RNA–Protein interactions for RNA: ENST00000550504.5

RAB5C-207, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-207ENST00000550504 SPATA5Q8NB90 893 aa12.52□□□□□ -0.41
RAB5C-207ENST00000550504 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.52□□□□□ -0.41
RAB5C-207ENST00000550504 COA1Q9GZY4 146 aa12.52□□□□□ -0.41
RAB5C-207ENST00000550504 DBNDD1Q9H9R9 158 aa12.52□□□□□ -0.41
RAB5C-207ENST00000550504 CD209Q9NNX6 404 aa12.52□□□□□ -0.41
RAB5C-207ENST00000550504 COL1A1P02452 1464 aaPredicted RBP12.52□□□□□ -0.41
RAB5C-207ENST00000550504 IARSP41252 1262 aaKnown RBP12.51□□□□□ -0.41
RAB5C-207ENST00000550504 GPR162Q16538 588 aa12.51□□□□□ -0.41
RAB5C-207ENST00000550504 CNTROBQ8N137 903 aa12.51□□□□□ -0.41
RAB5C-207ENST00000550504 TDRD7Q8NHU6 1098 aaKnown RBP12.51□□□□□ -0.41
RAB5C-207ENST00000550504 FBXW7Q969H0 707 aa12.51□□□□□ -0.41
RAB5C-207ENST00000550504 ANTXR1Q9H6X2 564 aa12.51□□□□□ -0.41
RAB5C-207ENST00000550504 PAG1Q9NWQ8 432 aa12.51□□□□□ -0.41
RAB5C-207ENST00000550504 DENND2AQ9ULE3 1009 aa12.51□□□□□ -0.41
RAB5C-207ENST00000550504 AKAP11Q9UKA4 1901 aa12.5□□□□□ -0.41
RAB5C-207ENST00000550504 MYH13Q9UKX3 1938 aa12.5□□□□□ -0.41
RAB5C-207ENST00000550504 SEMA3EO15041 775 aa12.5□□□□□ -0.41
RAB5C-207ENST00000550504 ECE2O60344 883 aa12.5□□□□□ -0.41
RAB5C-207ENST00000550504 CYP2E1P05181 493 aaPredicted RBP12.5□□□□□ -0.41
RAB5C-207ENST00000550504 IL1R1P14778 569 aa12.5□□□□□ -0.41
RAB5C-207ENST00000550504 C1QTNF8P60827 252 aa12.5□□□□□ -0.41
RAB5C-207ENST00000550504 TBC1D9Q6ZT07 1266 aa12.5□□□□□ -0.41
RAB5C-207ENST00000550504 LTBP3Q9NS15 1303 aa12.5□□□□□ -0.41
RAB5C-207ENST00000550504 COL4A5P29400 1685 aa12.49□□□□□ -0.41
RAB5C-207ENST00000550504 GTF2IP78347 998 aa12.49□□□□□ -0.41
RAB5C-207ENST00000550504 NIM1KQ8IY84 436 aa12.49□□□□□ -0.41
RAB5C-207ENST00000550504 EVI5LQ96CN4 794 aa12.49□□□□□ -0.41
RAB5C-207ENST00000550504 FSD1Q9BTV5 496 aa12.49□□□□□ -0.41
RAB5C-207ENST00000550504 VPS33BQ9H267 617 aa12.49□□□□□ -0.41
RAB5C-207ENST00000550504 PIH1D3Q9NQM4 214 aaKnown RBP12.49□□□□□ -0.41
RAB5C-207ENST00000550504 KCNQ5Q9NR82 932 aa12.49□□□□□ -0.41
RAB5C-207ENST00000550504 PRELPP51888 382 aa12.48□□□□□ -0.41
RAB5C-207ENST00000550504 PODNQ7Z5L7 613 aa12.48□□□□□ -0.41
RAB5C-207ENST00000550504 ABCF2Q9UG63 623 aa12.48□□□□□ -0.41
RAB5C-207ENST00000550504 AK9Q5TCS8 1911 aa12.48□□□□□ -0.41
RAB5C-207ENST00000550504 PDS5AQ29RF7 1337 aaKnown RBP12.47□□□□□ -0.41
RAB5C-207ENST00000550504 YDJCA8MPS7 323 aa12.47□□□□□ -0.41
RAB5C-207ENST00000550504 IDH1O75874 414 aaKnown RBP12.47□□□□□ -0.41
RAB5C-207ENST00000550504 TTF1Q15361 905 aaPredicted RBP12.47□□□□□ -0.41
RAB5C-207ENST00000550504 KBTBD3Q8NAB2 608 aa12.47□□□□□ -0.41
RAB5C-207ENST00000550504 WDR66Q8TBY9 1149 aa12.47□□□□□ -0.41
RAB5C-207ENST00000550504 JDP2Q8WYK2 163 aa12.47□□□□□ -0.41
RAB5C-207ENST00000550504 LRP2BPQ9P2M1 347 aa12.47□□□□□ -0.41
RAB5C-207ENST00000550504 FAM205AQ6ZU69 1335 aa12.46□□□□□ -0.41
RAB5C-207ENST00000550504 CDC45O75419 566 aa12.46□□□□□ -0.41
RAB5C-207ENST00000550504 RAD17O75943 681 aa12.46□□□□□ -0.41
RAB5C-207ENST00000550504 CHGBP05060 677 aa12.46□□□□□ -0.41
RAB5C-207ENST00000550504 MFSD14BQ5SR56 506 aa12.46□□□□□ -0.41
RAB5C-207ENST00000550504 TTLL5Q6EMB2 1281 aa12.46□□□□□ -0.41
RAB5C-207ENST00000550504 MXD3Q9BW11 206 aa12.46□□□□□ -0.41
RAB5C-207ENST00000550504 RAI14Q9P0K7 980 aa12.46□□□□□ -0.41
RAB5C-207ENST00000550504 ZNRF3Q9ULT6 936 aa12.46□□□□□ -0.41
RAB5C-207ENST00000550504 SCN9AQ15858 1988 aa12.46□□□□□ -0.41
RAB5C-207ENST00000550504 CCDC88AQ3V6T2 1871 aa12.46□□□□□ -0.42
RAB5C-207ENST00000550504 MYO5AQ9Y4I1 1855 aaKnown RBP12.46□□□□□ -0.42
RAB5C-207ENST00000550504 USP17L3A6NCW0 530 aa12.45□□□□□ -0.42
RAB5C-207ENST00000550504 USP17L4A6NCW7 530 aa12.45□□□□□ -0.42
RAB5C-207ENST00000550504 ZBTB22O15209 634 aa12.45□□□□□ -0.42
RAB5C-207ENST00000550504 LMNB1P20700 586 aa12.45□□□□□ -0.42
RAB5C-207ENST00000550504 PRDX5P30044 214 aa12.45□□□□□ -0.42
RAB5C-207ENST00000550504 GRIK5Q16478 980 aa12.45□□□□□ -0.42
RAB5C-207ENST00000550504 SLFNL1Q499Z3 407 aa12.45□□□□□ -0.42
RAB5C-207ENST00000550504 USP17L1Q7RTZ2 530 aa12.45□□□□□ -0.42
RAB5C-207ENST00000550504 DIAPH3Q9NSV4 1193 aa12.45□□□□□ -0.42
RAB5C-207ENST00000550504 SALL1Q9NSC2 1324 aa12.44□□□□□ -0.42
RAB5C-207ENST00000550504 GRIN3BO60391 1043 aa12.44□□□□□ -0.42
RAB5C-207ENST00000550504 LDHBP07195 334 aaKnown RBP12.44□□□□□ -0.42
RAB5C-207ENST00000550504 CHMLP26374 656 aa12.44□□□□□ -0.42
RAB5C-207ENST00000550504 MAP3K12Q12852 859 aa12.44□□□□□ -0.42
RAB5C-207ENST00000550504 DACT2Q5SW24 774 aa12.44□□□□□ -0.42
RAB5C-207ENST00000550504 SLC9C2Q5TAH2 1124 aa12.44□□□□□ -0.42
RAB5C-207ENST00000550504 STRIP1Q5VSL9 837 aa12.44□□□□□ -0.42
RAB5C-207ENST00000550504 SPTY2D1Q68D10 685 aaPredicted RBP12.44□□□□□ -0.42
RAB5C-207ENST00000550504 ERICH6Q7L0X2 663 aa12.44□□□□□ -0.42
RAB5C-207ENST00000550504 ZGPATQ8N5A5 531 aaKnown RBP12.44□□□□□ -0.42
RAB5C-207ENST00000550504 CERS5Q8N5B7 392 aa12.44□□□□□ -0.42
RAB5C-207ENST00000550504 TBC1D22AQ8WUA7 517 aa12.44□□□□□ -0.42
RAB5C-207ENST00000550504 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.44□□□□□ -0.42
RAB5C-207ENST00000550504 RNF181Q9P0P0 153 aa12.44□□□□□ -0.42
RAB5C-207ENST00000550504 DOCK2Q92608 1830 aa12.44□□□□□ -0.42
RAB5C-207ENST00000550504 SBF1O95248 1867 aa12.43□□□□□ -0.42
RAB5C-207ENST00000550504 F8W031 263 aaPredicted RBP12.43□□□□□ -0.42
RAB5C-207ENST00000550504 PSMD14O00487 310 aa12.43□□□□□ -0.42
RAB5C-207ENST00000550504 RNF113AO15541 343 aaKnown RBP12.43□□□□□ -0.42
RAB5C-207ENST00000550504 PDE6AP16499 860 aa12.43□□□□□ -0.42
RAB5C-207ENST00000550504 CXCL9Q07325 125 aa12.43□□□□□ -0.42
RAB5C-207ENST00000550504 NMIQ13287 307 aaPredicted RBP12.43□□□□□ -0.42
RAB5C-207ENST00000550504 LRRFIP1Q32MZ4 808 aaKnown RBP12.43□□□□□ -0.42
RAB5C-207ENST00000550504 ZSCAN25Q6NSZ9 544 aa12.43□□□□□ -0.42
RAB5C-207ENST00000550504 CASC1Q6TDU7 716 aa12.43□□□□□ -0.42
RAB5C-207ENST00000550504 DZIP1Q86YF9 867 aaKnown RBP12.43□□□□□ -0.42
RAB5C-207ENST00000550504 MAGEB6Q8N7X4 407 aa12.43□□□□□ -0.42
RAB5C-207ENST00000550504 FAM227BQ96M60 508 aa12.43□□□□□ -0.42
RAB5C-207ENST00000550504 ZNF532Q9HCE3 1301 aa12.42□□□□□ -0.42
RAB5C-207ENST00000550504 HIP1O00291 1037 aa12.42□□□□□ -0.42
RAB5C-207ENST00000550504 CYP7A1P22680 504 aa12.42□□□□□ -0.42
RAB5C-207ENST00000550504 ADD2P35612 726 aa12.42□□□□□ -0.42
RAB5C-207ENST00000550504 EIF6P56537 245 aaKnown RBP12.42□□□□□ -0.42
RAB5C-207ENST00000550504 MECOMQ03112 1051 aa12.42□□□□□ -0.42
RAB5C-207ENST00000550504 C8orf34Q49A92 452 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms