RNA–Protein interactions for RNA: ENST00000552812.1

CACNB3-224, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

Gene CACNB3, Length 1,712 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-224ENST00000552812 FKBP4Q02790 459 aaKnown RBP eCLIP13.6□□□□□ -0.23
CACNB3-224ENST00000552812 NMIQ13287 307 aaPredicted RBP13.6□□□□□ -0.23
CACNB3-224ENST00000552812 TTF1Q15361 905 aaPredicted RBP13.6□□□□□ -0.23
CACNB3-224ENST00000552812 MARVELD3Q96A59 401 aa13.6□□□□□ -0.23
CACNB3-224ENST00000552812 BRIP1Q9BX63 1249 aa13.6□□□□□ -0.23
CACNB3-224ENST00000552812 PARP3Q9Y6F1 533 aa13.6□□□□□ -0.23
CACNB3-224ENST00000552812 MED23Q9ULK4 1368 aa13.6□□□□□ -0.23
CACNB3-224ENST00000552812 MMP10P09238 476 aa13.59□□□□□ -0.23
CACNB3-224ENST00000552812 SCARF1Q14162 830 aa13.59□□□□□ -0.23
CACNB3-224ENST00000552812 IL17RAQ96F46 866 aa13.59□□□□□ -0.23
CACNB3-224ENST00000552812 RBM17Q96I25 401 aaKnown RBP13.59□□□□□ -0.23
CACNB3-224ENST00000552812 FAM227BQ96M60 508 aa13.59□□□□□ -0.23
CACNB3-224ENST00000552812 LSG1Q9H089 658 aaKnown RBP13.59□□□□□ -0.23
CACNB3-224ENST00000552812 DAXXQ9UER7 740 aaPredicted RBP13.59□□□□□ -0.23
CACNB3-224ENST00000552812 ANKRD31Q8N7Z5 1873 aa13.59□□□□□ -0.23
CACNB3-224ENST00000552812 A0A0D9SFI3 127 aa13.59□□□□□ -0.23
CACNB3-224ENST00000552812 ZFYP08048 801 aaPredicted RBP13.59□□□□□ -0.23
CACNB3-224ENST00000552812 ZAP70P43403 619 aa13.59□□□□□ -0.23
CACNB3-224ENST00000552812 RABEP1Q15276 862 aa13.59□□□□□ -0.23
CACNB3-224ENST00000552812 DCAF8Q5TAQ9 597 aa13.59□□□□□ -0.23
CACNB3-224ENST00000552812 IL27Q8NEV9 243 aa13.59□□□□□ -0.23
CACNB3-224ENST00000552812 CRAMP1Q96RY5 1269 aa13.59□□□□□ -0.23
CACNB3-224ENST00000552812 ZNF804BA4D1E1 1349 aa13.58□□□□□ -0.23
CACNB3-224ENST00000552812 SNAP23O00161 211 aa13.58□□□□□ -0.24
CACNB3-224ENST00000552812 HSPA4P34932 840 aa13.58□□□□□ -0.24
CACNB3-224ENST00000552812 TMC4Q7Z404 712 aa13.58□□□□□ -0.24
CACNB3-224ENST00000552812 DEFB132Q7Z7B7 95 aa13.58□□□□□ -0.24
CACNB3-224ENST00000552812 SNX21Q969T3 373 aa13.58□□□□□ -0.24
CACNB3-224ENST00000552812 ANTXR1Q9H6X2 564 aa13.58□□□□□ -0.24
CACNB3-224ENST00000552812 HELLSQ9NRZ9 838 aa13.58□□□□□ -0.24
CACNB3-224ENST00000552812 CCDC171Q6TFL3 1326 aa13.58□□□□□ -0.24
CACNB3-224ENST00000552812 BBOX1O75936 387 aa13.57□□□□□ -0.24
CACNB3-224ENST00000552812 PDE6BP35913 854 aa13.57□□□□□ -0.24
CACNB3-224ENST00000552812 MCMDC2Q4G0Z9 681 aa13.57□□□□□ -0.24
CACNB3-224ENST00000552812 CAVIN4Q5BKX8 364 aa13.57□□□□□ -0.24
CACNB3-224ENST00000552812 SPATA5Q8NB90 893 aa13.57□□□□□ -0.24
CACNB3-224ENST00000552812 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.57□□□□□ -0.24
CACNB3-224ENST00000552812 GNL3LQ9NVN8 582 aaKnown RBP13.57□□□□□ -0.24
CACNB3-224ENST00000552812 MYH7P12883 1935 aa13.57□□□□□ -0.24
CACNB3-224ENST00000552812 RNF113AO15541 343 aaKnown RBP13.56□□□□□ -0.24
CACNB3-224ENST00000552812 KCNJ4P48050 445 aa13.56□□□□□ -0.24
CACNB3-224ENST00000552812 RASGRF1Q13972 1273 aa13.56□□□□□ -0.24
CACNB3-224ENST00000552812 ZMYM1Q5SVZ6 1142 aa13.56□□□□□ -0.24
CACNB3-224ENST00000552812 PI16Q6UXB8 463 aa13.56□□□□□ -0.24
CACNB3-224ENST00000552812 HMG20BQ9P0W2 317 aa13.56□□□□□ -0.24
CACNB3-224ENST00000552812 XDHP47989 1333 aa13.56□□□□□ -0.24
CACNB3-224ENST00000552812 CYP2E1P05181 493 aaPredicted RBP13.56□□□□□ -0.24
CACNB3-224ENST00000552812 BCAMP50895 628 aa13.56□□□□□ -0.24
CACNB3-224ENST00000552812 ZSCAN25Q6NSZ9 544 aa13.56□□□□□ -0.24
CACNB3-224ENST00000552812 MAP4K1Q92918 833 aa13.56□□□□□ -0.24
CACNB3-224ENST00000552812 TBC1D2Q9BYX2 928 aa13.56□□□□□ -0.24
CACNB3-224ENST00000552812 LEMD3Q9Y2U8 911 aa13.56□□□□□ -0.24
CACNB3-224ENST00000552812 DOCK2Q92608 1830 aa13.55□□□□□ -0.24
CACNB3-224ENST00000552812 LRRC37AA6NMS7 1700 aa13.55□□□□□ -0.24
CACNB3-224ENST00000552812 SEMA3EO15041 775 aa13.55□□□□□ -0.24
CACNB3-224ENST00000552812 SRGNP10124 158 aa13.55□□□□□ -0.24
CACNB3-224ENST00000552812 NPR1P16066 1061 aa13.55□□□□□ -0.24
CACNB3-224ENST00000552812 MSL1Q68DK7 614 aa13.55□□□□□ -0.24
CACNB3-224ENST00000552812 ZNF589Q86UQ0 364 aaPredicted RBP13.55□□□□□ -0.24
CACNB3-224ENST00000552812 PDS5AQ29RF7 1337 aaKnown RBP13.54□□□□□ -0.24
CACNB3-224ENST00000552812 PTH1RQ03431 593 aa13.54□□□□□ -0.24
CACNB3-224ENST00000552812 FBXO33Q7Z6M2 555 aa13.54□□□□□ -0.24
CACNB3-224ENST00000552812 ILDR1Q86SU0 546 aaPredicted RBP13.54□□□□□ -0.24
CACNB3-224ENST00000552812 VPS37DQ86XT2 251 aa13.54□□□□□ -0.24
CACNB3-224ENST00000552812 HSCBQ8IWL3 235 aa13.54□□□□□ -0.24
CACNB3-224ENST00000552812 SLC16A10Q8TF71 515 aa13.54□□□□□ -0.24
CACNB3-224ENST00000552812 FAM84BQ96KN1 310 aaPredicted RBP13.54□□□□□ -0.24
CACNB3-224ENST00000552812 ANKIB1Q9P2G1 1089 aa13.54□□□□□ -0.24
CACNB3-224ENST00000552812 PYGBP11216 843 aa13.53□□□□□ -0.24
CACNB3-224ENST00000552812 ALDH1B1P30837 517 aa13.53□□□□□ -0.24
CACNB3-224ENST00000552812 GYG1P46976 350 aa13.53□□□□□ -0.24
CACNB3-224ENST00000552812 NECTIN1Q15223 517 aa13.53□□□□□ -0.24
CACNB3-224ENST00000552812 UBE3CQ15386 1083 aa13.53□□□□□ -0.24
CACNB3-224ENST00000552812 C15orf52Q6ZUT6 534 aaKnown RBP13.53□□□□□ -0.24
CACNB3-224ENST00000552812 APPBP2Q92624 585 aa13.53□□□□□ -0.24
CACNB3-224ENST00000552812 KCNB2Q92953 911 aa13.53□□□□□ -0.24
CACNB3-224ENST00000552812 DENND2AQ9ULE3 1009 aa13.53□□□□□ -0.24
CACNB3-224ENST00000552812 PALD1Q9ULE6 856 aa13.53□□□□□ -0.24
CACNB3-224ENST00000552812 IRS2Q9Y4H2 1338 aa13.53□□□□□ -0.24
CACNB3-224ENST00000552812 ADD2P35612 726 aa13.53□□□□□ -0.24
CACNB3-224ENST00000552812 SEC62Q99442 399 aaKnown RBP13.53□□□□□ -0.24
CACNB3-224ENST00000552812 PIH1D3Q9NQM4 214 aaKnown RBP13.53□□□□□ -0.24
CACNB3-224ENST00000552812 PODXL2Q9NZ53 605 aa13.53□□□□□ -0.24
CACNB3-224ENST00000552812 RBM8AQ9Y5S9 174 aaKnown RBP13.53□□□□□ -0.24
CACNB3-224ENST00000552812 COL11A2P13942 1736 aaPredicted RBP13.52□□□□□ -0.24
CACNB3-224ENST00000552812 MAST3O60307 1309 aa13.52□□□□□ -0.25
CACNB3-224ENST00000552812 CHGBP05060 677 aa13.52□□□□□ -0.25
CACNB3-224ENST00000552812 ATP2B4P23634 1241 aa13.52□□□□□ -0.25
CACNB3-224ENST00000552812 HIBADHP31937 336 aaKnown RBP13.52□□□□□ -0.25
CACNB3-224ENST00000552812 MAP3K12Q12852 859 aa13.52□□□□□ -0.25
CACNB3-224ENST00000552812 RNF20Q5VTR2 975 aa13.52□□□□□ -0.25
CACNB3-224ENST00000552812 SP8Q8IXZ3 490 aa13.52□□□□□ -0.25
CACNB3-224ENST00000552812 MASTLQ96GX5 879 aa13.52□□□□□ -0.25
CACNB3-224ENST00000552812 DSCC1Q9BVC3 393 aa13.52□□□□□ -0.25
CACNB3-224ENST00000552812 WTIPA6NIX2 430 aaPredicted RBP13.51□□□□□ -0.25
CACNB3-224ENST00000552812 PPEF1O14829 653 aaPredicted RBP13.51□□□□□ -0.25
CACNB3-224ENST00000552812 IDH1O75874 414 aaKnown RBP13.51□□□□□ -0.25
CACNB3-224ENST00000552812 ZKSCAN1P17029 563 aaPredicted RBP13.51□□□□□ -0.25
CACNB3-224ENST00000552812 SLC9C2Q5TAH2 1124 aa13.51□□□□□ -0.25
CACNB3-224ENST00000552812 OSBP2Q969R2 916 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms