RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 SEC13P55735 322 aa6.29□□□□□ -1.4
LSM3P2-201ENST00000551246 FOXK2Q01167 660 aa6.29□□□□□ -1.4
LSM3P2-201ENST00000551246 CENPCQ03188 943 aa6.29□□□□□ -1.4
LSM3P2-201ENST00000551246 TLR1Q15399 786 aa6.29□□□□□ -1.4
LSM3P2-201ENST00000551246 C11orf91Q3C1V1 193 aa6.29□□□□□ -1.4
LSM3P2-201ENST00000551246 CCDC93Q567U6 631 aa6.29□□□□□ -1.4
LSM3P2-201ENST00000551246 CCDC183Q5T5S1 534 aa6.29□□□□□ -1.4
LSM3P2-201ENST00000551246 DNMBPQ6XZF7 1577 aa6.29□□□□□ -1.4
LSM3P2-201ENST00000551246 SRLQ86TD4 932 aa6.29□□□□□ -1.4
LSM3P2-201ENST00000551246 CNPY4Q8N129 248 aa6.29□□□□□ -1.4
LSM3P2-201ENST00000551246 ZGPATQ8N5A5 531 aaKnown RBP6.29□□□□□ -1.4
LSM3P2-201ENST00000551246 TSEN2Q8NCE0 465 aaKnown RBP6.29□□□□□ -1.4
LSM3P2-201ENST00000551246 POLMQ9NP87 494 aaPredicted RBP6.29□□□□□ -1.4
LSM3P2-201ENST00000551246 ST7Q9NRC1 585 aa6.29□□□□□ -1.4
LSM3P2-201ENST00000551246 RAI14Q9P0K7 980 aa6.29□□□□□ -1.4
LSM3P2-201ENST00000551246 LCMT1Q9UIC8 334 aa6.29□□□□□ -1.4
LSM3P2-201ENST00000551246 JRKLQ9Y4A0 524 aa6.29□□□□□ -1.4
LSM3P2-201ENST00000551246 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.29□□□□□ -1.4
LSM3P2-201ENST00000551246 V9GYY5 206 aaPredicted RBP6.29□□□□□ -1.4
LSM3P2-201ENST00000551246 CROCC2H7BZ55 1655 aa6.29□□□□□ -1.4
LSM3P2-201ENST00000551246 ADGRB2O60241 1585 aa6.28□□□□□ -1.4
LSM3P2-201ENST00000551246 A0A1B0GUL7 405 aa6.28□□□□□ -1.4
LSM3P2-201ENST00000551246 A6NJY4 79 aa6.28□□□□□ -1.4
LSM3P2-201ENST00000551246 MCCP23508 829 aa6.28□□□□□ -1.4
LSM3P2-201ENST00000551246 MAGEA9P43362 315 aa6.28□□□□□ -1.4
LSM3P2-201ENST00000551246 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.28□□□□□ -1.4
LSM3P2-201ENST00000551246 REXO1L1PQ8IX06 675 aa6.28□□□□□ -1.4
LSM3P2-201ENST00000551246 CCDC146Q8IYE0 955 aa6.28□□□□□ -1.4
LSM3P2-201ENST00000551246 CCDC112Q8NEF3 446 aa6.28□□□□□ -1.4
LSM3P2-201ENST00000551246 GCC1Q96CN9 775 aa6.28□□□□□ -1.4
LSM3P2-201ENST00000551246 NLRP3Q96P20 1036 aa6.28□□□□□ -1.4
LSM3P2-201ENST00000551246 CEP89Q96ST8 783 aa6.28□□□□□ -1.4
LSM3P2-201ENST00000551246 SENP2Q9HC62 589 aa6.28□□□□□ -1.4
LSM3P2-201ENST00000551246 SLAIN2Q9P270 581 aa6.28□□□□□ -1.4
LSM3P2-201ENST00000551246 ZNF215Q9UL58 517 aaPredicted RBP6.28□□□□□ -1.4
LSM3P2-201ENST00000551246 SHPRHQ149N8 1683 aa6.28□□□□□ -1.4
LSM3P2-201ENST00000551246 ZNF644Q9H582 1327 aaPredicted RBP6.27□□□□□ -1.41
LSM3P2-201ENST00000551246 ERICH4A6NGS2 130 aa6.27□□□□□ -1.41
LSM3P2-201ENST00000551246 SOBPA7XYQ1 873 aa6.27□□□□□ -1.41
LSM3P2-201ENST00000551246 SPATA31C2B4DYI2 1134 aa6.27□□□□□ -1.41
LSM3P2-201ENST00000551246 BACH1O14867 736 aa6.27□□□□□ -1.41
LSM3P2-201ENST00000551246 GADD45BO75293 160 aaPredicted RBP6.27□□□□□ -1.41
LSM3P2-201ENST00000551246 PNMA6AP0CW24 399 aaPredicted RBP6.27□□□□□ -1.41
LSM3P2-201ENST00000551246 TNNT1P13805 278 aa6.27□□□□□ -1.41
LSM3P2-201ENST00000551246 TRIM27P14373 513 aa6.27□□□□□ -1.41
LSM3P2-201ENST00000551246 CDC25BP30305 580 aa6.27□□□□□ -1.41
LSM3P2-201ENST00000551246 HSP90AB3PQ58FF7 597 aa6.27□□□□□ -1.41
LSM3P2-201ENST00000551246 PLA2G4DQ86XP0 818 aa6.27□□□□□ -1.41
LSM3P2-201ENST00000551246 MSL3Q8N5Y2 521 aaKnown RBP6.27□□□□□ -1.41
LSM3P2-201ENST00000551246 GOLGA5Q8TBA6 731 aa6.27□□□□□ -1.41
LSM3P2-201ENST00000551246 FAM200AQ8TCP9 573 aa6.27□□□□□ -1.41
LSM3P2-201ENST00000551246 EXOC4Q96A65 974 aa6.27□□□□□ -1.41
LSM3P2-201ENST00000551246 KIFC2Q96AC6 838 aa6.27□□□□□ -1.41
LSM3P2-201ENST00000551246 RUNDC1Q96C34 613 aa6.27□□□□□ -1.41
LSM3P2-201ENST00000551246 SCHIP1Q9P0W5 487 aaPredicted RBP6.27□□□□□ -1.41
LSM3P2-201ENST00000551246 KNSTRNQ9Y448 316 aa6.27□□□□□ -1.41
LSM3P2-201ENST00000551246 IQGAP1P46940 1657 aa6.26□□□□□ -1.41
LSM3P2-201ENST00000551246 MYOM1P52179 1685 aa6.26□□□□□ -1.41
LSM3P2-201ENST00000551246 ELP1O95163 1332 aa6.26□□□□□ -1.41
LSM3P2-201ENST00000551246 IL16Q14005 1332 aa6.26□□□□□ -1.41
LSM3P2-201ENST00000551246 CCDC171Q6TFL3 1326 aa6.26□□□□□ -1.41
LSM3P2-201ENST00000551246 PPIP5K1Q6PFW1 1433 aa6.26□□□□□ -1.41
LSM3P2-201ENST00000551246 GPATCH8Q9UKJ3 1502 aaKnown RBP6.26□□□□□ -1.41
LSM3P2-201ENST00000551246 ANKRD33BA6NCL7 494 aa6.26□□□□□ -1.41
LSM3P2-201ENST00000551246 FIGNL2A6NMB9 653 aa6.26□□□□□ -1.41
LSM3P2-201ENST00000551246 GOLGA6L6A8MZA4 724 aa6.26□□□□□ -1.41
LSM3P2-201ENST00000551246 C21orf2O43822 256 aa6.26□□□□□ -1.41
LSM3P2-201ENST00000551246 APPP05067 770 aa6.26□□□□□ -1.41
LSM3P2-201ENST00000551246 MCM2P49736 904 aa6.26□□□□□ -1.41
LSM3P2-201ENST00000551246 GYS2P54840 703 aa6.26□□□□□ -1.41
LSM3P2-201ENST00000551246 POTEAQ6S8J7 498 aa6.26□□□□□ -1.41
LSM3P2-201ENST00000551246 ATF7IPQ6VMQ6 1270 aa6.26□□□□□ -1.41
LSM3P2-201ENST00000551246 TNS4Q8IZW8 715 aa6.26□□□□□ -1.41
LSM3P2-201ENST00000551246 RETREG2Q8NC44 543 aa6.26□□□□□ -1.41
LSM3P2-201ENST00000551246 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.26□□□□□ -1.41
LSM3P2-201ENST00000551246 MNS1Q8NEH6 495 aa6.26□□□□□ -1.41
LSM3P2-201ENST00000551246 CHAMP1Q96JM3 812 aa6.26□□□□□ -1.41
LSM3P2-201ENST00000551246 ZSCAN10Q96SZ4 725 aaPredicted RBP6.26□□□□□ -1.41
LSM3P2-201ENST00000551246 CXorf56Q9H5V9 222 aa6.26□□□□□ -1.41
LSM3P2-201ENST00000551246 A1CFQ9NQ94 594 aaKnown RBP6.26□□□□□ -1.41
LSM3P2-201ENST00000551246 BSDC1Q9NW68 430 aaPredicted RBP6.26□□□□□ -1.41
LSM3P2-201ENST00000551246 RRP15Q9Y3B9 282 aaKnown RBP6.26□□□□□ -1.41
LSM3P2-201ENST00000551246 CADPSQ9ULU8 1353 aa6.26□□□□□ -1.41
LSM3P2-201ENST00000551246 PDS5BQ9NTI5 1447 aa6.25□□□□□ -1.41
LSM3P2-201ENST00000551246 CDK13Q14004 1512 aaKnown RBP6.25□□□□□ -1.41
LSM3P2-201ENST00000551246 CARNS1A5YM72 827 aa6.25□□□□□ -1.41
LSM3P2-201ENST00000551246 CDK2AP1O14519 115 aa6.25□□□□□ -1.41
LSM3P2-201ENST00000551246 SMARCA5O60264 1052 aaPredicted RBP6.25□□□□□ -1.41
LSM3P2-201ENST00000551246 SLU7O95391 586 aaKnown RBP6.25□□□□□ -1.41
LSM3P2-201ENST00000551246 TUBB4AP04350 444 aa6.25□□□□□ -1.41
LSM3P2-201ENST00000551246 HCLS1P14317 486 aaPredicted RBP6.25□□□□□ -1.41
LSM3P2-201ENST00000551246 GSPT1P15170 499 aaKnown RBP6.25□□□□□ -1.41
LSM3P2-201ENST00000551246 PTGS1P23219 599 aa6.25□□□□□ -1.41
LSM3P2-201ENST00000551246 TPM4P67936 248 aa6.25□□□□□ -1.41
LSM3P2-201ENST00000551246 TRDNQ13061 729 aa6.25□□□□□ -1.41
LSM3P2-201ENST00000551246 ZSCAN26Q16670 478 aa6.25□□□□□ -1.41
LSM3P2-201ENST00000551246 SWI5Q1ZZU3 235 aa6.25□□□□□ -1.41
LSM3P2-201ENST00000551246 MCTP2Q6DN12 878 aa6.25□□□□□ -1.41
LSM3P2-201ENST00000551246 ZSCAN25Q6NSZ9 544 aa6.25□□□□□ -1.41
LSM3P2-201ENST00000551246 RBM43Q6ZSC3 357 aaKnown RBP6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms