RNA–Protein interactions for RNA: ENST00000553217.5

TMEM106C-221, Transcript of transmembrane protein 106C, humanhuman

TSL 3

Gene TMEM106C, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-221ENST00000553217 MMP14P50281 582 aa6.56□□□□□ -1.36
TMEM106C-221ENST00000553217 HLFQ16534 295 aa6.56□□□□□ -1.36
TMEM106C-221ENST00000553217 COL13A1Q5TAT6 717 aaPredicted RBP6.56□□□□□ -1.36
TMEM106C-221ENST00000553217 NBPF10Q6P3W6 841 aaKnown RBP6.56□□□□□ -1.36
TMEM106C-221ENST00000553217 ZNF710Q8N1W2 664 aa6.56□□□□□ -1.36
TMEM106C-221ENST00000553217 NBPF15Q8N660 670 aa6.56□□□□□ -1.36
TMEM106C-221ENST00000553217 RBM46Q8TBY0 533 aaKnown RBP6.56□□□□□ -1.36
TMEM106C-221ENST00000553217 CFAP45Q9UL16 551 aa6.56□□□□□ -1.36
TMEM106C-221ENST00000553217 CEMIPQ8WUJ3 1361 aa6.56□□□□□ -1.36
TMEM106C-221ENST00000553217 EFCAB8A8MWE9 144 aa6.55□□□□□ -1.36
TMEM106C-221ENST00000553217 ZSCAN12O43309 604 aa6.55□□□□□ -1.36
TMEM106C-221ENST00000553217 DDNO94850 711 aaPredicted RBP6.55□□□□□ -1.36
TMEM106C-221ENST00000553217 ANXA1P04083 346 aa6.55□□□□□ -1.36
TMEM106C-221ENST00000553217 ZSCAN22P10073 491 aaPredicted RBP6.55□□□□□ -1.36
TMEM106C-221ENST00000553217 LMNB1P20700 586 aa6.55□□□□□ -1.36
TMEM106C-221ENST00000553217 NCBP1Q09161 790 aaKnown RBP6.55□□□□□ -1.36
TMEM106C-221ENST00000553217 TPD52L1Q16890 204 aaPredicted RBP6.55□□□□□ -1.36
TMEM106C-221ENST00000553217 PRPF40BQ6NWY9 871 aaKnown RBP6.55□□□□□ -1.36
TMEM106C-221ENST00000553217 DRC7Q8IY82 874 aa6.55□□□□□ -1.36
TMEM106C-221ENST00000553217 TMEM57Q8N5G2 664 aa6.55□□□□□ -1.36
TMEM106C-221ENST00000553217 ANKRD44Q8N8A2 993 aa6.55□□□□□ -1.36
TMEM106C-221ENST00000553217 CNBD1Q8NA66 436 aa6.55□□□□□ -1.36
TMEM106C-221ENST00000553217 SSH1Q8WYL5 1049 aa6.55□□□□□ -1.36
TMEM106C-221ENST00000553217 KLRG1Q96E93 195 aa6.55□□□□□ -1.36
TMEM106C-221ENST00000553217 TMX3Q96JJ7 454 aa6.55□□□□□ -1.36
TMEM106C-221ENST00000553217 TM6SF1Q9BZW5 370 aa6.55□□□□□ -1.36
TMEM106C-221ENST00000553217 SPINK5Q9NQ38 1064 aaPredicted RBP6.55□□□□□ -1.36
TMEM106C-221ENST00000553217 NOB1Q9ULX3 412 aaKnown RBP6.55□□□□□ -1.36
TMEM106C-221ENST00000553217 IQSEC3Q9UPP2 1182 aaPredicted RBP6.55□□□□□ -1.36
TMEM106C-221ENST00000553217 ABCC12Q96J65 1359 aa6.55□□□□□ -1.36
TMEM106C-221ENST00000553217 PHLPP2Q6ZVD8 1323 aa6.54□□□□□ -1.36
TMEM106C-221ENST00000553217 ZNF541Q9H0D2 1346 aa6.54□□□□□ -1.36
TMEM106C-221ENST00000553217 A0A087WZG4 1122 aa6.54□□□□□ -1.36
TMEM106C-221ENST00000553217 CCDC196A0A1B0GTZ2 297 aa6.54□□□□□ -1.36
TMEM106C-221ENST00000553217 GLTPD2A6NH11 291 aa6.54□□□□□ -1.36
TMEM106C-221ENST00000553217 TMCO5BA8MYB1 307 aa6.54□□□□□ -1.36
TMEM106C-221ENST00000553217 RPS6KA5O75582 802 aa6.54□□□□□ -1.36
TMEM106C-221ENST00000553217 APPP05067 770 aa6.54□□□□□ -1.36
TMEM106C-221ENST00000553217 GNAI3P08754 354 aa6.54□□□□□ -1.36
TMEM106C-221ENST00000553217 MYL6BP14649 208 aa6.54□□□□□ -1.36
TMEM106C-221ENST00000553217 GPTP24298 496 aa6.54□□□□□ -1.36
TMEM106C-221ENST00000553217 PSMA5P28066 241 aa6.54□□□□□ -1.36
TMEM106C-221ENST00000553217 CASQ1P31415 396 aa6.54□□□□□ -1.36
TMEM106C-221ENST00000553217 IL6STP40189 918 aaPredicted RBP6.54□□□□□ -1.36
TMEM106C-221ENST00000553217 CCT4P50991 539 aaKnown RBP6.54□□□□□ -1.36
TMEM106C-221ENST00000553217 NEK4P51957 841 aa6.54□□□□□ -1.36
TMEM106C-221ENST00000553217 IRX5P78411 483 aaPredicted RBP6.54□□□□□ -1.36
TMEM106C-221ENST00000553217 ERFEQ4G0M1 354 aa6.54□□□□□ -1.36
TMEM106C-221ENST00000553217 CCDC158Q5M9N0 1113 aa6.54□□□□□ -1.36
TMEM106C-221ENST00000553217 ICE2Q659A1 982 aa6.54□□□□□ -1.36
TMEM106C-221ENST00000553217 TTLL7Q6ZT98 887 aa6.54□□□□□ -1.36
TMEM106C-221ENST00000553217 NBPF5PQ86XG9 351 aaPredicted RBP6.54□□□□□ -1.36
TMEM106C-221ENST00000553217 PLEKHM2Q8IWE5 1019 aa6.54□□□□□ -1.36
TMEM106C-221ENST00000553217 TDRD7Q8NHU6 1098 aaKnown RBP6.54□□□□□ -1.36
TMEM106C-221ENST00000553217 NECTIN2Q92692 538 aa6.54□□□□□ -1.36
TMEM106C-221ENST00000553217 CEP89Q96ST8 783 aa6.54□□□□□ -1.36
TMEM106C-221ENST00000553217 SETDB2Q96T68 719 aa6.54□□□□□ -1.36
TMEM106C-221ENST00000553217 NCAPGQ9BPX3 1015 aa6.54□□□□□ -1.36
TMEM106C-221ENST00000553217 NUP62CLQ9H1M0 184 aa6.54□□□□□ -1.36
TMEM106C-221ENST00000553217 ZSCAN16Q9H4T2 348 aaPredicted RBP6.54□□□□□ -1.36
TMEM106C-221ENST00000553217 ZNF277Q9NRM2 450 aaPredicted RBP6.54□□□□□ -1.36
TMEM106C-221ENST00000553217 LIMCH1Q9UPQ0 1083 aa6.54□□□□□ -1.36
TMEM106C-221ENST00000553217 SMC3Q9UQE7 1217 aa6.54□□□□□ -1.36
TMEM106C-221ENST00000553217 NIP7Q9Y221 180 aaKnown RBP eCLIP6.54□□□□□ -1.36
TMEM106C-221ENST00000553217 RRP7AQ9Y3A4 280 aaKnown RBP6.54□□□□□ -1.36
TMEM106C-221ENST00000553217 COL4A5P29400 1685 aa6.54□□□□□ -1.36
TMEM106C-221ENST00000553217 DICER1Q9UPY3 1922 aaKnown RBP6.54□□□□□ -1.36
TMEM106C-221ENST00000553217 KDM3BQ7LBC6 1761 aa6.54□□□□□ -1.36
TMEM106C-221ENST00000553217 CEP350Q5VT06 3117 aa6.53□□□□□ -1.36
TMEM106C-221ENST00000553217 PES1O00541 588 aaKnown RBP6.53□□□□□ -1.36
TMEM106C-221ENST00000553217 CBFA2T2O43439 604 aa6.53□□□□□ -1.36
TMEM106C-221ENST00000553217 STX6O43752 255 aa6.53□□□□□ -1.36
TMEM106C-221ENST00000553217 RAB11FIP3O75154 756 aa6.53□□□□□ -1.36
TMEM106C-221ENST00000553217 ZKSCAN1P17029 563 aaPredicted RBP6.53□□□□□ -1.36
TMEM106C-221ENST00000553217 ERCC3P19447 782 aa6.53□□□□□ -1.36
TMEM106C-221ENST00000553217 GTF2A1P52655 376 aaPredicted RBP6.53□□□□□ -1.36
TMEM106C-221ENST00000553217 ST5P78524 1137 aa6.53□□□□□ -1.36
TMEM106C-221ENST00000553217 LMNB2Q03252 620 aa6.53□□□□□ -1.36
TMEM106C-221ENST00000553217 EXOSC9Q06265 439 aaKnown RBP6.53□□□□□ -1.36
TMEM106C-221ENST00000553217 FMR1Q06787 632 aaKnown RBP eCLIP6.53□□□□□ -1.36
TMEM106C-221ENST00000553217 HSP90B2PQ58FF3 399 aa6.53□□□□□ -1.36
TMEM106C-221ENST00000553217 SWT1Q5T5J6 900 aaKnown RBP6.53□□□□□ -1.36
TMEM106C-221ENST00000553217 RBM43Q6ZSC3 357 aaKnown RBP6.53□□□□□ -1.36
TMEM106C-221ENST00000553217 C3orf67Q6ZVT6 689 aa6.53□□□□□ -1.36
TMEM106C-221ENST00000553217 SKAP1Q86WV1 359 aa6.53□□□□□ -1.36
TMEM106C-221ENST00000553217 SUGP1Q8IWZ8 645 aaKnown RBP6.53□□□□□ -1.36
TMEM106C-221ENST00000553217 GPR161Q8N6U8 529 aaKnown RBP6.53□□□□□ -1.36
TMEM106C-221ENST00000553217 SMC1BQ8NDV3 1235 aa6.53□□□□□ -1.36
TMEM106C-221ENST00000553217 UBXN4Q92575 508 aa6.53□□□□□ -1.36
TMEM106C-221ENST00000553217 CCDC34Q96HJ3 373 aa6.53□□□□□ -1.36
TMEM106C-221ENST00000553217 MPHOSPH8Q99549 860 aa6.53□□□□□ -1.36
TMEM106C-221ENST00000553217 BRIP1Q9BX63 1249 aa6.53□□□□□ -1.36
TMEM106C-221ENST00000553217 TRIM5Q9C035 493 aa6.53□□□□□ -1.36
TMEM106C-221ENST00000553217 ALDH8A1Q9H2A2 487 aaPredicted RBP6.53□□□□□ -1.36
TMEM106C-221ENST00000553217 ZBTB3Q9H5J0 574 aa6.53□□□□□ -1.36
TMEM106C-221ENST00000553217 L2HGDHQ9H9P8 463 aa6.53□□□□□ -1.36
TMEM106C-221ENST00000553217 LAMB4A4D0S4 1761 aa6.53□□□□□ -1.36
TMEM106C-221ENST00000553217 ARFGEF2Q9Y6D5 1785 aa6.53□□□□□ -1.36
TMEM106C-221ENST00000553217 TTC41PQ6P2S7 1318 aa6.52□□□□□ -1.37
TMEM106C-221ENST00000553217 BECN2A8MW95 431 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms