RNA–Protein interactions for RNA: ENST00000551641.5

RAB3IP-215, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RAB3IP, Length 2,840 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-215ENST00000551641 LARP1BQ659C4 914 aaKnown RBP9.6□□□□□ -0.87
RAB3IP-215ENST00000551641 LY75O60449 1722 aa9.59□□□□□ -0.87
RAB3IP-215ENST00000551641 NUP98P52948 1817 aa9.59□□□□□ -0.87
RAB3IP-215ENST00000551641 ZNF609O15014 1411 aa9.59□□□□□ -0.87
RAB3IP-215ENST00000551641 TFCP2Q12800 502 aa9.59□□□□□ -0.87
RAB3IP-215ENST00000551641 PARP10Q53GL7 1025 aa9.59□□□□□ -0.87
RAB3IP-215ENST00000551641 CLEC4GQ6UXB4 293 aa9.59□□□□□ -0.87
RAB3IP-215ENST00000551641 NEUROD6Q96NK8 337 aa9.59□□□□□ -0.87
RAB3IP-215ENST00000551641 HAUS7Q99871 368 aa9.59□□□□□ -0.87
RAB3IP-215ENST00000551641 TAF1LQ8IZX4 1826 aa9.59□□□□□ -0.87
RAB3IP-215ENST00000551641 ABCC12Q96J65 1359 aa9.59□□□□□ -0.87
RAB3IP-215ENST00000551641 COL5A3P25940 1745 aaPredicted RBP9.59□□□□□ -0.87
RAB3IP-215ENST00000551641 VPS37CA5D8V6 355 aaPredicted RBP9.59□□□□□ -0.87
RAB3IP-215ENST00000551641 CTSWP56202 376 aa9.59□□□□□ -0.87
RAB3IP-215ENST00000551641 KRT85P78386 507 aa9.59□□□□□ -0.87
RAB3IP-215ENST00000551641 CDC37L1Q7L3B6 337 aa9.59□□□□□ -0.87
RAB3IP-215ENST00000551641 TTLL11Q8NHH1 800 aa9.59□□□□□ -0.87
RAB3IP-215ENST00000551641 CNNM1Q9NRU3 951 aa9.59□□□□□ -0.87
RAB3IP-215ENST00000551641 PARP3Q9Y6F1 533 aa9.59□□□□□ -0.87
RAB3IP-215ENST00000551641 PDE8AO60658 829 aa9.58□□□□□ -0.88
RAB3IP-215ENST00000551641 PRR5LQ6MZQ0 368 aa9.58□□□□□ -0.88
RAB3IP-215ENST00000551641 TTC6Q86TZ1 520 aa9.58□□□□□ -0.88
RAB3IP-215ENST00000551641 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.58□□□□□ -0.88
RAB3IP-215ENST00000551641 TNS1Q9HBL0 1735 aaKnown RBP9.58□□□□□ -0.88
RAB3IP-215ENST00000551641 KDM4AO75164 1064 aa9.58□□□□□ -0.88
RAB3IP-215ENST00000551641 LDHAL6AQ6ZMR3 332 aa9.58□□□□□ -0.88
RAB3IP-215ENST00000551641 EDC3Q96F86 508 aaKnown RBP9.58□□□□□ -0.88
RAB3IP-215ENST00000551641 NLRP3Q96P20 1036 aa9.58□□□□□ -0.88
RAB3IP-215ENST00000551641 GPR108Q9NPR9 543 aa9.58□□□□□ -0.88
RAB3IP-215ENST00000551641 USP25Q9UHP3 1055 aa9.58□□□□□ -0.88
RAB3IP-215ENST00000551641 U3KPZ7 1027 aaPredicted RBP9.58□□□□□ -0.88
RAB3IP-215ENST00000551641 TRIM28Q13263 835 aaKnown RBP9.57□□□□□ -0.88
RAB3IP-215ENST00000551641 NLGN1Q8N2Q7 840 aa9.57□□□□□ -0.88
RAB3IP-215ENST00000551641 GTF3C6Q969F1 213 aa9.57□□□□□ -0.88
RAB3IP-215ENST00000551641 ZNF622Q969S3 477 aaKnown RBP eCLIP9.57□□□□□ -0.88
RAB3IP-215ENST00000551641 ANKRD18BA2A2Z9 1011 aa9.57□□□□□ -0.88
RAB3IP-215ENST00000551641 ADCY5O95622 1261 aa9.57□□□□□ -0.88
RAB3IP-215ENST00000551641 ST5P78524 1137 aa9.57□□□□□ -0.88
RAB3IP-215ENST00000551641 MCMDC2Q4G0Z9 681 aa9.57□□□□□ -0.88
RAB3IP-215ENST00000551641 GIMAP6Q6P9H5 292 aa9.57□□□□□ -0.88
RAB3IP-215ENST00000551641 NEK1Q96PY6 1258 aa9.57□□□□□ -0.88
RAB3IP-215ENST00000551641 MPHOSPH8Q99549 860 aa9.57□□□□□ -0.88
RAB3IP-215ENST00000551641 DBNDD2Q9BQY9 259 aa9.57□□□□□ -0.88
RAB3IP-215ENST00000551641 SCAND2PQ9GZW5 306 aaPredicted RBP9.57□□□□□ -0.88
RAB3IP-215ENST00000551641 NUP188Q5SRE5 1749 aa9.57□□□□□ -0.88
RAB3IP-215ENST00000551641 CARMIL3Q8ND23 1372 aa9.57□□□□□ -0.88
RAB3IP-215ENST00000551641 WTIPA6NIX2 430 aaPredicted RBP9.56□□□□□ -0.88
RAB3IP-215ENST00000551641 PTMAP06454 111 aaKnown RBP9.56□□□□□ -0.88
RAB3IP-215ENST00000551641 KIAA2012Q0VF49 1180 aa9.56□□□□□ -0.88
RAB3IP-215ENST00000551641 KBTBD3Q8NAB2 608 aa9.56□□□□□ -0.88
RAB3IP-215ENST00000551641 NYXQ9GZU5 481 aa9.56□□□□□ -0.88
RAB3IP-215ENST00000551641 NDUFB9Q9Y6M9 179 aa9.56□□□□□ -0.88
RAB3IP-215ENST00000551641 POLRMTO00411 1230 aaKnown RBP9.56□□□□□ -0.88
RAB3IP-215ENST00000551641 DTNBO60941 627 aa9.56□□□□□ -0.88
RAB3IP-215ENST00000551641 TIMM10P62072 90 aa9.56□□□□□ -0.88
RAB3IP-215ENST00000551641 CCDC152Q4G0S7 254 aa9.56□□□□□ -0.88
RAB3IP-215ENST00000551641 METTL24Q5JXM2 366 aa9.56□□□□□ -0.88
RAB3IP-215ENST00000551641 RBM43Q6ZSC3 357 aaKnown RBP9.56□□□□□ -0.88
RAB3IP-215ENST00000551641 CELF1Q92879 486 aaKnown RBP9.56□□□□□ -0.88
RAB3IP-215ENST00000551641 TCEANC2Q96MN5 208 aa9.56□□□□□ -0.88
RAB3IP-215ENST00000551641 CYP21A2P08686 494 aa9.55□□□□□ -0.88
RAB3IP-215ENST00000551641 CHRNA5P30532 468 aa9.55□□□□□ -0.88
RAB3IP-215ENST00000551641 HSP90AA2PQ14568 343 aaPredicted RBP9.55□□□□□ -0.88
RAB3IP-215ENST00000551641 OLFM4Q6UX06 510 aa9.55□□□□□ -0.88
RAB3IP-215ENST00000551641 ATG9AQ7Z3C6 839 aa9.55□□□□□ -0.88
RAB3IP-215ENST00000551641 FLAD1Q8NFF5 587 aa9.55□□□□□ -0.88
RAB3IP-215ENST00000551641 UBE2Q2Q8WVN8 375 aa9.55□□□□□ -0.88
RAB3IP-215ENST00000551641 PIBF1Q8WXW3 757 aa9.55□□□□□ -0.88
RAB3IP-215ENST00000551641 RPGRQ92834 1020 aaKnown RBP9.55□□□□□ -0.88
RAB3IP-215ENST00000551641 R3HCC1Q9Y3T6 440 aaKnown RBP9.55□□□□□ -0.88
RAB3IP-215ENST00000551641 CCDC192P0DO97 292 aa9.55□□□□□ -0.88
RAB3IP-215ENST00000551641 CCDC125Q86Z20 511 aa9.55□□□□□ -0.88
RAB3IP-215ENST00000551641 SMARCC2Q8TAQ2 1214 aa9.55□□□□□ -0.88
RAB3IP-215ENST00000551641 AGXT2Q9BYV1 514 aa9.55□□□□□ -0.88
RAB3IP-215ENST00000551641 TM4SF1P30408 202 aa9.55□□□□□ -0.88
RAB3IP-215ENST00000551641 DDX46Q7L014 1031 aaKnown RBP9.55□□□□□ -0.88
RAB3IP-215ENST00000551641 LEO1Q8WVC0 666 aaPredicted RBP9.55□□□□□ -0.88
RAB3IP-215ENST00000551641 GPR101Q96P66 508 aaPredicted RBP9.55□□□□□ -0.88
RAB3IP-215ENST00000551641 DSCC1Q9BVC3 393 aa9.55□□□□□ -0.88
RAB3IP-215ENST00000551641 HELLSQ9NRZ9 838 aa9.55□□□□□ -0.88
RAB3IP-215ENST00000551641 IQSEC3Q9UPP2 1182 aaPredicted RBP9.55□□□□□ -0.88
RAB3IP-215ENST00000551641 UBR3Q6ZT12 1888 aa9.54□□□□□ -0.88
RAB3IP-215ENST00000551641 SPEF2Q9C093 1822 aa9.54□□□□□ -0.88
RAB3IP-215ENST00000551641 AP5Z1O43299 807 aa9.54□□□□□ -0.88
RAB3IP-215ENST00000551641 HMGB1P09429 215 aaKnown RBP9.54□□□□□ -0.88
RAB3IP-215ENST00000551641 LIG1P18858 919 aa9.54□□□□□ -0.88
RAB3IP-215ENST00000551641 IGHMBP2P38935 993 aaKnown RBP9.54□□□□□ -0.88
RAB3IP-215ENST00000551641 RESTQ13127 1097 aa9.54□□□□□ -0.88
RAB3IP-215ENST00000551641 FERMT3Q86UX7 667 aa9.54□□□□□ -0.88
RAB3IP-215ENST00000551641 SEC62Q99442 399 aaKnown RBP9.54□□□□□ -0.88
RAB3IP-215ENST00000551641 DNAJC2Q99543 621 aaKnown RBP9.54□□□□□ -0.88
RAB3IP-215ENST00000551641 LLPHQ9BRT6 129 aaKnown RBP9.54□□□□□ -0.88
RAB3IP-215ENST00000551641 NUP62CLQ9H1M0 184 aa9.54□□□□□ -0.88
RAB3IP-215ENST00000551641 DDX19AQ9NUU7 478 aaKnown RBP9.54□□□□□ -0.88
RAB3IP-215ENST00000551641 CHGBP05060 677 aa9.54□□□□□ -0.88
RAB3IP-215ENST00000551641 IL15P40933 162 aaPredicted RBP9.54□□□□□ -0.88
RAB3IP-215ENST00000551641 MAP3K11Q16584 847 aa9.54□□□□□ -0.88
RAB3IP-215ENST00000551641 GORABQ5T7V8 394 aa9.54□□□□□ -0.88
RAB3IP-215ENST00000551641 FAM173BQ6P4H8 233 aa9.54□□□□□ -0.88
RAB3IP-215ENST00000551641 SASS6Q6UVJ0 657 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms