RNA–Protein interactions for RNA: ENST00000552742.5

PFDN5-218, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-218ENST00000552742 FMR1Q06787 632 aaKnown RBP eCLIP12.19□□□□□ -0.46
PFDN5-218ENST00000552742 CAVIN4Q5BKX8 364 aa12.19□□□□□ -0.46
PFDN5-218ENST00000552742 KIAA0825Q8IV33 1275 aa12.19□□□□□ -0.46
PFDN5-218ENST00000552742 ASTN2O75129 1339 aaPredicted RBP12.18□□□□□ -0.46
PFDN5-218ENST00000552742 FAM205AQ6ZU69 1335 aa12.18□□□□□ -0.46
PFDN5-218ENST00000552742 FRAT2O75474 233 aaPredicted RBP12.18□□□□□ -0.46
PFDN5-218ENST00000552742 SURF6O75683 361 aaKnown RBP12.18□□□□□ -0.46
PFDN5-218ENST00000552742 ADORA1P30542 326 aa12.18□□□□□ -0.46
PFDN5-218ENST00000552742 APLP1P51693 650 aa12.18□□□□□ -0.46
PFDN5-218ENST00000552742 SCARF1Q14162 830 aa12.18□□□□□ -0.46
PFDN5-218ENST00000552742 CEP85Q6P2H3 762 aa12.18□□□□□ -0.46
PFDN5-218ENST00000552742 ZC3H15Q8WU90 426 aaKnown RBP12.18□□□□□ -0.46
PFDN5-218ENST00000552742 MYOZ2Q9NPC6 264 aa12.18□□□□□ -0.46
PFDN5-218ENST00000552742 MYO3BQ8WXR4 1341 aa12.17□□□□□ -0.46
PFDN5-218ENST00000552742 PASKQ96RG2 1323 aa12.17□□□□□ -0.46
PFDN5-218ENST00000552742 F8W031 263 aaPredicted RBP12.17□□□□□ -0.46
PFDN5-218ENST00000552742 TRAF5O00463 557 aa12.17□□□□□ -0.46
PFDN5-218ENST00000552742 CHAF1AQ13111 956 aaPredicted RBP12.17□□□□□ -0.46
PFDN5-218ENST00000552742 OS9Q13438 667 aaPredicted RBP12.17□□□□□ -0.46
PFDN5-218ENST00000552742 KIF4BQ2VIQ3 1234 aa12.17□□□□□ -0.46
PFDN5-218ENST00000552742 DLK2Q6UY11 383 aa12.17□□□□□ -0.46
PFDN5-218ENST00000552742 USP48Q86UV5 1035 aa12.17□□□□□ -0.46
PFDN5-218ENST00000552742 OGFOD1Q8N543 542 aa12.17□□□□□ -0.46
PFDN5-218ENST00000552742 NEUROD6Q96NK8 337 aa12.17□□□□□ -0.46
PFDN5-218ENST00000552742 GLIS2Q9BZE0 524 aaPredicted RBP12.17□□□□□ -0.46
PFDN5-218ENST00000552742 ZNF609O15014 1411 aa12.17□□□□□ -0.46
PFDN5-218ENST00000552742 PHKA1P46020 1223 aa12.16□□□□□ -0.46
PFDN5-218ENST00000552742 RRP1P56182 461 aaKnown RBP12.16□□□□□ -0.46
PFDN5-218ENST00000552742 GRIK5Q16478 980 aa12.16□□□□□ -0.46
PFDN5-218ENST00000552742 NBPF9Q3BBW0 867 aa12.16□□□□□ -0.46
PFDN5-218ENST00000552742 MFSD14BQ5SR56 506 aa12.16□□□□□ -0.46
PFDN5-218ENST00000552742 SIRT2Q8IXJ6 389 aa12.16□□□□□ -0.46
PFDN5-218ENST00000552742 XAGE2Q96GT9 111 aa12.16□□□□□ -0.46
PFDN5-218ENST00000552742 CHMP4BQ9H444 224 aaKnown RBP12.16□□□□□ -0.46
PFDN5-218ENST00000552742 AKAP2Q9Y2D5 859 aa12.16□□□□□ -0.46
PFDN5-218ENST00000552742 NOP58Q9Y2X3 529 aaKnown RBP12.16□□□□□ -0.46
PFDN5-218ENST00000552742 MYH13Q9UKX3 1938 aa12.15□□□□□ -0.46
PFDN5-218ENST00000552742 TRPM7Q96QT4 1865 aa12.15□□□□□ -0.46
PFDN5-218ENST00000552742 A0A1B0GUL7 405 aa12.15□□□□□ -0.46
PFDN5-218ENST00000552742 FKBP1AP62942 108 aaKnown RBP12.15□□□□□ -0.46
PFDN5-218ENST00000552742 RPAP2Q8IXW5 612 aaPredicted RBP12.15□□□□□ -0.46
PFDN5-218ENST00000552742 DNAJC5GQ8N7S2 189 aa12.15□□□□□ -0.46
PFDN5-218ENST00000552742 DCPSQ96C86 337 aaKnown RBP12.15□□□□□ -0.46
PFDN5-218ENST00000552742 GNL3LQ9NVN8 582 aaKnown RBP12.15□□□□□ -0.46
PFDN5-218ENST00000552742 HDAC9Q9UKV0 1011 aa12.15□□□□□ -0.46
PFDN5-218ENST00000552742 PCDHAC2Q9Y5I4 1007 aa12.15□□□□□ -0.46
PFDN5-218ENST00000552742 MMP14P50281 582 aa12.14□□□□□ -0.47
PFDN5-218ENST00000552742 ANGEL2Q5VTE6 544 aaKnown RBP12.14□□□□□ -0.47
PFDN5-218ENST00000552742 CST9Q5W186 159 aa12.14□□□□□ -0.47
PFDN5-218ENST00000552742 CCDC102BQ68D86 513 aa12.14□□□□□ -0.47
PFDN5-218ENST00000552742 CDC37L1Q7L3B6 337 aa12.14□□□□□ -0.47
PFDN5-218ENST00000552742 KRT26Q7Z3Y9 468 aa12.14□□□□□ -0.47
PFDN5-218ENST00000552742 ZBED3Q96IU2 234 aaPredicted RBP12.14□□□□□ -0.47
PFDN5-218ENST00000552742 SCAF8Q9UPN6 1271 aaKnown RBP12.14□□□□□ -0.47
PFDN5-218ENST00000552742 EXOC6BQ9Y2D4 811 aa12.14□□□□□ -0.47
PFDN5-218ENST00000552742 ADM5C9JUS6 153 aa12.13□□□□□ -0.47
PFDN5-218ENST00000552742 WNT10BO00744 389 aa12.13□□□□□ -0.47
PFDN5-218ENST00000552742 DLGAP5Q15398 846 aa12.13□□□□□ -0.47
PFDN5-218ENST00000552742 CFAP100Q494V2 611 aa12.13□□□□□ -0.47
PFDN5-218ENST00000552742 GORABQ5T7V8 394 aa12.13□□□□□ -0.47
PFDN5-218ENST00000552742 GGA3Q9NZ52 723 aa12.13□□□□□ -0.47
PFDN5-218ENST00000552742 TTF2Q9UNY4 1162 aaKnown RBP12.13□□□□□ -0.47
PFDN5-218ENST00000552742 ARAP2Q8WZ64 1704 aa12.12□□□□□ -0.47
PFDN5-218ENST00000552742 TMEM88BA6NKF7 163 aa12.12□□□□□ -0.47
PFDN5-218ENST00000552742 HMMRO75330 724 aa12.12□□□□□ -0.47
PFDN5-218ENST00000552742 RBM5P52756 815 aaKnown RBP eCLIP12.12□□□□□ -0.47
PFDN5-218ENST00000552742 TNNI3KQ59H18 835 aa12.12□□□□□ -0.47
PFDN5-218ENST00000552742 MTMR14Q8NCE2 650 aa12.12□□□□□ -0.47
PFDN5-218ENST00000552742 WDR66Q8TBY9 1149 aa12.12□□□□□ -0.47
PFDN5-218ENST00000552742 TBC1D22AQ8WUA7 517 aa12.12□□□□□ -0.47
PFDN5-218ENST00000552742 PRMT6Q96LA8 375 aaPredicted RBP12.12□□□□□ -0.47
PFDN5-218ENST00000552742 GPR108Q9NPR9 543 aa12.12□□□□□ -0.47
PFDN5-218ENST00000552742 CREBZFQ9NS37 354 aa12.12□□□□□ -0.47
PFDN5-218ENST00000552742 FPGT-TNNI3KV9GXZ4 949 aa12.12□□□□□ -0.47
PFDN5-218ENST00000552742 AOX1Q06278 1338 aa12.11□□□□□ -0.47
PFDN5-218ENST00000552742 APBB1O00213 710 aa12.11□□□□□ -0.47
PFDN5-218ENST00000552742 CELF2O95319 508 aaKnown RBP12.11□□□□□ -0.47
PFDN5-218ENST00000552742 SULF1Q8IWU6 871 aa12.11□□□□□ -0.47
PFDN5-218ENST00000552742 EAF2Q96CJ1 260 aaPredicted RBP12.11□□□□□ -0.47
PFDN5-218ENST00000552742 CRBNQ96SW2 442 aa12.11□□□□□ -0.47
PFDN5-218ENST00000552742 CCDC8Q9H0W5 538 aaPredicted RBP12.11□□□□□ -0.47
PFDN5-218ENST00000552742 ZNF408Q9H9D4 720 aa12.11□□□□□ -0.47
PFDN5-218ENST00000552742 DENND2AQ9ULE3 1009 aa12.11□□□□□ -0.47
PFDN5-218ENST00000552742 COL1A1P02452 1464 aaPredicted RBP12.1□□□□□ -0.47
PFDN5-218ENST00000552742 SPDYE2BA6NHP3 402 aa12.1□□□□□ -0.47
PFDN5-218ENST00000552742 SEMA3EO15041 775 aa12.1□□□□□ -0.47
PFDN5-218ENST00000552742 SPDYE6P0CI01 402 aa12.1□□□□□ -0.47
PFDN5-218ENST00000552742 RASGRF1Q13972 1273 aa12.1□□□□□ -0.47
PFDN5-218ENST00000552742 PRAMEF18Q5VWM3 479 aa12.1□□□□□ -0.47
PFDN5-218ENST00000552742 DBNDD2Q9BQY9 259 aa12.1□□□□□ -0.47
PFDN5-218ENST00000552742 BCL11AQ9H165 835 aa12.1□□□□□ -0.47
PFDN5-218ENST00000552742 SERPINA10Q9UK55 444 aa12.1□□□□□ -0.47
PFDN5-218ENST00000552742 PCDHB15Q9Y5E8 787 aa12.1□□□□□ -0.47
PFDN5-218ENST00000552742 CLRN2A0PK11 232 aa12.09□□□□□ -0.47
PFDN5-218ENST00000552742 CRKP46108 304 aa12.09□□□□□ -0.47
PFDN5-218ENST00000552742 HSP90AB4PQ58FF6 505 aa12.09□□□□□ -0.47
PFDN5-218ENST00000552742 PI16Q6UXB8 463 aa12.09□□□□□ -0.47
PFDN5-218ENST00000552742 ERC1Q8IUD2 1116 aa12.09□□□□□ -0.47
PFDN5-218ENST00000552742 RHPN1Q8TCX5 695 aa12.09□□□□□ -0.47
PFDN5-218ENST00000552742 CDCA5Q96FF9 252 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms