RNA–Protein interactions for RNA: ENST00000551261.5

LETMD1-229, Transcript of LETM1 domain containing 1, humanhuman

TSL 5

Gene LETMD1, Length 521 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-229ENST00000551261 DSCC1Q9BVC3 393 aa17.07■□□□□ 0.32
LETMD1-229ENST00000551261 ANTXR1Q9H6X2 564 aa17.07■□□□□ 0.32
LETMD1-229ENST00000551261 U3KPZ7 1027 aaPredicted RBP17.07■□□□□ 0.32
LETMD1-229ENST00000551261 FRAT2O75474 233 aaPredicted RBP17.06■□□□□ 0.32
LETMD1-229ENST00000551261 TGFB2P61812 414 aa17.06■□□□□ 0.32
LETMD1-229ENST00000551261 SOGA3Q5TF21 947 aa17.06■□□□□ 0.32
LETMD1-229ENST00000551261 TBC1D16Q8TBP0 767 aa17.06■□□□□ 0.32
LETMD1-229ENST00000551261 WDR66Q8TBY9 1149 aa17.06■□□□□ 0.32
LETMD1-229ENST00000551261 NDUFB9Q9Y6M9 179 aa17.06■□□□□ 0.32
LETMD1-229ENST00000551261 KIAA1551Q9HCM1 1747 aa17.06■□□□□ 0.32
LETMD1-229ENST00000551261 RPAP1Q9BWH6 1393 aaPredicted RBP17.05■□□□□ 0.32
LETMD1-229ENST00000551261 MAST3O60307 1309 aa17.05■□□□□ 0.32
LETMD1-229ENST00000551261 SNAP23O00161 211 aa17.05■□□□□ 0.32
LETMD1-229ENST00000551261 ST18O60284 1047 aa17.05■□□□□ 0.32
LETMD1-229ENST00000551261 IDH1O75874 414 aaKnown RBP17.05■□□□□ 0.32
LETMD1-229ENST00000551261 KRT32Q14532 448 aa17.05■□□□□ 0.32
LETMD1-229ENST00000551261 SLC9C2Q5TAH2 1124 aa17.05■□□□□ 0.32
LETMD1-229ENST00000551261 PRPF40BQ6NWY9 871 aaKnown RBP17.05■□□□□ 0.32
LETMD1-229ENST00000551261 DPP8Q6V1X1 898 aaPredicted RBP17.05■□□□□ 0.32
LETMD1-229ENST00000551261 CERS3Q8IU89 383 aa17.05■□□□□ 0.32
LETMD1-229ENST00000551261 MPNDQ8N594 471 aa17.05■□□□□ 0.32
LETMD1-229ENST00000551261 SUPT20HQ8NEM7 779 aa17.05■□□□□ 0.32
LETMD1-229ENST00000551261 KCNB2Q92953 911 aa17.05■□□□□ 0.32
LETMD1-229ENST00000551261 ZNF622Q969S3 477 aaKnown RBP eCLIP17.05■□□□□ 0.32
LETMD1-229ENST00000551261 IL25Q9H293 177 aa17.05■□□□□ 0.32
LETMD1-229ENST00000551261 COL1A1P02452 1464 aaPredicted RBP17.05■□□□□ 0.32
LETMD1-229ENST00000551261 ZMYM6O95789 1325 aa17.04■□□□□ 0.32
LETMD1-229ENST00000551261 IL1R1P14778 569 aa17.04■□□□□ 0.32
LETMD1-229ENST00000551261 PDE6AP16499 860 aa17.04■□□□□ 0.32
LETMD1-229ENST00000551261 GNAT2P19087 354 aa17.04■□□□□ 0.32
LETMD1-229ENST00000551261 MCM2P49736 904 aa17.04■□□□□ 0.32
LETMD1-229ENST00000551261 PI16Q6UXB8 463 aa17.04■□□□□ 0.32
LETMD1-229ENST00000551261 HSCBQ8IWL3 235 aa17.04■□□□□ 0.32
LETMD1-229ENST00000551261 TDRD7Q8NHU6 1098 aaKnown RBP17.04■□□□□ 0.32
LETMD1-229ENST00000551261 TBC1D22AQ8WUA7 517 aa17.04■□□□□ 0.32
LETMD1-229ENST00000551261 KIF2CQ99661 725 aa17.04■□□□□ 0.32
LETMD1-229ENST00000551261 COA1Q9GZY4 146 aa17.04■□□□□ 0.32
LETMD1-229ENST00000551261 PIH1D3Q9NQM4 214 aaKnown RBP17.04■□□□□ 0.32
LETMD1-229ENST00000551261 LRP2BPQ9P2M1 347 aa17.04■□□□□ 0.32
LETMD1-229ENST00000551261 CTNNA3Q9UI47 895 aa17.04■□□□□ 0.32
LETMD1-229ENST00000551261 TM6SF1Q9BZW5 370 aa17.03■□□□□ 0.32
LETMD1-229ENST00000551261 NECTIN1Q15223 517 aa17.02■□□□□ 0.32
LETMD1-229ENST00000551261 TSGA10IPQ3SY00 556 aa17.02■□□□□ 0.32
LETMD1-229ENST00000551261 ZNF589Q86UQ0 364 aaPredicted RBP17.02■□□□□ 0.32
LETMD1-229ENST00000551261 RTFDC1Q9BY42 306 aaPredicted RBP17.02■□□□□ 0.32
LETMD1-229ENST00000551261 VPS33BQ9H267 617 aa17.02■□□□□ 0.32
LETMD1-229ENST00000551261 SUGT1Q9Y2Z0 365 aa17.02■□□□□ 0.32
LETMD1-229ENST00000551261 RBM8AQ9Y5S9 174 aaKnown RBP17.02■□□□□ 0.32
LETMD1-229ENST00000551261 CACNA1SQ13698 1873 aa17.01■□□□□ 0.31
LETMD1-229ENST00000551261 ZNF532Q9HCE3 1301 aa17.01■□□□□ 0.31
LETMD1-229ENST00000551261 TCRBV5S4A2TA0A5A2 114 aa17.01■□□□□ 0.31
LETMD1-229ENST00000551261 C6orf229H3BNL8 230 aa17.01■□□□□ 0.31
LETMD1-229ENST00000551261 KLRK1P26718 216 aa17.01■□□□□ 0.31
LETMD1-229ENST00000551261 PSMA5P28066 241 aa17.01■□□□□ 0.31
LETMD1-229ENST00000551261 GSTO1P78417 241 aa17.01■□□□□ 0.31
LETMD1-229ENST00000551261 ERICH6Q7L0X2 663 aa17.01■□□□□ 0.31
LETMD1-229ENST00000551261 TTLL6Q8N841 843 aa17.01■□□□□ 0.31
LETMD1-229ENST00000551261 OSBP2Q969R2 916 aa17.01■□□□□ 0.31
LETMD1-229ENST00000551261 AIDAQ96BJ3 306 aa17.01■□□□□ 0.31
LETMD1-229ENST00000551261 ZC3H12CQ9C0D7 883 aaKnown RBP17.01■□□□□ 0.31
LETMD1-229ENST00000551261 SNED1Q8TER0 1413 aa17.01■□□□□ 0.31
LETMD1-229ENST00000551261 CCDC88AQ3V6T2 1871 aa17.01■□□□□ 0.31
LETMD1-229ENST00000551261 FAM205AQ6ZU69 1335 aa17■□□□□ 0.31
LETMD1-229ENST00000551261 GPAA1O43292 621 aa17■□□□□ 0.31
LETMD1-229ENST00000551261 RTKN2Q8IZC4 609 aa17■□□□□ 0.31
LETMD1-229ENST00000551261 PDGFDQ9GZP0 370 aaPredicted RBP17■□□□□ 0.31
LETMD1-229ENST00000551261 CD209Q9NNX6 404 aa17■□□□□ 0.31
LETMD1-229ENST00000551261 POLLQ9UGP5 575 aa17■□□□□ 0.31
LETMD1-229ENST00000551261 CD2APQ9Y5K6 639 aa17■□□□□ 0.31
LETMD1-229ENST00000551261 SLX4Q8IY92 1834 aa16.99■□□□□ 0.31
LETMD1-229ENST00000551261 HSPD1P10809 573 aaKnown RBP16.99■□□□□ 0.31
LETMD1-229ENST00000551261 PTH1RQ03431 593 aa16.99■□□□□ 0.31
LETMD1-229ENST00000551261 R3HDM1Q15032 1099 aaKnown RBP16.99■□□□□ 0.31
LETMD1-229ENST00000551261 CCDC93Q567U6 631 aa16.99■□□□□ 0.31
LETMD1-229ENST00000551261 CREB3L3Q68CJ9 461 aa16.99■□□□□ 0.31
LETMD1-229ENST00000551261 SLF2Q8IX21 1173 aa16.99■□□□□ 0.31
LETMD1-229ENST00000551261 MAGEB6Q8N7X4 407 aa16.99■□□□□ 0.31
LETMD1-229ENST00000551261 C7orf43Q8WVR3 580 aa16.99■□□□□ 0.31
LETMD1-229ENST00000551261 RAI14Q9P0K7 980 aa16.99■□□□□ 0.31
LETMD1-229ENST00000551261 ABCF2Q9UG63 623 aa16.99■□□□□ 0.31
LETMD1-229ENST00000551261 M0R2C6 588 aa16.98■□□□□ 0.31
LETMD1-229ENST00000551261 ZBTB7AO95365 584 aa16.98■□□□□ 0.31
LETMD1-229ENST00000551261 HMGB1P09429 215 aaKnown RBP16.98■□□□□ 0.31
LETMD1-229ENST00000551261 NAA16Q6N069 864 aaPredicted RBP16.98■□□□□ 0.31
LETMD1-229ENST00000551261 PODNQ7Z5L7 613 aa16.98■□□□□ 0.31
LETMD1-229ENST00000551261 TXNRD3Q86VQ6 643 aa16.98■□□□□ 0.31
LETMD1-229ENST00000551261 PSMD1Q99460 953 aa16.98■□□□□ 0.31
LETMD1-229ENST00000551261 NACAP1Q9BZK3 213 aa16.98■□□□□ 0.31
LETMD1-229ENST00000551261 WWC3Q9ULE0 1092 aa16.98■□□□□ 0.31
LETMD1-229ENST00000551261 SNX14Q9Y5W7 946 aa16.98■□□□□ 0.31
LETMD1-229ENST00000551261 SLC27A2O14975 620 aa16.97■□□□□ 0.31
LETMD1-229ENST00000551261 LDHBP07195 334 aaKnown RBP16.97■□□□□ 0.31
LETMD1-229ENST00000551261 CHRNA5P30532 468 aa16.97■□□□□ 0.31
LETMD1-229ENST00000551261 ALX1Q15699 326 aa16.97■□□□□ 0.31
LETMD1-229ENST00000551261 DZIP1Q86YF9 867 aaKnown RBP16.97■□□□□ 0.31
LETMD1-229ENST00000551261 SEC62Q99442 399 aaKnown RBP16.97■□□□□ 0.31
LETMD1-229ENST00000551261 PUS7LQ9H0K6 701 aaKnown RBP16.97■□□□□ 0.31
LETMD1-229ENST00000551261 PIM2Q9P1W9 311 aa16.97■□□□□ 0.31
LETMD1-229ENST00000551261 IQSEC3Q9UPP2 1182 aaPredicted RBP16.97■□□□□ 0.31
LETMD1-229ENST00000551261 LAMA4Q16363 1823 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms