RNA–Protein interactions for RNA: ENST00000550325.5

VDR-208, Transcript of vitamin D receptor, humanhuman

TSL 1 (best) BASIC

Gene VDR, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-208ENST00000550325 BICC1Q9H694 974 aaKnown RBP13.94□□□□□ -0.18
VDR-208ENST00000550325 ERLIN1O75477 346 aa13.94□□□□□ -0.18
VDR-208ENST00000550325 TSPOAP1O95153 1857 aa13.93□□□□□ -0.18
VDR-208ENST00000550325 TFRCP02786 760 aaKnown RBP13.93□□□□□ -0.18
VDR-208ENST00000550325 RABGGTAQ92696 567 aa13.93□□□□□ -0.18
VDR-208ENST00000550325 ARHGAP6O43182 974 aa13.93□□□□□ -0.18
VDR-208ENST00000550325 SYKP43405 635 aa13.93□□□□□ -0.18
VDR-208ENST00000550325 MYL5Q02045 173 aa13.93□□□□□ -0.18
VDR-208ENST00000550325 HDXQ7Z353 690 aa13.93□□□□□ -0.18
VDR-208ENST00000550325 NEUROD6Q96NK8 337 aa13.93□□□□□ -0.18
VDR-208ENST00000550325 PFKFB1P16118 471 aa13.93□□□□□ -0.18
VDR-208ENST00000550325 GPHNQ9NQX3 736 aaPredicted RBP13.93□□□□□ -0.18
VDR-208ENST00000550325 ARHGEF10O15013 1369 aa13.93□□□□□ -0.18
VDR-208ENST00000550325 LMTK2Q8IWU2 1503 aa13.92□□□□□ -0.18
VDR-208ENST00000550325 SIGLEC1Q9BZZ2 1709 aa13.92□□□□□ -0.18
VDR-208ENST00000550325 CTDNEP1O95476 244 aa13.92□□□□□ -0.18
VDR-208ENST00000550325 NLRP6P59044 892 aa13.92□□□□□ -0.18
VDR-208ENST00000550325 HAND2P61296 217 aa13.92□□□□□ -0.18
VDR-208ENST00000550325 AKAP17AQ02040 695 aaKnown RBP13.92□□□□□ -0.18
VDR-208ENST00000550325 MTF1Q14872 753 aa13.92□□□□□ -0.18
VDR-208ENST00000550325 SUCLG2Q96I99 432 aa13.92□□□□□ -0.18
VDR-208ENST00000550325 U3KPZ7 1027 aaPredicted RBP13.92□□□□□ -0.18
VDR-208ENST00000550325 IBSPP21815 317 aaPredicted RBP13.92□□□□□ -0.18
VDR-208ENST00000550325 PSME1Q06323 249 aa13.92□□□□□ -0.18
VDR-208ENST00000550325 TRMT44Q8IYL2 757 aaKnown RBP13.92□□□□□ -0.18
VDR-208ENST00000550325 ABCB6Q9NP58 842 aa13.92□□□□□ -0.18
VDR-208ENST00000550325 MRFAP1Q9Y605 127 aa13.92□□□□□ -0.18
VDR-208ENST00000550325 PRR36Q9H6K5 1346 aa13.92□□□□□ -0.18
VDR-208ENST00000550325 KIF13AQ9H1H9 1805 aa13.92□□□□□ -0.18
VDR-208ENST00000550325 SPECC1Q5M775 1068 aa13.92□□□□□ -0.18
VDR-208ENST00000550325 ZNF569Q5MCW4 686 aa13.92□□□□□ -0.18
VDR-208ENST00000550325 CNNM3Q8NE01 707 aa13.92□□□□□ -0.18
VDR-208ENST00000550325 LGR6Q9HBX8 967 aa13.92□□□□□ -0.18
VDR-208ENST00000550325 KCND1Q9NSA2 647 aa13.92□□□□□ -0.18
VDR-208ENST00000550325 A0A0G2JLW4 131 aa13.91□□□□□ -0.18
VDR-208ENST00000550325 PFKFB2O60825 505 aa13.91□□□□□ -0.18
VDR-208ENST00000550325 MAP3K9P80192 1104 aa13.91□□□□□ -0.18
VDR-208ENST00000550325 DHX8Q14562 1220 aaKnown RBP13.91□□□□□ -0.18
VDR-208ENST00000550325 DHX32Q7L7V1 743 aaKnown RBP13.91□□□□□ -0.18
VDR-208ENST00000550325 SECISBP2LQ93073 1101 aaKnown RBP13.91□□□□□ -0.18
VDR-208ENST00000550325 KIDINS220Q9ULH0 1771 aa13.91□□□□□ -0.18
VDR-208ENST00000550325 MAGEA9P43362 315 aa13.91□□□□□ -0.18
VDR-208ENST00000550325 NCAPHQ15003 741 aa13.91□□□□□ -0.18
VDR-208ENST00000550325 LINC00301Q8NCQ3 95 aa13.91□□□□□ -0.18
VDR-208ENST00000550325 STOX1Q6ZVD7 989 aa13.91□□□□□ -0.18
VDR-208ENST00000550325 KCNG4Q8TDN1 519 aa13.91□□□□□ -0.18
VDR-208ENST00000550325 CCDC151A5D8V7 595 aa13.9□□□□□ -0.18
VDR-208ENST00000550325 KIF5CO60282 957 aa13.9□□□□□ -0.18
VDR-208ENST00000550325 ATP2B1P20020 1258 aa13.9□□□□□ -0.18
VDR-208ENST00000550325 PROSER3Q2NL68 480 aa13.9□□□□□ -0.18
VDR-208ENST00000550325 RBM33Q96EV2 1170 aaKnown RBP13.9□□□□□ -0.18
VDR-208ENST00000550325 EID1Q9Y6B2 187 aa13.9□□□□□ -0.18
VDR-208ENST00000550325 ARAP3Q8WWN8 1544 aa13.9□□□□□ -0.18
VDR-208ENST00000550325 MNAT1P51948 309 aa13.9□□□□□ -0.18
VDR-208ENST00000550325 ZNF827Q17R98 1081 aa13.9□□□□□ -0.18
VDR-208ENST00000550325 MPRIPQ6WCQ1 1025 aa13.9□□□□□ -0.18
VDR-208ENST00000550325 RIC3Q7Z5B4 369 aa13.9□□□□□ -0.18
VDR-208ENST00000550325 ILDR1Q86SU0 546 aaPredicted RBP13.9□□□□□ -0.18
VDR-208ENST00000550325 VSTM4Q8IW00 320 aa13.9□□□□□ -0.18
VDR-208ENST00000550325 PPM1EQ8WY54 764 aa13.9□□□□□ -0.18
VDR-208ENST00000550325 MYCBPQ99417 103 aaPredicted RBP13.9□□□□□ -0.18
VDR-208ENST00000550325 HINFPQ9BQA5 517 aa13.9□□□□□ -0.18
VDR-208ENST00000550325 FAM204AQ9H8W3 233 aa13.9□□□□□ -0.18
VDR-208ENST00000550325 USP42Q9H9J4 1324 aaKnown RBP13.89□□□□□ -0.19
VDR-208ENST00000550325 BTBD11A6QL63 1104 aa13.89□□□□□ -0.19
VDR-208ENST00000550325 NPHP4O75161 1426 aaPredicted RBP13.89□□□□□ -0.19
VDR-208ENST00000550325 SOWAHDA6NJG2 315 aa13.89□□□□□ -0.19
VDR-208ENST00000550325 BRD3Q15059 726 aa13.89□□□□□ -0.19
VDR-208ENST00000550325 MCMDC2Q4G0Z9 681 aa13.89□□□□□ -0.19
VDR-208ENST00000550325 AXDND1Q5T1B0 1012 aaPredicted RBP13.89□□□□□ -0.19
VDR-208ENST00000550325 KLHL10Q6JEL2 608 aa13.89□□□□□ -0.19
VDR-208ENST00000550325 PNKPQ96T60 521 aa13.89□□□□□ -0.19
VDR-208ENST00000550325 FRMPD1Q5SYB0 1578 aa13.89□□□□□ -0.19
VDR-208ENST00000550325 MYL6BP14649 208 aa13.89□□□□□ -0.19
VDR-208ENST00000550325 LIG3P49916 1009 aa13.89□□□□□ -0.19
VDR-208ENST00000550325 LONRF3Q496Y0 759 aa13.89□□□□□ -0.19
VDR-208ENST00000550325 SMARCC2Q8TAQ2 1214 aa13.89□□□□□ -0.19
VDR-208ENST00000550325 CLIC6Q96NY7 704 aa13.89□□□□□ -0.19
VDR-208ENST00000550325 LLPHQ9BRT6 129 aaKnown RBP13.89□□□□□ -0.19
VDR-208ENST00000550325 A0A0U1RQJ8 604 aa13.88□□□□□ -0.19
VDR-208ENST00000550325 GOLGA6L9A6NEM1 432 aa13.88□□□□□ -0.19
VDR-208ENST00000550325 GOLIM4O00461 696 aa13.88□□□□□ -0.19
VDR-208ENST00000550325 ATRIPQ8WXE1 791 aa13.88□□□□□ -0.19
VDR-208ENST00000550325 RTEL1Q9NZ71 1219 aa13.88□□□□□ -0.19
VDR-208ENST00000550325 ADGRL3Q9HAR2 1447 aa13.88□□□□□ -0.19
VDR-208ENST00000550325 RSRC2Q7L4I2 434 aaKnown RBP13.88□□□□□ -0.19
VDR-208ENST00000550325 MRPL44Q9H9J2 332 aaKnown RBP13.88□□□□□ -0.19
VDR-208ENST00000550325 ATG3Q9NT62 314 aa13.88□□□□□ -0.19
VDR-208ENST00000550325 GOLGA8BA8MQT2 603 aa13.88□□□□□ -0.19
VDR-208ENST00000550325 ALDH1L1O75891 902 aa13.88□□□□□ -0.19
VDR-208ENST00000550325 CCDC175P0C221 793 aa13.88□□□□□ -0.19
VDR-208ENST00000550325 AKAP2Q9Y2D5 859 aa13.88□□□□□ -0.19
VDR-208ENST00000550325 RIMBP3CA6NJZ7 1639 aa13.88□□□□□ -0.19
VDR-208ENST00000550325 RIMBP3BA6NNM3 1639 aa13.88□□□□□ -0.19
VDR-208ENST00000550325 RIMBP3Q9UFD9 1639 aa13.88□□□□□ -0.19
VDR-208ENST00000550325 PRAMEF22A3QJZ6 481 aa13.87□□□□□ -0.19
VDR-208ENST00000550325 GRM8O00222 908 aa13.87□□□□□ -0.19
VDR-208ENST00000550325 PDIA3P30101 505 aaKnown RBP13.87□□□□□ -0.19
VDR-208ENST00000550325 NBPF6Q5VWK0 638 aa13.87□□□□□ -0.19
VDR-208ENST00000550325 SRGAP1Q7Z6B7 1085 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms