RNA–Protein interactions for RNA: ENST00000549842.1

CPNE8-206, Transcript of copine 8, humanhuman

TSL 2

Gene CPNE8, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-206ENST00000549842 ADGRE1Q14246 886 aa6.66□□□□□ -1.34
CPNE8-206ENST00000549842 GRIK4Q16099 956 aa6.66□□□□□ -1.34
CPNE8-206ENST00000549842 TMEM130Q8N3G9 435 aa6.66□□□□□ -1.34
CPNE8-206ENST00000549842 SREK1Q8WXA9 508 aaKnown RBP6.66□□□□□ -1.34
CPNE8-206ENST00000549842 CSRNP1Q96S65 589 aa6.66□□□□□ -1.34
CPNE8-206ENST00000549842 SPOCK3Q9BQ16 436 aa6.66□□□□□ -1.34
CPNE8-206ENST00000549842 SOX13Q9UN79 622 aa6.66□□□□□ -1.34
CPNE8-206ENST00000549842 A0A1W2PP55 124 aa6.65□□□□□ -1.34
CPNE8-206ENST00000549842 ACPPP15309 386 aa6.65□□□□□ -1.34
CPNE8-206ENST00000549842 ATP2B2Q01814 1243 aa6.65□□□□□ -1.34
CPNE8-206ENST00000549842 ORC1Q13415 861 aa6.65□□□□□ -1.34
CPNE8-206ENST00000549842 GPAT2Q6NUI2 795 aa6.65□□□□□ -1.34
CPNE8-206ENST00000549842 FAM117BQ6P1L5 589 aa6.65□□□□□ -1.34
CPNE8-206ENST00000549842 ADAMTSL4Q6UY14 1074 aa6.65□□□□□ -1.34
CPNE8-206ENST00000549842 CCNJLQ8IV13 435 aa6.65□□□□□ -1.34
CPNE8-206ENST00000549842 KLHL23Q8NBE8 558 aa6.65□□□□□ -1.34
CPNE8-206ENST00000549842 BSNDQ8WZ55 320 aa6.65□□□□□ -1.34
CPNE8-206ENST00000549842 LACRTQ9GZZ8 138 aa6.65□□□□□ -1.34
CPNE8-206ENST00000549842 MRS2Q9HD23 443 aa6.65□□□□□ -1.34
CPNE8-206ENST00000549842 OSGEPQ9NPF4 335 aa6.65□□□□□ -1.34
CPNE8-206ENST00000549842 H3BRJ5 948 aa6.64□□□□□ -1.35
CPNE8-206ENST00000549842 POLR3DP05423 398 aaPredicted RBP6.64□□□□□ -1.35
CPNE8-206ENST00000549842 ERCC5P28715 1186 aaPredicted RBP6.64□□□□□ -1.35
CPNE8-206ENST00000549842 CABP4P57796 275 aa6.64□□□□□ -1.35
CPNE8-206ENST00000549842 PIP4K2BP78356 416 aa6.64□□□□□ -1.35
CPNE8-206ENST00000549842 TMC4Q7Z404 712 aa6.64□□□□□ -1.35
CPNE8-206ENST00000549842 CCDC74AQ96AQ1 378 aa6.64□□□□□ -1.35
CPNE8-206ENST00000549842 DUSP9Q99956 384 aaKnown RBP6.64□□□□□ -1.35
CPNE8-206ENST00000549842 PARP2Q9UGN5 583 aa6.64□□□□□ -1.35
CPNE8-206ENST00000549842 FSCN2O14926 492 aa6.63□□□□□ -1.35
CPNE8-206ENST00000549842 SORBS3O60504 671 aa6.63□□□□□ -1.35
CPNE8-206ENST00000549842 EPHA1P21709 976 aa6.63□□□□□ -1.35
CPNE8-206ENST00000549842 GATA4P43694 442 aa6.63□□□□□ -1.35
CPNE8-206ENST00000549842 DAB2P98082 770 aa6.63□□□□□ -1.35
CPNE8-206ENST00000549842 NAALADL2Q58DX5 795 aa6.63□□□□□ -1.35
CPNE8-206ENST00000549842 USPL1Q5W0Q7 1092 aa6.63□□□□□ -1.35
CPNE8-206ENST00000549842 TMEM87AQ8NBN3 555 aa6.63□□□□□ -1.35
CPNE8-206ENST00000549842 HHIPQ96QV1 700 aa6.63□□□□□ -1.35
CPNE8-206ENST00000549842 TCF12Q99081 682 aa6.63□□□□□ -1.35
CPNE8-206ENST00000549842 SOX17Q9H6I2 414 aaPredicted RBP6.63□□□□□ -1.35
CPNE8-206ENST00000549842 SH2B1Q9NRF2 756 aaPredicted RBP6.63□□□□□ -1.35
CPNE8-206ENST00000549842 LATS2Q9NRM7 1088 aa6.63□□□□□ -1.35
CPNE8-206ENST00000549842 LINC01387J3KSC0 135 aa6.62□□□□□ -1.35
CPNE8-206ENST00000549842 TRPA1O75762 1119 aa6.62□□□□□ -1.35
CPNE8-206ENST00000549842 HDLBPQ00341 1268 aaKnown RBP6.62□□□□□ -1.35
CPNE8-206ENST00000549842 PTPN12Q05209 780 aaKnown RBP6.62□□□□□ -1.35
CPNE8-206ENST00000549842 PSMD2Q13200 908 aa6.62□□□□□ -1.35
CPNE8-206ENST00000549842 MBTPS1Q14703 1052 aa6.62□□□□□ -1.35
CPNE8-206ENST00000549842 SF3A1Q15459 793 aaKnown RBP6.62□□□□□ -1.35
CPNE8-206ENST00000549842 ENOX2Q16206 610 aaKnown RBP6.62□□□□□ -1.35
CPNE8-206ENST00000549842 ALG1LQ6GMV1 187 aa6.62□□□□□ -1.35
CPNE8-206ENST00000549842 PRPF40BQ6NWY9 871 aaKnown RBP6.62□□□□□ -1.35
CPNE8-206ENST00000549842 VN1R5Q7Z5H4 357 aa6.62□□□□□ -1.35
CPNE8-206ENST00000549842 TXNRD3Q86VQ6 643 aa6.62□□□□□ -1.35
CPNE8-206ENST00000549842 MRPL18Q9H0U6 180 aaKnown RBP6.62□□□□□ -1.35
CPNE8-206ENST00000549842 LIN7BQ9HAP6 207 aa6.62□□□□□ -1.35
CPNE8-206ENST00000549842 SEC31BQ9NQW1 1179 aa6.62□□□□□ -1.35
CPNE8-206ENST00000549842 CD68P34810 354 aaPredicted RBP6.61□□□□□ -1.35
CPNE8-206ENST00000549842 SUZ12Q15022 739 aaKnown RBP6.61□□□□□ -1.35
CPNE8-206ENST00000549842 SHISA2Q6UWI4 295 aa6.61□□□□□ -1.35
CPNE8-206ENST00000549842 GALNT11Q8NCW6 608 aa6.61□□□□□ -1.35
CPNE8-206ENST00000549842 FBF1Q8TES7 1133 aa6.61□□□□□ -1.35
CPNE8-206ENST00000549842 METTL5Q9NRN9 209 aaKnown RBP6.61□□□□□ -1.35
CPNE8-206ENST00000549842 TRAK1Q9UPV9 953 aa6.61□□□□□ -1.35
CPNE8-206ENST00000549842 A0A096LPE4 126 aa6.6□□□□□ -1.35
CPNE8-206ENST00000549842 A0A1W2PPZ6 126 aa6.6□□□□□ -1.35
CPNE8-206ENST00000549842 ITPKAP23677 461 aa6.6□□□□□ -1.35
CPNE8-206ENST00000549842 ARL4DP49703 201 aa6.6□□□□□ -1.35
CPNE8-206ENST00000549842 LDLRAD1Q5T700 205 aa6.6□□□□□ -1.35
CPNE8-206ENST00000549842 WFDC12Q8WWY7 111 aa6.6□□□□□ -1.35
CPNE8-206ENST00000549842 FRMD6Q96NE9 622 aa6.6□□□□□ -1.35
CPNE8-206ENST00000549842 ZFYVE1Q9HBF4 777 aa6.6□□□□□ -1.35
CPNE8-206ENST00000549842 NPHS2Q9NP85 383 aa6.6□□□□□ -1.35
CPNE8-206ENST00000549842 VTI1BQ9UEU0 232 aa6.6□□□□□ -1.35
CPNE8-206ENST00000549842 WWC3Q9ULE0 1092 aa6.6□□□□□ -1.35
CPNE8-206ENST00000549842 PNMA6FA0A0J9YX94 578 aa6.59□□□□□ -1.35
CPNE8-206ENST00000549842 SOX1O00570 391 aaPredicted RBP6.59□□□□□ -1.35
CPNE8-206ENST00000549842 C19orf57Q0VDD7 668 aa6.59□□□□□ -1.35
CPNE8-206ENST00000549842 IKBKEQ14164 716 aa6.59□□□□□ -1.35
CPNE8-206ENST00000549842 RPS26P11Q5JNZ5 115 aaPredicted RBP6.59□□□□□ -1.35
CPNE8-206ENST00000549842 C9orf131Q5VYM1 1079 aa6.59□□□□□ -1.35
CPNE8-206ENST00000549842 Q6ZS46 218 aa6.59□□□□□ -1.35
CPNE8-206ENST00000549842 UBXN4Q92575 508 aa6.59□□□□□ -1.35
CPNE8-206ENST00000549842 RNF34Q969K3 372 aa6.59□□□□□ -1.35
CPNE8-206ENST00000549842 KLHDC7BQ96G42 594 aa6.59□□□□□ -1.35
CPNE8-206ENST00000549842 FAM161BQ96MY7 647 aa6.59□□□□□ -1.35
CPNE8-206ENST00000549842 SSBP4Q9BWG4 385 aaPredicted RBP6.59□□□□□ -1.35
CPNE8-206ENST00000549842 EHD4Q9H223 541 aa6.59□□□□□ -1.35
CPNE8-206ENST00000549842 USP21Q9UK80 565 aa6.59□□□□□ -1.35
CPNE8-206ENST00000549842 F8W735 103 aaPredicted RBP6.58□□□□□ -1.36
CPNE8-206ENST00000549842 GIPC1O14908 333 aa6.58□□□□□ -1.36
CPNE8-206ENST00000549842 HMGB1P09429 215 aaKnown RBP6.58□□□□□ -1.36
CPNE8-206ENST00000549842 ESRRAP11474 423 aaPredicted RBP6.58□□□□□ -1.36
CPNE8-206ENST00000549842 XRCC5P13010 732 aaKnown RBP6.58□□□□□ -1.36
CPNE8-206ENST00000549842 GRIA4P48058 902 aa6.58□□□□□ -1.36
CPNE8-206ENST00000549842 FOXD4L6Q3SYB3 417 aaPredicted RBP6.58□□□□□ -1.36
CPNE8-206ENST00000549842 FOXD4L3Q6VB84 417 aaPredicted RBP6.58□□□□□ -1.36
CPNE8-206ENST00000549842 NT5DC4Q86YG4 428 aa6.58□□□□□ -1.36
CPNE8-206ENST00000549842 ASAP3Q8TDY4 903 aa6.58□□□□□ -1.36
CPNE8-206ENST00000549842 CLEC4MQ9H2X3 399 aaPredicted RBP6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms