RNA–Protein interactions for RNA: ENST00000552875.2

PRKCH-203, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-203ENST00000552875 CNKSR2Q8WXI2 1034 aa11.54□□□□□ -0.56
PRKCH-203ENST00000552875 PAWRQ96IZ0 340 aaKnown RBP11.54□□□□□ -0.56
PRKCH-203ENST00000552875 HCN4Q9Y3Q4 1203 aa11.54□□□□□ -0.56
PRKCH-203ENST00000552875 CETPP11597 493 aa11.53□□□□□ -0.56
PRKCH-203ENST00000552875 HSP90B1P14625 803 aaKnown RBP11.53□□□□□ -0.56
PRKCH-203ENST00000552875 OSBPP22059 807 aa11.53□□□□□ -0.56
PRKCH-203ENST00000552875 EIF4G2P78344 907 aaKnown RBP eCLIP11.53□□□□□ -0.56
PRKCH-203ENST00000552875 DACT2Q5SW24 774 aa11.53□□□□□ -0.56
PRKCH-203ENST00000552875 ANKLE1Q8NAG6 615 aa11.53□□□□□ -0.56
PRKCH-203ENST00000552875 DEFB118Q96PH6 123 aa11.53□□□□□ -0.56
PRKCH-203ENST00000552875 CDX2Q99626 313 aaPredicted RBP11.53□□□□□ -0.56
PRKCH-203ENST00000552875 UNC93B1Q9H1C4 597 aa11.53□□□□□ -0.56
PRKCH-203ENST00000552875 USP2O75604 605 aaPredicted RBP11.52□□□□□ -0.57
PRKCH-203ENST00000552875 SYN1P17600 705 aa11.52□□□□□ -0.57
PRKCH-203ENST00000552875 ATP2B4P23634 1241 aa11.52□□□□□ -0.57
PRKCH-203ENST00000552875 PRKAR2BP31323 418 aa11.52□□□□□ -0.57
PRKCH-203ENST00000552875 DLGAP5Q15398 846 aa11.52□□□□□ -0.57
PRKCH-203ENST00000552875 C1QTNF1Q9BXJ1 281 aa11.52□□□□□ -0.57
PRKCH-203ENST00000552875 CSADQ9Y600 493 aa11.52□□□□□ -0.57
PRKCH-203ENST00000552875 TAF1P21675 1872 aa11.52□□□□□ -0.57
PRKCH-203ENST00000552875 XDHP47989 1333 aa11.52□□□□□ -0.57
PRKCH-203ENST00000552875 MUC3AQ02505 3323 aa11.52□□□□□ -0.57
PRKCH-203ENST00000552875 LAMB1P07942 1786 aa11.51□□□□□ -0.57
PRKCH-203ENST00000552875 SCN9AQ15858 1988 aa11.51□□□□□ -0.57
PRKCH-203ENST00000552875 FCGRTP55899 365 aa11.51□□□□□ -0.57
PRKCH-203ENST00000552875 PHACTR3Q96KR7 559 aa11.51□□□□□ -0.57
PRKCH-203ENST00000552875 NBPF3Q9H094 633 aa11.51□□□□□ -0.57
PRKCH-203ENST00000552875 ZNF804BA4D1E1 1349 aa11.51□□□□□ -0.57
PRKCH-203ENST00000552875 TTC28Q96AY4 2481 aa11.51□□□□□ -0.57
PRKCH-203ENST00000552875 LAMB4A4D0S4 1761 aa11.51□□□□□ -0.57
PRKCH-203ENST00000552875 FOSL2P15408 326 aa11.5□□□□□ -0.57
PRKCH-203ENST00000552875 KIAA0825Q8IV33 1275 aa11.5□□□□□ -0.57
PRKCH-203ENST00000552875 MIS18AQ9NYP9 233 aa11.5□□□□□ -0.57
PRKCH-203ENST00000552875 ADGRA2Q96PE1 1338 aa11.5□□□□□ -0.57
PRKCH-203ENST00000552875 EIF4A1P60842 406 aaKnown RBP11.49□□□□□ -0.57
PRKCH-203ENST00000552875 SNAPC2Q13487 334 aa11.49□□□□□ -0.57
PRKCH-203ENST00000552875 TNFAIP1Q13829 316 aa11.49□□□□□ -0.57
PRKCH-203ENST00000552875 NBPF12Q5TAG4 269 aaPredicted RBP11.49□□□□□ -0.57
PRKCH-203ENST00000552875 C17orf99Q6UX52 265 aa11.49□□□□□ -0.57
PRKCH-203ENST00000552875 COA1Q9GZY4 146 aa11.49□□□□□ -0.57
PRKCH-203ENST00000552875 CRISPLD2Q9H0B8 497 aa11.49□□□□□ -0.57
PRKCH-203ENST00000552875 SSC5DA1L4H1 1573 aa11.49□□□□□ -0.57
PRKCH-203ENST00000552875 BTBD19C9JJ37 291 aa11.48□□□□□ -0.57
PRKCH-203ENST00000552875 ADCY3O60266 1144 aa11.48□□□□□ -0.57
PRKCH-203ENST00000552875 INHAP05111 366 aa11.48□□□□□ -0.57
PRKCH-203ENST00000552875 PRKCZQ05513 592 aa11.48□□□□□ -0.57
PRKCH-203ENST00000552875 DCTN1Q14203 1278 aa11.48□□□□□ -0.57
PRKCH-203ENST00000552875 TTLL5Q6EMB2 1281 aa11.48□□□□□ -0.57
PRKCH-203ENST00000552875 MTMR14Q8NCE2 650 aa11.48□□□□□ -0.57
PRKCH-203ENST00000552875 PXYLP1Q8TE99 480 aa11.48□□□□□ -0.57
PRKCH-203ENST00000552875 FAM89AQ96GI7 184 aa11.48□□□□□ -0.57
PRKCH-203ENST00000552875 ZBED3Q96IU2 234 aaPredicted RBP11.48□□□□□ -0.57
PRKCH-203ENST00000552875 MXD3Q9BW11 206 aa11.48□□□□□ -0.57
PRKCH-203ENST00000552875 VEZTQ9HBM0 779 aa11.48□□□□□ -0.57
PRKCH-203ENST00000552875 PAK6Q9NQU5 681 aaPredicted RBP11.48□□□□□ -0.57
PRKCH-203ENST00000552875 CPA4Q9UI42 421 aa11.48□□□□□ -0.57
PRKCH-203ENST00000552875 MED23Q9ULK4 1368 aa11.48□□□□□ -0.57
PRKCH-203ENST00000552875 LAMB2P55268 1798 aa11.48□□□□□ -0.57
PRKCH-203ENST00000552875 MAP3K9P80192 1104 aa11.47□□□□□ -0.57
PRKCH-203ENST00000552875 IL27Q8NEV9 243 aa11.47□□□□□ -0.57
PRKCH-203ENST00000552875 LBHD1Q9BQE6 289 aaPredicted RBP11.47□□□□□ -0.57
PRKCH-203ENST00000552875 THUMPD2Q9BTF0 503 aaKnown RBP11.47□□□□□ -0.57
PRKCH-203ENST00000552875 SEMA6BQ9H3T3 888 aa11.47□□□□□ -0.57
PRKCH-203ENST00000552875 C11orf49Q9H6J7 331 aa11.47□□□□□ -0.57
PRKCH-203ENST00000552875 EYSQ5T1H1 3165 aa11.47□□□□□ -0.57
PRKCH-203ENST00000552875 CLSPNQ9HAW4 1339 aa11.46□□□□□ -0.57
PRKCH-203ENST00000552875 AIMP1Q12904 312 aaKnown RBP11.46□□□□□ -0.57
PRKCH-203ENST00000552875 VGLL4Q14135 290 aa11.46□□□□□ -0.57
PRKCH-203ENST00000552875 RASA3Q14644 834 aa11.46□□□□□ -0.57
PRKCH-203ENST00000552875 CCDC152Q4G0S7 254 aa11.46□□□□□ -0.57
PRKCH-203ENST00000552875 COPS6Q7L5N1 327 aa11.46□□□□□ -0.57
PRKCH-203ENST00000552875 DIS3LQ8TF46 1054 aaKnown RBP11.46□□□□□ -0.57
PRKCH-203ENST00000552875 MYLIPQ8WY64 445 aa11.46□□□□□ -0.57
PRKCH-203ENST00000552875 RSPH6AQ9H0K4 717 aa11.46□□□□□ -0.57
PRKCH-203ENST00000552875 CLRN2A0PK11 232 aa11.45□□□□□ -0.58
PRKCH-203ENST00000552875 SPDYE5A6NIY4 337 aa11.45□□□□□ -0.58
PRKCH-203ENST00000552875 IRS4O14654 1257 aaPredicted RBP11.45□□□□□ -0.58
PRKCH-203ENST00000552875 EIF2S2P20042 333 aaKnown RBP11.45□□□□□ -0.58
PRKCH-203ENST00000552875 CTGFP29279 349 aa11.45□□□□□ -0.58
PRKCH-203ENST00000552875 AMER1Q5JTC6 1135 aaPredicted RBP11.45□□□□□ -0.58
PRKCH-203ENST00000552875 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.45□□□□□ -0.58
PRKCH-203ENST00000552875 ERO1BQ86YB8 467 aa11.45□□□□□ -0.58
PRKCH-203ENST00000552875 ANKRD18AQ8IVF6 992 aa11.45□□□□□ -0.58
PRKCH-203ENST00000552875 ATXN2LQ8WWM7 1075 aaKnown RBP11.45□□□□□ -0.58
PRKCH-203ENST00000552875 NUDCQ9Y266 331 aa11.45□□□□□ -0.58
PRKCH-203ENST00000552875 NEFMP07197 916 aa11.44□□□□□ -0.58
PRKCH-203ENST00000552875 MDM2Q00987 491 aaPredicted RBP11.44□□□□□ -0.58
PRKCH-203ENST00000552875 LRP10Q7Z4F1 713 aa11.44□□□□□ -0.58
PRKCH-203ENST00000552875 CFAP53Q96M91 514 aa11.44□□□□□ -0.58
PRKCH-203ENST00000552875 PSME4Q14997 1843 aa11.44□□□□□ -0.58
PRKCH-203ENST00000552875 SPDYE2BA6NHP3 402 aa11.43□□□□□ -0.58
PRKCH-203ENST00000552875 SPDYE6P0CI01 402 aa11.43□□□□□ -0.58
PRKCH-203ENST00000552875 ELNP15502 786 aa11.43□□□□□ -0.58
PRKCH-203ENST00000552875 IRF5Q13568 498 aa11.43□□□□□ -0.58
PRKCH-203ENST00000552875 PDIA6Q15084 440 aa11.43□□□□□ -0.58
PRKCH-203ENST00000552875 RTL5Q5HYW3 569 aaPredicted RBP11.43□□□□□ -0.58
PRKCH-203ENST00000552875 ANKRD23Q86SG2 305 aa11.43□□□□□ -0.58
PRKCH-203ENST00000552875 XAGE3Q8WTP9 111 aa11.43□□□□□ -0.58
PRKCH-203ENST00000552875 UHRF1Q96T88 793 aaPredicted RBP11.43□□□□□ -0.58
PRKCH-203ENST00000552875 PARK7Q99497 189 aaKnown RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms