RNA–Protein interactions for RNA: ENST00000553287.5

ATXN3-217, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-217ENST00000553287 FOXD4L3Q6VB84 417 aaPredicted RBP8.75□□□□□ -1.01
ATXN3-217ENST00000553287 AEBP1Q8IUX7 1158 aa8.75□□□□□ -1.01
ATXN3-217ENST00000553287 TP53INP1Q96A56 240 aa8.75□□□□□ -1.01
ATXN3-217ENST00000553287 CCDC74AQ96AQ1 378 aa8.75□□□□□ -1.01
ATXN3-217ENST00000553287 ALKBH8Q96BT7 664 aaKnown RBP8.75□□□□□ -1.01
ATXN3-217ENST00000553287 SEMA6BQ9H3T3 888 aa8.75□□□□□ -1.01
ATXN3-217ENST00000553287 OSGEPQ9NPF4 335 aa8.75□□□□□ -1.01
ATXN3-217ENST00000553287 DUOXA2Q1HG44 320 aa8.74□□□□□ -1.01
ATXN3-217ENST00000553287 RSPO4Q2I0M5 234 aaPredicted RBP8.74□□□□□ -1.01
ATXN3-217ENST00000553287 HGSNATQ68CP4 663 aa8.74□□□□□ -1.01
ATXN3-217ENST00000553287 CCNJLQ8IV13 435 aa8.74□□□□□ -1.01
ATXN3-217ENST00000553287 TCF12Q99081 682 aa8.74□□□□□ -1.01
ATXN3-217ENST00000553287 SSBP4Q9BWG4 385 aaPredicted RBP8.74□□□□□ -1.01
ATXN3-217ENST00000553287 A0A096LPE4 126 aa8.73□□□□□ -1.01
ATXN3-217ENST00000553287 A0A1W2PPZ6 126 aa8.73□□□□□ -1.01
ATXN3-217ENST00000553287 C19orf57Q0VDD7 668 aa8.73□□□□□ -1.01
ATXN3-217ENST00000553287 SPRED3Q2MJR0 410 aa8.73□□□□□ -1.01
ATXN3-217ENST00000553287 NKAPLQ5M9Q1 402 aa8.73□□□□□ -1.01
ATXN3-217ENST00000553287 AGGF1Q8N302 714 aaeCLIP8.73□□□□□ -1.01
ATXN3-217ENST00000553287 EHD4Q9H223 541 aa8.73□□□□□ -1.01
ATXN3-217ENST00000553287 NPHS2Q9NP85 383 aa8.73□□□□□ -1.01
ATXN3-217ENST00000553287 GADD45BO75293 160 aaPredicted RBP8.72□□□□□ -1.01
ATXN3-217ENST00000553287 WISP1O95388 367 aa8.72□□□□□ -1.01
ATXN3-217ENST00000553287 GRIA4P48058 902 aa8.72□□□□□ -1.01
ATXN3-217ENST00000553287 ACAD11Q709F0 780 aa8.72□□□□□ -1.01
ATXN3-217ENST00000553287 ZSCAN29Q8IWY8 852 aaPredicted RBP8.72□□□□□ -1.01
ATXN3-217ENST00000553287 MEGF10Q96KG7 1140 aa8.72□□□□□ -1.01
ATXN3-217ENST00000553287 ADAM11O75078 769 aa8.71□□□□□ -1.02
ATXN3-217ENST00000553287 NLRP12P59046 1061 aa8.71□□□□□ -1.02
ATXN3-217ENST00000553287 DSC3Q14574 896 aa8.71□□□□□ -1.02
ATXN3-217ENST00000553287 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.71□□□□□ -1.02
ATXN3-217ENST00000553287 EPS8L3Q8TE67 593 aaKnown RBP8.71□□□□□ -1.02
ATXN3-217ENST00000553287 FOXD4L4Q8WXT5 416 aaPredicted RBP8.71□□□□□ -1.02
ATXN3-217ENST00000553287 TREHO43280 583 aa8.7□□□□□ -1.02
ATXN3-217ENST00000553287 ESRRAP11474 423 aaPredicted RBP8.7□□□□□ -1.02
ATXN3-217ENST00000553287 GLB1P16278 677 aa8.7□□□□□ -1.02
ATXN3-217ENST00000553287 KIAA1211Q6ZU35 1233 aa8.7□□□□□ -1.02
ATXN3-217ENST00000553287 DZIP1LQ8IYY4 767 aaKnown RBP8.7□□□□□ -1.02
ATXN3-217ENST00000553287 UBASH3BQ8TF42 649 aa8.7□□□□□ -1.02
ATXN3-217ENST00000553287 ABCC9O60706 1549 aa8.7□□□□□ -1.02
ATXN3-217ENST00000553287 H2AFB1P0C5Y9 115 aa8.69□□□□□ -1.02
ATXN3-217ENST00000553287 H2AFB2P0C5Z0 115 aa8.69□□□□□ -1.02
ATXN3-217ENST00000553287 ZNF423Q2M1K9 1284 aa8.69□□□□□ -1.02
ATXN3-217ENST00000553287 CLEC4MQ9H2X3 399 aaPredicted RBP8.69□□□□□ -1.02
ATXN3-217ENST00000553287 DYRK3O43781 588 aa8.68□□□□□ -1.02
ATXN3-217ENST00000553287 PCDH1Q08174 1060 aa8.68□□□□□ -1.02
ATXN3-217ENST00000553287 ASB16Q96NS5 453 aa8.68□□□□□ -1.02
ATXN3-217ENST00000553287 SOX17Q9H6I2 414 aaPredicted RBP8.68□□□□□ -1.02
ATXN3-217ENST00000553287 NLRP2Q9NX02 1062 aa8.68□□□□□ -1.02
ATXN3-217ENST00000553287 PNMA6FA0A0J9YX94 578 aa8.67□□□□□ -1.02
ATXN3-217ENST00000553287 GSTM4Q03013 218 aa8.67□□□□□ -1.02
ATXN3-217ENST00000553287 Q6ZS46 218 aa8.67□□□□□ -1.02
ATXN3-217ENST00000553287 UBL7Q96S82 380 aaPredicted RBP8.67□□□□□ -1.02
ATXN3-217ENST00000553287 PPP4R2Q9NY27 417 aa8.67□□□□□ -1.02
ATXN3-217ENST00000553287 TMEM238LA0A1B0GVL6 79 aa8.66□□□□□ -1.02
ATXN3-217ENST00000553287 MAPK8P45983 427 aa8.66□□□□□ -1.02
ATXN3-217ENST00000553287 GRM2Q14416 872 aa8.66□□□□□ -1.02
ATXN3-217ENST00000553287 ENOX2Q16206 610 aaKnown RBP8.66□□□□□ -1.02
ATXN3-217ENST00000553287 PI16Q6UXB8 463 aa8.66□□□□□ -1.02
ATXN3-217ENST00000553287 RUSC1Q9BVN2 902 aa8.66□□□□□ -1.02
ATXN3-217ENST00000553287 TRAK1Q9UPV9 953 aa8.66□□□□□ -1.02
ATXN3-217ENST00000553287 EIF4EBP3O60516 100 aaPredicted RBP8.65□□□□□ -1.02
ATXN3-217ENST00000553287 ITPKAP23677 461 aa8.65□□□□□ -1.02
ATXN3-217ENST00000553287 ITGB7P26010 798 aa8.65□□□□□ -1.02
ATXN3-217ENST00000553287 USP26Q9BXU7 913 aa8.65□□□□□ -1.02
ATXN3-217ENST00000553287 CEP41Q9BYV8 373 aa8.65□□□□□ -1.02
ATXN3-217ENST00000553287 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.64□□□□□ -1.03
ATXN3-217ENST00000553287 PRPF40BQ6NWY9 871 aaKnown RBP8.64□□□□□ -1.03
ATXN3-217ENST00000553287 GLIS3Q8NEA6 775 aa8.64□□□□□ -1.03
ATXN3-217ENST00000553287 RNF208Q9H0X6 261 aa8.64□□□□□ -1.03
ATXN3-217ENST00000553287 ZNF576Q9H609 170 aa8.64□□□□□ -1.03
ATXN3-217ENST00000553287 ABCB6Q9NP58 842 aa8.64□□□□□ -1.03
ATXN3-217ENST00000553287 MEGF11A6BM72 1044 aa8.63□□□□□ -1.03
ATXN3-217ENST00000553287 PTPN12Q05209 780 aaKnown RBP8.63□□□□□ -1.03
ATXN3-217ENST00000553287 PRSS36Q5K4E3 855 aa8.63□□□□□ -1.03
ATXN3-217ENST00000553287 DDX54Q8TDD1 881 aaKnown RBP8.63□□□□□ -1.03
ATXN3-217ENST00000553287 BCO2Q9BYV7 579 aa8.63□□□□□ -1.03
ATXN3-217ENST00000553287 LOC100289279A0A1B0GTE1 492 aa8.62□□□□□ -1.03
ATXN3-217ENST00000553287 SART1O43290 800 aaKnown RBP8.62□□□□□ -1.03
ATXN3-217ENST00000553287 DLGAP3O95886 979 aa8.62□□□□□ -1.03
ATXN3-217ENST00000553287 FMR1Q06787 632 aaKnown RBP eCLIP8.62□□□□□ -1.03
ATXN3-217ENST00000553287 EXOSC6Q5RKV6 272 aaKnown RBP8.62□□□□□ -1.03
ATXN3-217ENST00000553287 NUTM2GQ5VZR2 741 aa8.62□□□□□ -1.03
ATXN3-217ENST00000553287 PRR23CQ6ZRP0 262 aa8.62□□□□□ -1.03
ATXN3-217ENST00000553287 SND1Q7KZF4 910 aaKnown RBP eCLIP8.62□□□□□ -1.03
ATXN3-217ENST00000553287 WWC3Q9ULE0 1092 aa8.62□□□□□ -1.03
ATXN3-217ENST00000553287 B3GALT4O96024 378 aa8.61□□□□□ -1.03
ATXN3-217ENST00000553287 CYP11A1P05108 521 aa8.61□□□□□ -1.03
ATXN3-217ENST00000553287 FCGRTP55899 365 aa8.61□□□□□ -1.03
ATXN3-217ENST00000553287 ANKRD34AQ69YU3 496 aa8.61□□□□□ -1.03
ATXN3-217ENST00000553287 NXPE4Q6UWF7 544 aa8.61□□□□□ -1.03
ATXN3-217ENST00000553287 DTHD1Q6ZMT9 781 aa8.61□□□□□ -1.03
ATXN3-217ENST00000553287 C12orf50Q8NA57 414 aaPredicted RBP8.61□□□□□ -1.03
ATXN3-217ENST00000553287 FAM46AQ96IP4 442 aaKnown RBP8.61□□□□□ -1.03
ATXN3-217ENST00000553287 SETDB2Q96T68 719 aa8.61□□□□□ -1.03
ATXN3-217ENST00000553287 MAOBP27338 520 aa8.6□□□□□ -1.03
ATXN3-217ENST00000553287 ZNF157P51786 506 aaPredicted RBP8.6□□□□□ -1.03
ATXN3-217ENST00000553287 POU4F3Q15319 338 aa8.6□□□□□ -1.03
ATXN3-217ENST00000553287 RPS26P11Q5JNZ5 115 aaPredicted RBP8.6□□□□□ -1.03
ATXN3-217ENST00000553287 ALG1LQ6GMV1 187 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms