.02
SHMT2-205ENST00000553474 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.19■□□□□ 0.02
SHMT2-205ENST00000553474 DDX60Q8IY21 1712 aaKnown RBP15.19■□□□□ 0.02
SHMT2-205ENST00000553474 AKAP11Q9UKA4 1901 aa15.19■□□□□ 0.02
SHMT2-205ENST00000553474 SALL1Q9NSC2 1324 aa15.19■□□□□ 0.02
SHMT2-205ENST00000553474 LOC102724428A0A0B4J2F2 783 aa15.19■□□□□ 0.02
SHMT2-205ENST00000553474 DHX16O60231 1041 aaKnown RBP15.19■□□□□ 0.02
SHMT2-205ENST00000553474 ATP6V1AP38606 617 aa15.19■□□□□ 0.02
SHMT2-205ENST00000553474 SIK1P57059 783 aa15.19■□□□□ 0.02
SHMT2-205ENST00000553474 NSUN7Q8NE18 718 aaKnown RBP15.19■□□□□ 0.02
SHMT2-205ENST00000553474 FAM200AQ8TCP9 573 aa15.19■□□□□ 0.02
SHMT2-205ENST00000553474 PUS3Q9BZE2 481 aaKnown RBP15.19■□□□□ 0.02
SHMT2-205ENST00000553474 USP25Q9UHP3 1055 aa15.19■□□□□ 0.02
SHMT2-205ENST00000553474 CCNL1Q9UK58 526 aaPredicted RBP15.19■□□□□ 0.02
SHMT2-205ENST00000553474 ZNF831Q5JPB2 1677 aa15.18■□□□□ 0.02
SHMT2-205ENST00000553474 CICQ96RK0 1608 aaPredicted RBP15.18■□□□□ 0.02
SHMT2-205ENST00000553474 GIMAP6Q6P9H5 292 aa15.18■□□□□ 0.02
SHMT2-205ENST00000553474 RIPOR2Q9Y4F9 1068 aa15.18■□□□□ 0.02
SHMT2-205ENST00000553474 RREB1Q92766 1687 aa15.17■□□□□ 0.02
SHMT2-205ENST00000553474 ANKRD18BA2A2Z9 1011 aa15.17■□□□□ 0.02
SHMT2-205ENST00000553474 JAK2O60674 1132 aa15.17■□□□□ 0.02
SHMT2-205ENST00000553474 ADCY5O95622 1261 aa15.17■□□□□ 0.02
SHMT2-205ENST00000553474 FKBP4Q02790 459 aaKnown RBP eCLIP15.17■□□□□ 0.02
SHMT2-205ENST00000553474 EN1Q05925 392 aaPredicted RBP15.17■□□□□ 0.02
SHMT2-205ENST00000553474 ATP2B3Q16720 1220 aa15.17■□□□□ 0.02
SHMT2-205ENST00000553474 NLRP10Q86W26 655 aa15.17■□□□□ 0.02
SHMT2-205ENST00000553474 FAM89AQ96GI7 184 aa15.17■□□□□ 0.02
SHMT2-205ENST00000553474 SLC4A9Q96Q91 983 aa15.17■□□□□ 0.02
SHMT2-205ENST00000553474 TNMDQ9H2S6 317 aa15.17■□□□□ 0.02
SHMT2-205ENST00000553474 RIC1Q4ADV7 1423 aa15.17■□□□□ 0.02
SHMT2-205ENST00000553474 CTAGE5O15320 804 aa15.16■□□□□ 0.02
SHMT2-205ENST00000553474 CYP19A1P11511 503 aaPredicted RBP15.16■□□□□ 0.02
SHMT2-205ENST00000553474 IL6STP40189 918 aaPredicted RBP15.16■□□□□ 0.02
SHMT2-205ENST00000553474 BAG6P46379 1132 aa15.16■□□□□ 0.02
SHMT2-205ENST00000553474 CTSWP56202 376 aa15.16■□□□□ 0.02
SHMT2-205ENST00000553474 KIAA2012Q0VF49 1180 aa15.16■□□□□ 0.02
SHMT2-205ENST00000553474 DEFB132Q7Z7B7 95 aa15.16■□□□□ 0.02
SHMT2-205ENST00000553474 TTLL11Q8NHH1 800 aa15.16■□□□□ 0.02
SHMT2-205ENST00000553474 OSBP2Q969R2 916 aa15.16■□□□□ 0.02
SHMT2-205ENST00000553474 ZNF396Q96N95 335 aaPredicted RBP15.16■□□□□ 0.02
SHMT2-205ENST00000553474 CLSTN2Q9H4D0 955 aa15.16■□□□□ 0.02
SHMT2-205ENST00000553474 ARAP2Q8WZ64 1704 aa15.16■□□□□ 0.02
SHMT2-205ENST00000553474 LRP5O75197 1615 aa15.16■□□□□ 0.02
SHMT2-205ENST00000553474 PTPDC1A2A3K4 754 aa15.16■□□□□ 0.02
SHMT2-205ENST00000553474 GOLGA6L6A8MZA4 724 aa15.16■□□□□ 0.02
SHMT2-205ENST00000553474 M0R2C6 588 aa15.16■□□□□ 0.02
SHMT2-205ENST00000553474 CHGBP05060 677 aa15.16■□□□□ 0.02
SHMT2-205ENST00000553474 PDIA3P30101 505 aaKnown RBP15.16■□□□□ 0.02
SHMT2-205ENST00000553474 LDHAL6AQ6ZMR3 332 aa15.16■□□□□ 0.02
SHMT2-205ENST00000553474 DACT1Q9NYF0 836 aa15.16■□□□□ 0.02
SHMT2-205ENST00000553474 RCOR1Q9UKL0 485 aa15.16■□□□□ 0.02
SHMT2-205ENST00000553474 MYH14Q7Z406 1995 aaKnown RBP15.15■□□□□ 0.02
SHMT2-205ENST00000553474 C4BP0C0L5 1744 aa15.15■□□□□ 0.02
SHMT2-205ENST00000553474 PDE8AO60658 829 aa15.15■□□□□ 0.02
SHMT2-205ENST00000553474 LIG1P18858 919 aa15.15■□□□□ 0.02
SHMT2-205ENST00000553474 ITGA6P23229 1130 aa15.15■□□□□ 0.02
SHMT2-205ENST00000553474 ITPK1Q13572 414 aa15.15■□□□□ 0.02
SHMT2-205ENST00000553474 WASHC4Q2M389 1173 aa15.15■□□□□ 0.02
SHMT2-205ENST00000553474 METTL24Q5JXM2 366 aa15.15■□□□□ 0.02
SHMT2-205ENST00000553474 NCOA7Q8NI08 942 aa15.15■□□□□ 0.02
SHMT2-205ENST00000553474 PKNOX2Q96KN3 472 aa15.15■□□□□ 0.02
SHMT2-205ENST00000553474 CTDNEP1O95476 244 aa15.14■□□□□ 0.01
SHMT2-205ENST00000553474 UQCRFS1P1P0C7P4 283 aa15.14■□□□□ 0.01
SHMT2-205ENST00000553474 TYRO3Q06418 890 aa15.14■□□□□ 0.01
SHMT2-205ENST00000553474 APOBRQ0VD83 1088 aa15.14■□□□□ 0.01
SHMT2-205ENST00000553474 UBE3CQ15386 1083 aa15.14■□□□□ 0.01
SHMT2-205ENST00000553474 EZH2Q15910 746 aaKnown RBP15.14■□□□□ 0.01
SHMT2-205ENST00000553474 TXNRD1Q16881 649 aa15.14■□□□□ 0.01
SHMT2-205ENST00000553474 TFIP11Q9UBB9 837 aaKnown RBP15.14■□□□□ 0.01
SHMT2-205ENST00000553474 ZNF330Q9Y3S2 320 aaPredicted RBP15.14■□□□□ 0.01
SHMT2-205ENST00000553474 FAM173BQ6P4H8 233 aa15.13■□□□□ 0.01
SHMT2-205ENST00000553474 BICD2Q8TD16 824 aa15.13■□□□□ 0.01
SHMT2-205ENST00000553474 UPF1Q92900 1129 aaKnown RBP eCLIP15.13■□□□□ 0.018e-8■■■■□ 26.2
SHMT2-205ENST00000553474 ZMYM6O95789 1325 aa15.13■□□□□ 0.01
SHMT2-205ENST00000553474 MROH5Q6ZUA9 1318 aa15.13■□□□□ 0.01
SHMT2-205ENST00000553474 IRS4O14654 1257 aaPredicted RBP15.13■□□□□ 0.01
SHMT2-205ENST00000553474 ZNF213O14771 459 aa15.13■□□□□ 0.01
SHMT2-205ENST00000553474 PLSCR1O15162 318 aa15.13■□□□□ 0.01
SHMT2-205ENST00000553474 PDE8BO95263 885 aa15.13■□□□□ 0.01
SHMT2-205ENST00000553474 FGAP02671 866 aa15.13■□□□□ 0.01
SHMT2-205ENST00000553474 ADORA1P30542 326 aa15.13■□□□□ 0.01
SHMT2-205ENST00000553474 ZAP70P43403 619 aa15.13■□□□□ 0.01
SHMT2-205ENST00000553474 RALYLQ86SE5 291 aaKnown RBP15.13■□□□□ 0.01
SHMT2-205ENST00000553474 VGLL2Q8N8G2 317 aa15.13■□□□□ 0.01
SHMT2-205ENST00000553474 LINC00116Q8NCU8 138 aa15.13■□□□□ 0.01
SHMT2-205ENST00000553474 PIBF1Q8WXW3 757 aa15.13■□□□□ 0.01
SHMT2-205ENST00000553474 DDX11Q96FC9 970 aa15.13■□□□□ 0.01
SHMT2-205ENST00000553474 LRRC2Q9BYS8 371 aa15.13■□□□□ 0.01
SHMT2-205ENST00000553474 CNNM1Q9NRU3 951 aa15.13■□□□□ 0.01
SHMT2-205ENST00000553474 LRRC4BQ9NT99 713 aa15.13■□□□□ 0.01
SHMT2-205ENST00000553474 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.13■□□□□ 0.013e-7■■□□□ 13.1
SHMT2-205ENST00000553474 CARMIL3Q8ND23 1372 aa15.13■□□□□ 0.01
SHMT2-205ENST00000553474 ARID4AP29374 1257 aaPredicted RBP15.12■□□□□ 0.01
SHMT2-205ENST00000553474 ADD1P35611 737 aaKnown RBP15.12■□□□□ 0.01
SHMT2-205ENST00000553474 ADD2P35612 726 aa15.12■□□□□ 0.01
SHMT2-205ENST00000553474 SASS6Q6UVJ0 657 aa15.12■□□□□ 0.01
SHMT2-205ENST00000553474 CCDC125Q86Z20 511 aa15.12■□□□□ 0.01
SHMT2-205ENST00000553474 MB21D2Q8IYB1 491 aaPredicted RBP15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 121.6 ms