RNA–Protein interactions for RNA: ENST00000549537.6

TMEM116-208, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TMEM116, Length 1,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-208ENST00000549537 MRS2Q9HD23 443 aa8.61□□□□□ -1.03
TMEM116-208ENST00000549537 HYPKQ9NX55 129 aa8.61□□□□□ -1.03
TMEM116-208ENST00000549537 COL4A1P02462 1669 aa8.6□□□□□ -1.03
TMEM116-208ENST00000549537 ANP32CO43423 234 aa8.6□□□□□ -1.03
TMEM116-208ENST00000549537 OATP04181 439 aa8.6□□□□□ -1.03
TMEM116-208ENST00000549537 VEGFAP15692 232 aaPredicted RBP8.6□□□□□ -1.03
TMEM116-208ENST00000549537 HTRA3P83110 453 aa8.6□□□□□ -1.03
TMEM116-208ENST00000549537 FSTL1Q12841 308 aa8.6□□□□□ -1.03
TMEM116-208ENST00000549537 TSPYL6Q8N831 410 aa8.6□□□□□ -1.03
TMEM116-208ENST00000549537 RPGRQ92834 1020 aaKnown RBP8.6□□□□□ -1.03
TMEM116-208ENST00000549537 PSMD1Q99460 953 aa8.6□□□□□ -1.03
TMEM116-208ENST00000549537 ZNF277Q9NRM2 450 aaPredicted RBP8.6□□□□□ -1.03
TMEM116-208ENST00000549537 LRRC37AA6NMS7 1700 aa8.6□□□□□ -1.03
TMEM116-208ENST00000549537 ABCC4O15439 1325 aa8.59□□□□□ -1.03
TMEM116-208ENST00000549537 IL16Q14005 1332 aa8.59□□□□□ -1.03
TMEM116-208ENST00000549537 SH3TC1Q8TE82 1336 aa8.59□□□□□ -1.03
TMEM116-208ENST00000549537 ELL2O00472 640 aaPredicted RBP8.59□□□□□ -1.03
TMEM116-208ENST00000549537 GPR37O15354 613 aa8.59□□□□□ -1.03
TMEM116-208ENST00000549537 HCLS1P14317 486 aaPredicted RBP8.59□□□□□ -1.03
TMEM116-208ENST00000549537 TRIM28Q13263 835 aaKnown RBP8.59□□□□□ -1.03
TMEM116-208ENST00000549537 CC2D2BQ6DHV5 1058 aa8.59□□□□□ -1.03
TMEM116-208ENST00000549537 KRI1Q8N9T8 703 aaKnown RBP8.59□□□□□ -1.03
TMEM116-208ENST00000549537 TSR2Q969E8 191 aaKnown RBP8.59□□□□□ -1.03
TMEM116-208ENST00000549537 RBM17Q96I25 401 aaKnown RBP8.59□□□□□ -1.03
TMEM116-208ENST00000549537 NLRP3Q96P20 1036 aa8.59□□□□□ -1.03
TMEM116-208ENST00000549537 PHAXQ9H814 394 aaKnown RBP8.59□□□□□ -1.03
TMEM116-208ENST00000549537 TRMT112Q9UI30 125 aaKnown RBP8.59□□□□□ -1.03
TMEM116-208ENST00000549537 TAF1P21675 1872 aa8.59□□□□□ -1.03
TMEM116-208ENST00000549537 ZNF541Q9H0D2 1346 aa8.58□□□□□ -1.04
TMEM116-208ENST00000549537 DUOX1Q9NRD9 1551 aa8.58□□□□□ -1.04
TMEM116-208ENST00000549537 ATP5J2-PTCD1G3V325 749 aa8.58□□□□□ -1.04
TMEM116-208ENST00000549537 FZD9O00144 591 aa8.58□□□□□ -1.04
TMEM116-208ENST00000549537 TNFRSF10AO00220 468 aa8.58□□□□□ -1.04
TMEM116-208ENST00000549537 DDNO94850 711 aaPredicted RBP8.58□□□□□ -1.04
TMEM116-208ENST00000549537 IARSP41252 1262 aaKnown RBP8.58□□□□□ -1.04
TMEM116-208ENST00000549537 ATP6V0A2Q9Y487 856 aa8.58□□□□□ -1.04
TMEM116-208ENST00000549537 SCN4AP35499 1836 aa8.58□□□□□ -1.04
TMEM116-208ENST00000549537 ADAMTSL1Q8N6G6 1762 aa8.58□□□□□ -1.04
TMEM116-208ENST00000549537 LTBP1Q14766 1721 aa8.57□□□□□ -1.04
TMEM116-208ENST00000549537 GRIPAP1Q4V328 841 aa8.57□□□□□ -1.04
TMEM116-208ENST00000549537 CCDC30Q5VVM6 783 aa8.57□□□□□ -1.04
TMEM116-208ENST00000549537 SCUBE3Q8IX30 993 aa8.57□□□□□ -1.04
TMEM116-208ENST00000549537 C16orf71Q8IYS4 520 aaPredicted RBP8.57□□□□□ -1.04
TMEM116-208ENST00000549537 SMC1BQ8NDV3 1235 aa8.57□□□□□ -1.04
TMEM116-208ENST00000549537 ZNF428Q96B54 188 aa8.57□□□□□ -1.04
TMEM116-208ENST00000549537 FAM89AQ96GI7 184 aa8.57□□□□□ -1.04
TMEM116-208ENST00000549537 RTFDC1Q9BY42 306 aaPredicted RBP8.57□□□□□ -1.04
TMEM116-208ENST00000549537 C1orf115Q9H7X2 142 aa8.57□□□□□ -1.04
TMEM116-208ENST00000549537 FANCIQ9NVI1 1328 aa8.56□□□□□ -1.04
TMEM116-208ENST00000549537 BBOX1O75936 387 aa8.56□□□□□ -1.04
TMEM116-208ENST00000549537 SLC10A3P09131 477 aa8.56□□□□□ -1.04
TMEM116-208ENST00000549537 RPIAP49247 311 aa8.56□□□□□ -1.04
TMEM116-208ENST00000549537 GRAPQ13588 217 aa8.56□□□□□ -1.04
TMEM116-208ENST00000549537 SF3B3Q15393 1217 aaKnown RBP8.56□□□□□ -1.04
TMEM116-208ENST00000549537 TWISTNBQ3B726 338 aaPredicted RBP8.56□□□□□ -1.04
TMEM116-208ENST00000549537 WDR63Q8IWG1 891 aa8.56□□□□□ -1.04
TMEM116-208ENST00000549537 GRAPLQ8TC17 118 aaPredicted RBP8.56□□□□□ -1.04
TMEM116-208ENST00000549537 TCERG1O14776 1098 aaKnown RBP8.55□□□□□ -1.04
TMEM116-208ENST00000549537 CD2BP2O95400 341 aaKnown RBP8.55□□□□□ -1.04
TMEM116-208ENST00000549537 DDX46Q7L014 1031 aaKnown RBP8.55□□□□□ -1.04
TMEM116-208ENST00000549537 G2E3Q7L622 706 aa8.55□□□□□ -1.04
TMEM116-208ENST00000549537 RIC3Q7Z5B4 369 aa8.55□□□□□ -1.04
TMEM116-208ENST00000549537 SP8Q8IXZ3 490 aa8.55□□□□□ -1.04
TMEM116-208ENST00000549537 ZBTB38Q8NAP3 1195 aaPredicted RBP8.55□□□□□ -1.04
TMEM116-208ENST00000549537 CCDC191Q8NCU4 936 aa8.55□□□□□ -1.04
TMEM116-208ENST00000549537 SPSB2Q99619 263 aa8.55□□□□□ -1.04
TMEM116-208ENST00000549537 MYD88Q99836 296 aa8.55□□□□□ -1.04
TMEM116-208ENST00000549537 METTL22Q9BUU2 404 aaPredicted RBP8.55□□□□□ -1.04
TMEM116-208ENST00000549537 CHMP4AQ9BY43 222 aa8.55□□□□□ -1.04
TMEM116-208ENST00000549537 AAASQ9NRG9 546 aa8.55□□□□□ -1.04
TMEM116-208ENST00000549537 ZNF521Q96K83 1311 aa8.54□□□□□ -1.04
TMEM116-208ENST00000549537 IRS4O14654 1257 aaPredicted RBP8.54□□□□□ -1.04
TMEM116-208ENST00000549537 PCCAP05165 728 aaPredicted RBP8.54□□□□□ -1.04
TMEM116-208ENST00000549537 IGKV5-2P06315 115 aa8.54□□□□□ -1.04
TMEM116-208ENST00000549537 RTL5Q5HYW3 569 aaPredicted RBP8.54□□□□□ -1.04
TMEM116-208ENST00000549537 TREML4Q6UXN2 200 aa8.54□□□□□ -1.04
TMEM116-208ENST00000549537 KSR2Q6VAB6 950 aa8.54□□□□□ -1.04
TMEM116-208ENST00000549537 TNS4Q8IZW8 715 aa8.54□□□□□ -1.04
TMEM116-208ENST00000549537 GPC2Q8N158 579 aa8.54□□□□□ -1.04
TMEM116-208ENST00000549537 CRIPAKQ8N1N5 446 aa8.54□□□□□ -1.04
TMEM116-208ENST00000549537 CELF1Q92879 486 aaKnown RBP8.54□□□□□ -1.04
TMEM116-208ENST00000549537 VPS33BQ9H267 617 aa8.54□□□□□ -1.04
TMEM116-208ENST00000549537 TAF1DQ9H5J8 278 aaPredicted RBP8.54□□□□□ -1.04
TMEM116-208ENST00000549537 MAP3K2Q9Y2U5 619 aa8.54□□□□□ -1.04
TMEM116-208ENST00000549537 CACNA1FO60840 1977 aa8.53□□□□□ -1.04
TMEM116-208ENST00000549537 PI4KAP2A4QPH2 592 aa8.53□□□□□ -1.04
TMEM116-208ENST00000549537 IQCA1LA6NCM1 817 aa8.53□□□□□ -1.04
TMEM116-208ENST00000549537 VAMP4O75379 141 aa8.53□□□□□ -1.04
TMEM116-208ENST00000549537 DDX58O95786 925 aaKnown RBP8.53□□□□□ -1.04
TMEM116-208ENST00000549537 HIC1Q14526 733 aa8.53□□□□□ -1.04
TMEM116-208ENST00000549537 TMC4Q7Z404 712 aa8.53□□□□□ -1.04
TMEM116-208ENST00000549537 FAM9BQ8IZU0 186 aa8.53□□□□□ -1.04
TMEM116-208ENST00000549537 LARGE2Q8N3Y3 721 aa8.53□□□□□ -1.04
TMEM116-208ENST00000549537 PI4KAP1Q8N8J0 262 aa8.53□□□□□ -1.04
TMEM116-208ENST00000549537 PXYLP1Q8TE99 480 aa8.53□□□□□ -1.04
TMEM116-208ENST00000549537 JDP2Q8WYK2 163 aa8.53□□□□□ -1.04
TMEM116-208ENST00000549537 CWC25Q9NXE8 425 aaPredicted RBP8.53□□□□□ -1.04
TMEM116-208ENST00000549537 SALL2Q9Y467 1007 aaPredicted RBP8.53□□□□□ -1.04
TMEM116-208ENST00000549537 CDHR2Q9BYE9 1310 aa8.53□□□□□ -1.04
TMEM116-208ENST00000549537 PDE4DIPQ5VU43 2346 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms