RNA–Protein interactions for RNA: ENST00000553189.5

TMTC1-209, Transcript of transmembrane and tetratricopeptide repeat containing 1, humanhuman

TSL 2

Gene TMTC1, Length 5,547 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMTC1-209ENST00000553189 IL15P40933 162 aaPredicted RBP8.4□□□□□ -1.06
TMTC1-209ENST00000553189 PTPN14Q15678 1187 aa8.4□□□□□ -1.06
TMTC1-209ENST00000553189 TAX1BP1Q86VP1 789 aa8.4□□□□□ -1.06
TMTC1-209ENST00000553189 FAM177A1Q8N128 213 aaPredicted RBP8.4□□□□□ -1.06
TMTC1-209ENST00000553189 ERO1AQ96HE7 468 aa8.4□□□□□ -1.06
TMTC1-209ENST00000553189 BRIP1Q9BX63 1249 aa8.4□□□□□ -1.06
TMTC1-209ENST00000553189 CEP170BQ9Y4F5 1589 aaPredicted RBP8.4□□□□□ -1.06
TMTC1-209ENST00000553189 USP17L3A6NCW0 530 aa8.4□□□□□ -1.06
TMTC1-209ENST00000553189 USP17L4A6NCW7 530 aa8.4□□□□□ -1.06
TMTC1-209ENST00000553189 TCP10L2B9ZVM9 353 aa8.4□□□□□ -1.06
TMTC1-209ENST00000553189 CTCFP49711 727 aaPredicted RBP8.4□□□□□ -1.06
TMTC1-209ENST00000553189 USP17L1Q7RTZ2 530 aa8.4□□□□□ -1.06
TMTC1-209ENST00000553189 IARSP41252 1262 aaKnown RBP8.4□□□□□ -1.07
TMTC1-209ENST00000553189 RSPH3Q86UC2 560 aa8.4□□□□□ -1.07
TMTC1-209ENST00000553189 KIF18AQ8NI77 898 aa8.4□□□□□ -1.07
TMTC1-209ENST00000553189 UPF3BQ9BZI7 483 aaKnown RBP8.4□□□□□ -1.07
TMTC1-209ENST00000553189 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.4□□□□□ -1.07
TMTC1-209ENST00000553189 NARFQ9UHQ1 456 aa8.4□□□□□ -1.07
TMTC1-209ENST00000553189 LEMD3Q9Y2U8 911 aa8.4□□□□□ -1.07
TMTC1-209ENST00000553189 ZBBXA8MT70 800 aa8.4□□□□□ -1.07
TMTC1-209ENST00000553189 KBTBD13C9JR72 458 aa8.4□□□□□ -1.07
TMTC1-209ENST00000553189 ZSCAN12O43309 604 aa8.4□□□□□ -1.07
TMTC1-209ENST00000553189 CDKL5O76039 1030 aa8.4□□□□□ -1.07
TMTC1-209ENST00000553189 A1BGP04217 495 aa8.4□□□□□ -1.07
TMTC1-209ENST00000553189 ME1P48163 572 aa8.4□□□□□ -1.07
TMTC1-209ENST00000553189 ZSCAN31Q96LW9 406 aaPredicted RBP8.4□□□□□ -1.07
TMTC1-209ENST00000553189 PRDM5Q9NQX1 630 aaPredicted RBP8.4□□□□□ -1.07
TMTC1-209ENST00000553189 ROBO2Q9HCK4 1378 aa8.39□□□□□ -1.07
TMTC1-209ENST00000553189 SPATA32Q96LK8 384 aa8.39□□□□□ -1.07
TMTC1-209ENST00000553189 ERBB4Q15303 1308 aa8.39□□□□□ -1.07
TMTC1-209ENST00000553189 PI4KAP2A4QPH2 592 aa8.39□□□□□ -1.07
TMTC1-209ENST00000553189 DYNC1I1O14576 645 aa8.39□□□□□ -1.07
TMTC1-209ENST00000553189 KCNA4P22459 653 aa8.39□□□□□ -1.07
TMTC1-209ENST00000553189 KCNQ4P56696 695 aa8.39□□□□□ -1.07
TMTC1-209ENST00000553189 CEBPZQ03701 1054 aaKnown RBP8.39□□□□□ -1.07
TMTC1-209ENST00000553189 TBC1D10BQ4KMP7 808 aaPredicted RBP8.39□□□□□ -1.07
TMTC1-209ENST00000553189 PI4KAP1Q8N8J0 262 aa8.39□□□□□ -1.07
TMTC1-209ENST00000553189 ZMYND15Q9H091 742 aa8.39□□□□□ -1.07
TMTC1-209ENST00000553189 RTL1A6NKG5 1358 aa8.39□□□□□ -1.07
TMTC1-209ENST00000553189 CCDC196A0A1B0GTZ2 297 aa8.39□□□□□ -1.07
TMTC1-209ENST00000553189 DPEP1P16444 411 aa8.39□□□□□ -1.07
TMTC1-209ENST00000553189 MAP3K11Q16584 847 aa8.39□□□□□ -1.07
TMTC1-209ENST00000553189 BABAM1Q9NWV8 329 aa8.39□□□□□ -1.07
TMTC1-209ENST00000553189 CFAP45Q9UL16 551 aa8.39□□□□□ -1.07
TMTC1-209ENST00000553189 AATKQ6ZMQ8 1374 aa8.39□□□□□ -1.07
TMTC1-209ENST00000553189 PNPLA6Q8IY17 1366 aa8.39□□□□□ -1.07
TMTC1-209ENST00000553189 ZFYVE9O95405 1425 aa8.39□□□□□ -1.07
TMTC1-209ENST00000553189 ANKRD62A6NC57 917 aa8.39□□□□□ -1.07
TMTC1-209ENST00000553189 TNPO2O14787 897 aaKnown RBP8.39□□□□□ -1.07
TMTC1-209ENST00000553189 CA12O43570 354 aa8.39□□□□□ -1.07
TMTC1-209ENST00000553189 FLIIQ13045 1269 aa8.39□□□□□ -1.07
TMTC1-209ENST00000553189 ARHGAP29Q52LW3 1261 aa8.39□□□□□ -1.07
TMTC1-209ENST00000553189 ZHX3Q9H4I2 956 aa8.39□□□□□ -1.07
TMTC1-209ENST00000553189 DDX21Q9NR30 783 aaKnown RBP eCLIP8.39□□□□□ -1.07
TMTC1-209ENST00000553189 CHPF2Q9P2E5 772 aa8.39□□□□□ -1.07
TMTC1-209ENST00000553189 CARMIL3Q8ND23 1372 aa8.39□□□□□ -1.07
TMTC1-209ENST00000553189 MADDQ8WXG6 1647 aa8.39□□□□□ -1.07
TMTC1-209ENST00000553189 RNF17Q9BXT8 1623 aaKnown RBP8.39□□□□□ -1.07
TMTC1-209ENST00000553189 SOS1Q07889 1333 aaPredicted RBP8.39□□□□□ -1.07
TMTC1-209ENST00000553189 EPB41L2O43491 1005 aaKnown RBP8.38□□□□□ -1.07
TMTC1-209ENST00000553189 RAB11FIP3O75154 756 aa8.38□□□□□ -1.07
TMTC1-209ENST00000553189 MTHFSDQ2M296 383 aaKnown RBP8.38□□□□□ -1.07
TMTC1-209ENST00000553189 MFSD14BQ5SR56 506 aa8.38□□□□□ -1.07
TMTC1-209ENST00000553189 CLEC4GQ6UXB4 293 aa8.38□□□□□ -1.07
TMTC1-209ENST00000553189 WASF1Q92558 559 aa8.38□□□□□ -1.07
TMTC1-209ENST00000553189 LRFN2Q9ULH4 789 aa8.38□□□□□ -1.07
TMTC1-209ENST00000553189 ADAMTS8Q9UP79 889 aa8.38□□□□□ -1.07
TMTC1-209ENST00000553189 GTPBP6O43824 516 aaPredicted RBP8.38□□□□□ -1.07
TMTC1-209ENST00000553189 EPHX2P34913 555 aa8.38□□□□□ -1.07
TMTC1-209ENST00000553189 LARP1BQ659C4 914 aaKnown RBP8.38□□□□□ -1.07
TMTC1-209ENST00000553189 CHADLQ6NUI6 762 aa8.38□□□□□ -1.07
TMTC1-209ENST00000553189 LMBR1LQ6UX01 489 aa8.38□□□□□ -1.07
TMTC1-209ENST00000553189 SMARCC2Q8TAQ2 1214 aa8.38□□□□□ -1.07
TMTC1-209ENST00000553189 CDCA7LQ96GN5 454 aa8.38□□□□□ -1.07
TMTC1-209ENST00000553189 ASAP1Q9ULH1 1129 aa8.38□□□□□ -1.07
TMTC1-209ENST00000553189 SYCE3A1L190 88 aa8.38□□□□□ -1.07
TMTC1-209ENST00000553189 POTEB2H3BUK9 544 aa8.38□□□□□ -1.07
TMTC1-209ENST00000553189 BCAMP50895 628 aa8.38□□□□□ -1.07
TMTC1-209ENST00000553189 NCAPG2Q86XI2 1143 aa8.38□□□□□ -1.07
TMTC1-209ENST00000553189 REM2Q8IYK8 340 aaPredicted RBP8.38□□□□□ -1.07
TMTC1-209ENST00000553189 KIF1BPQ96EK5 621 aa8.38□□□□□ -1.07
TMTC1-209ENST00000553189 ZNF277Q9NRM2 450 aaPredicted RBP8.38□□□□□ -1.07
TMTC1-209ENST00000553189 STX8Q9UNK0 236 aa8.38□□□□□ -1.07
TMTC1-209ENST00000553189 DCCP43146 1447 aa8.38□□□□□ -1.07
TMTC1-209ENST00000553189 CCDC150Q8NCX0 1101 aa8.38□□□□□ -1.07
TMTC1-209ENST00000553189 USP40Q9NVE5 1235 aa8.38□□□□□ -1.07
TMTC1-209ENST00000553189 ERBB3P21860 1342 aa8.38□□□□□ -1.07
TMTC1-209ENST00000553189 CATIPQ7Z7H3 387 aa8.37□□□□□ -1.07
TMTC1-209ENST00000553189 RAB34Q9BZG1 259 aa8.37□□□□□ -1.07
TMTC1-209ENST00000553189 FTOQ9C0B1 505 aaKnown RBP eCLIP8.37□□□□□ -1.07
TMTC1-209ENST00000553189 SOS2Q07890 1332 aaPredicted RBP8.37□□□□□ -1.07
TMTC1-209ENST00000553189 MAGEB6P1A0A0J9YX57 407 aa8.37□□□□□ -1.07
TMTC1-209ENST00000553189 SFPQP23246 707 aaKnown RBP eCLIP8.37□□□□□ -1.07
TMTC1-209ENST00000553189 GBP2P32456 591 aaPredicted RBP8.37□□□□□ -1.07
TMTC1-209ENST00000553189 KIF4BQ2VIQ3 1234 aa8.37□□□□□ -1.07
TMTC1-209ENST00000553189 FASTKD5Q7L8L6 764 aaKnown RBP8.37□□□□□ -1.07
TMTC1-209ENST00000553189 TAF4BQ92750 862 aa8.37□□□□□ -1.07
TMTC1-209ENST00000553189 TIGD1Q96MW7 591 aa8.37□□□□□ -1.07
TMTC1-209ENST00000553189 ZNRF3Q9ULT6 936 aa8.37□□□□□ -1.07
TMTC1-209ENST00000553189 NEMFO60524 1076 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms