RNA–Protein interactions for RNA: ENST00000550023.5

KRR1-203, Transcript of KRR1, small subunit processome component homolog, humanhuman

TSL 2

Gene KRR1, Length 855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRR1-203ENST00000550023 CPSF1Q10570 1443 aaKnown RBP6.91□□□□□ -1.3
KRR1-203ENST00000550023 ARHGAP23Q9P227 1491 aa6.91□□□□□ -1.3
KRR1-203ENST00000550023 VIRMAQ69YN4 1812 aaKnown RBP6.9□□□□□ -1.3
KRR1-203ENST00000550023 BICDL1Q6ZP65 573 aa6.9□□□□□ -1.3
KRR1-203ENST00000550023 FMR1NBQ8N0W7 255 aaPredicted RBP6.9□□□□□ -1.3
KRR1-203ENST00000550023 ZIC5Q96T25 663 aa6.9□□□□□ -1.3
KRR1-203ENST00000550023 ZDHHC3Q9NYG2 299 aa6.9□□□□□ -1.3
KRR1-203ENST00000550023 AATKQ6ZMQ8 1374 aa6.9□□□□□ -1.31
KRR1-203ENST00000550023 USP54Q70EL1 1684 aa6.9□□□□□ -1.31
KRR1-203ENST00000550023 NALCNQ8IZF0 1738 aa6.9□□□□□ -1.31
KRR1-203ENST00000550023 ANP32AP39687 249 aaKnown RBP6.89□□□□□ -1.31
KRR1-203ENST00000550023 PDE3AQ14432 1141 aa6.89□□□□□ -1.31
KRR1-203ENST00000550023 WDR63Q8IWG1 891 aa6.89□□□□□ -1.31
KRR1-203ENST00000550023 EXOC6Q8TAG9 804 aa6.89□□□□□ -1.31
KRR1-203ENST00000550023 RUNDC1Q96C34 613 aa6.89□□□□□ -1.31
KRR1-203ENST00000550023 SIRT1Q96EB6 747 aa6.89□□□□□ -1.31
KRR1-203ENST00000550023 TERF2IPQ9NYB0 399 aa6.89□□□□□ -1.31
KRR1-203ENST00000550023 TRAK1Q9UPV9 953 aa6.89□□□□□ -1.31
KRR1-203ENST00000550023 IL16Q14005 1332 aa6.89□□□□□ -1.31
KRR1-203ENST00000550023 AKAP12Q02952 1782 aa6.89□□□□□ -1.31
KRR1-203ENST00000550023 ITSN1Q15811 1721 aa6.88□□□□□ -1.31
KRR1-203ENST00000550023 TNRQ92752 1358 aa6.88□□□□□ -1.31
KRR1-203ENST00000550023 PLEKHG1Q9ULL1 1385 aa6.88□□□□□ -1.31
KRR1-203ENST00000550023 GSC2O15499 205 aa6.88□□□□□ -1.31
KRR1-203ENST00000550023 C8AP07357 584 aa6.88□□□□□ -1.31
KRR1-203ENST00000550023 LCE4AQ5TA78 99 aa6.88□□□□□ -1.31
KRR1-203ENST00000550023 OGFOD2Q6N063 350 aa6.88□□□□□ -1.31
KRR1-203ENST00000550023 MORC1Q86VD1 984 aa6.88□□□□□ -1.31
KRR1-203ENST00000550023 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.88□□□□□ -1.31
KRR1-203ENST00000550023 ETNK1Q9HBU6 452 aa6.88□□□□□ -1.31
KRR1-203ENST00000550023 JPH1Q9HDC5 661 aaPredicted RBP6.88□□□□□ -1.31
KRR1-203ENST00000550023 XRN1Q8IZH2 1706 aaKnown RBP6.87□□□□□ -1.31
KRR1-203ENST00000550023 TMEM2Q9UHN6 1383 aa6.87□□□□□ -1.31
KRR1-203ENST00000550023 NOS3P29474 1203 aa6.87□□□□□ -1.31
KRR1-203ENST00000550023 OVOS2A0A0J9YW53 1432 aa6.86□□□□□ -1.31
KRR1-203ENST00000550023 OVOS2Q6IE36 1432 aa6.86□□□□□ -1.31
KRR1-203ENST00000550023 ADAMTS13Q76LX8 1427 aa6.86□□□□□ -1.31
KRR1-203ENST00000550023 MAPK8IP3Q9UPT6 1336 aa6.86□□□□□ -1.31
KRR1-203ENST00000550023 APAF1O14727 1248 aa6.86□□□□□ -1.31
KRR1-203ENST00000550023 GRIK1P39086 918 aa6.86□□□□□ -1.31
KRR1-203ENST00000550023 FAM69CQ0P6D2 419 aa6.86□□□□□ -1.31
KRR1-203ENST00000550023 CNGB1Q14028 1251 aaPredicted RBP6.86□□□□□ -1.31
KRR1-203ENST00000550023 WWC1Q8IX03 1113 aa6.86□□□□□ -1.31
KRR1-203ENST00000550023 MEGF10Q96KG7 1140 aa6.86□□□□□ -1.31
KRR1-203ENST00000550023 CRBNQ96SW2 442 aa6.86□□□□□ -1.31
KRR1-203ENST00000550023 MYH16Q9H6N6 1097 aa6.86□□□□□ -1.31
KRR1-203ENST00000550023 NOP58Q9Y2X3 529 aaKnown RBP6.86□□□□□ -1.31
KRR1-203ENST00000550023 ZNF142P52746 1687 aaPredicted RBP6.85□□□□□ -1.31
KRR1-203ENST00000550023 MED26O95402 600 aa6.85□□□□□ -1.31
KRR1-203ENST00000550023 PDE4DQ08499 809 aa6.85□□□□□ -1.31
KRR1-203ENST00000550023 SKIV2LQ15477 1246 aaKnown RBP6.85□□□□□ -1.31
KRR1-203ENST00000550023 HDGFL2Q7Z4V5 671 aaPredicted RBP6.85□□□□□ -1.31
KRR1-203ENST00000550023 DMRTC2Q8IXT2 367 aaPredicted RBP6.85□□□□□ -1.31
KRR1-203ENST00000550023 ZNF428Q96B54 188 aa6.85□□□□□ -1.31
KRR1-203ENST00000550023 PRAM1Q96QH2 718 aa6.85□□□□□ -1.31
KRR1-203ENST00000550023 SLC12A5Q9H2X9 1139 aa6.85□□□□□ -1.31
KRR1-203ENST00000550023 RGPD1P0DJD0 1748 aa6.84□□□□□ -1.31
KRR1-203ENST00000550023 TSPOAP1O95153 1857 aa6.84□□□□□ -1.31
KRR1-203ENST00000550023 TMEM132EQ6IEE7 984 aa6.84□□□□□ -1.31
KRR1-203ENST00000550023 INTS5Q6P9B9 1019 aaKnown RBP6.84□□□□□ -1.31
KRR1-203ENST00000550023 DTWD1Q8N5C7 304 aa6.84□□□□□ -1.31
KRR1-203ENST00000550023 IPO9Q96P70 1041 aaKnown RBP6.84□□□□□ -1.31
KRR1-203ENST00000550023 SLC30A3Q99726 388 aa6.84□□□□□ -1.31
KRR1-203ENST00000550023 BACH2Q9BYV9 841 aa6.84□□□□□ -1.31
KRR1-203ENST00000550023 PNNQ9H307 717 aaKnown RBP6.84□□□□□ -1.31
KRR1-203ENST00000550023 SLC24A3Q9HC58 644 aa6.84□□□□□ -1.31
KRR1-203ENST00000550023 NEUROD4Q9HD90 331 aa6.84□□□□□ -1.31
KRR1-203ENST00000550023 ANKARQ7Z5J8 1434 aa6.84□□□□□ -1.32
KRR1-203ENST00000550023 PIK3R4Q99570 1358 aa6.83□□□□□ -1.32
KRR1-203ENST00000550023 WNT11O96014 354 aa6.83□□□□□ -1.32
KRR1-203ENST00000550023 TGFB1P01137 390 aa6.83□□□□□ -1.32
KRR1-203ENST00000550023 MTHFSP49914 203 aa6.83□□□□□ -1.32
KRR1-203ENST00000550023 SPEM2Q0P670 501 aa6.83□□□□□ -1.32
KRR1-203ENST00000550023 USP4Q13107 963 aa6.83□□□□□ -1.32
KRR1-203ENST00000550023 NR1H3Q13133 447 aa6.83□□□□□ -1.32
KRR1-203ENST00000550023 FBXO31Q5XUX0 539 aaPredicted RBP6.83□□□□□ -1.32
KRR1-203ENST00000550023 ERICH6Q7L0X2 663 aa6.83□□□□□ -1.32
KRR1-203ENST00000550023 POU5F2Q8N7G0 328 aa6.83□□□□□ -1.32
KRR1-203ENST00000550023 CDCA7Q9BWT1 371 aaPredicted RBP6.83□□□□□ -1.32
KRR1-203ENST00000550023 LRRC37A3O60309 1634 aa6.83□□□□□ -1.32
KRR1-203ENST00000550023 METP08581 1390 aa6.82□□□□□ -1.32
KRR1-203ENST00000550023 KIF16BQ96L93 1317 aa6.82□□□□□ -1.32
KRR1-203ENST00000550023 SRPK2P78362 688 aaKnown RBP6.82□□□□□ -1.32
KRR1-203ENST00000550023 CCDC146Q8IYE0 955 aa6.82□□□□□ -1.32
KRR1-203ENST00000550023 TCP11L2Q8N4U5 519 aa6.82□□□□□ -1.32
KRR1-203ENST00000550023 NUDT8Q8WV74 236 aa6.82□□□□□ -1.32
KRR1-203ENST00000550023 CLUAP1Q96AJ1 413 aa6.82□□□□□ -1.32
KRR1-203ENST00000550023 DDRGK1Q96HY6 314 aa6.82□□□□□ -1.32
KRR1-203ENST00000550023 PLEKHF1Q96S99 279 aa6.82□□□□□ -1.32
KRR1-203ENST00000550023 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.82□□□□□ -1.32
KRR1-203ENST00000550023 TRIM34Q9BYJ4 488 aa6.82□□□□□ -1.32
KRR1-203ENST00000550023 SSH2Q76I76 1423 aa6.82□□□□□ -1.32
KRR1-203ENST00000550023 FER1L4A9Z1Z3 1794 aa6.82□□□□□ -1.32
KRR1-203ENST00000550023 KIF24Q5T7B8 1368 aa6.82□□□□□ -1.32
KRR1-203ENST00000550023 USP31Q70CQ4 1352 aa6.82□□□□□ -1.32
KRR1-203ENST00000550023 LMTK3Q96Q04 1460 aa6.81□□□□□ -1.32
KRR1-203ENST00000550023 STAU1O95793 577 aaKnown RBP6.81□□□□□ -1.32
KRR1-203ENST00000550023 RARSP54136 660 aaKnown RBP6.81□□□□□ -1.32
KRR1-203ENST00000550023 BRPF1P55201 1214 aaPredicted RBP6.81□□□□□ -1.32
KRR1-203ENST00000550023 CALD1Q05682 793 aaKnown RBP6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms