RNA–Protein interactions for RNA: ENST00000548979.1

SLC38A1-205, Transcript of solute carrier family 38 member 1, humanhuman

TSL 4

Gene SLC38A1, Length 543 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-205ENST00000548979 ETNK1Q9HBU6 452 aa11.2□□□□□ -0.62
SLC38A1-205ENST00000548979 HRH3Q9Y5N1 445 aa11.2□□□□□ -0.62
SLC38A1-205ENST00000548979 ZBTB7AO95365 584 aa11.19□□□□□ -0.62
SLC38A1-205ENST00000548979 SCNN1DP51172 638 aa11.19□□□□□ -0.62
SLC38A1-205ENST00000548979 CC2D1BQ5T0F9 858 aaKnown RBP11.19□□□□□ -0.62
SLC38A1-205ENST00000548979 SULT6B1Q6IMI4 303 aa11.19□□□□□ -0.62
SLC38A1-205ENST00000548979 LYSMD3Q7Z3D4 306 aa11.19□□□□□ -0.62
SLC38A1-205ENST00000548979 NLRP3Q96P20 1036 aa11.19□□□□□ -0.62
SLC38A1-205ENST00000548979 PKD1L3Q7Z443 1732 aa11.18□□□□□ -0.62
SLC38A1-205ENST00000548979 DOT1LQ8TEK3 1739 aa11.18□□□□□ -0.62
SLC38A1-205ENST00000548979 SHANK3Q9BYB0 1731 aa11.18□□□□□ -0.62
SLC38A1-205ENST00000548979 PALLDQ8WX93 1383 aa11.18□□□□□ -0.62
SLC38A1-205ENST00000548979 SLC35F4A4IF30 521 aa11.18□□□□□ -0.62
SLC38A1-205ENST00000548979 USP17L5A8MUK1 530 aa11.18□□□□□ -0.62
SLC38A1-205ENST00000548979 DIAPH1O60610 1272 aaKnown RBP11.18□□□□□ -0.62
SLC38A1-205ENST00000548979 CCDC155Q8N6L0 562 aa11.18□□□□□ -0.62
SLC38A1-205ENST00000548979 NFATC2IPQ8NCF5 419 aa11.18□□□□□ -0.62
SLC38A1-205ENST00000548979 PIGBQ92521 554 aa11.18□□□□□ -0.62
SLC38A1-205ENST00000548979 XAGE2Q96GT9 111 aa11.18□□□□□ -0.62
SLC38A1-205ENST00000548979 ESYT1Q9BSJ8 1104 aa11.18□□□□□ -0.62
SLC38A1-205ENST00000548979 GRIP2Q9C0E4 1043 aa11.18□□□□□ -0.62
SLC38A1-205ENST00000548979 PCDHGA11Q9Y5H2 935 aa11.18□□□□□ -0.62
SLC38A1-205ENST00000548979 POLD1P28340 1107 aa11.17□□□□□ -0.62
SLC38A1-205ENST00000548979 CENPCQ03188 943 aa11.17□□□□□ -0.62
SLC38A1-205ENST00000548979 POU4F2Q12837 409 aa11.17□□□□□ -0.62
SLC38A1-205ENST00000548979 ZNF827Q17R98 1081 aa11.17□□□□□ -0.62
SLC38A1-205ENST00000548979 ZNF530Q6P9A1 599 aaPredicted RBP11.17□□□□□ -0.62
SLC38A1-205ENST00000548979 KDRP35968 1356 aa11.16□□□□□ -0.62
SLC38A1-205ENST00000548979 LOC102724428A0A0B4J2F2 783 aa11.16□□□□□ -0.62
SLC38A1-205ENST00000548979 GPC1P35052 558 aa11.16□□□□□ -0.62
SLC38A1-205ENST00000548979 SIK1P57059 783 aa11.16□□□□□ -0.62
SLC38A1-205ENST00000548979 CFAP53Q96M91 514 aa11.16□□□□□ -0.62
SLC38A1-205ENST00000548979 PDGFDQ9GZP0 370 aaPredicted RBP11.16□□□□□ -0.62
SLC38A1-205ENST00000548979 PAPPAQ13219 1627 aa11.16□□□□□ -0.62
SLC38A1-205ENST00000548979 CABP4P57796 275 aa11.15□□□□□ -0.62
SLC38A1-205ENST00000548979 EML3Q32P44 896 aa11.15□□□□□ -0.62
SLC38A1-205ENST00000548979 NPAS3Q8IXF0 933 aa11.15□□□□□ -0.62
SLC38A1-205ENST00000548979 ARXQ96QS3 562 aa11.15□□□□□ -0.62
SLC38A1-205ENST00000548979 FHDC1Q9C0D6 1143 aaPredicted RBP11.15□□□□□ -0.62
SLC38A1-205ENST00000548979 TFIP11Q9UBB9 837 aaKnown RBP11.15□□□□□ -0.62
SLC38A1-205ENST00000548979 CASZ1Q86V15 1759 aa11.15□□□□□ -0.62
SLC38A1-205ENST00000548979 LY75O60449 1722 aa11.15□□□□□ -0.63
SLC38A1-205ENST00000548979 PNPLA7Q6ZV29 1317 aa11.14□□□□□ -0.63
SLC38A1-205ENST00000548979 TMEM229AB2RXF0 380 aa11.14□□□□□ -0.63
SLC38A1-205ENST00000548979 ATP9BO43861 1147 aa11.14□□□□□ -0.63
SLC38A1-205ENST00000548979 GDF10P55107 478 aa11.14□□□□□ -0.63
SLC38A1-205ENST00000548979 KCNQ4P56696 695 aa11.14□□□□□ -0.63
SLC38A1-205ENST00000548979 AKAP4Q5JQC9 854 aa11.14□□□□□ -0.63
SLC38A1-205ENST00000548979 CALR3Q96L12 384 aaKnown RBP11.14□□□□□ -0.63
SLC38A1-205ENST00000548979 NUDCQ9Y266 331 aa11.14□□□□□ -0.63
SLC38A1-205ENST00000548979 USP17L3A6NCW0 530 aa11.13□□□□□ -0.63
SLC38A1-205ENST00000548979 USP17L4A6NCW7 530 aa11.13□□□□□ -0.63
SLC38A1-205ENST00000548979 GMPRP36959 345 aa11.13□□□□□ -0.63
SLC38A1-205ENST00000548979 USP17L2Q6R6M4 530 aa11.13□□□□□ -0.63
SLC38A1-205ENST00000548979 USP17L1Q7RTZ2 530 aa11.13□□□□□ -0.63
SLC38A1-205ENST00000548979 AEBP1Q8IUX7 1158 aa11.13□□□□□ -0.63
SLC38A1-205ENST00000548979 GPR161Q8N6U8 529 aaKnown RBP11.13□□□□□ -0.63
SLC38A1-205ENST00000548979 ATG3Q9NT62 314 aa11.13□□□□□ -0.63
SLC38A1-205ENST00000548979 CUEDC1Q9NWM3 386 aaPredicted RBP11.13□□□□□ -0.63
SLC38A1-205ENST00000548979 ASAP1Q9ULH1 1129 aa11.13□□□□□ -0.63
SLC38A1-205ENST00000548979 INHAP05111 366 aa11.12□□□□□ -0.63
SLC38A1-205ENST00000548979 SSFA2P28290 1259 aa11.12□□□□□ -0.63
SLC38A1-205ENST00000548979 GTF2IP78347 998 aa11.12□□□□□ -0.63
SLC38A1-205ENST00000548979 COL23A1Q86Y22 540 aaPredicted RBP11.12□□□□□ -0.63
SLC38A1-205ENST00000548979 KIAA1024Q9UPX6 916 aa11.12□□□□□ -0.63
SLC38A1-205ENST00000548979 NOD1Q9Y239 953 aa11.12□□□□□ -0.63
SLC38A1-205ENST00000548979 MAP3K5Q99683 1374 aa11.12□□□□□ -0.63
SLC38A1-205ENST00000548979 QSER1Q2KHR3 1735 aa11.12□□□□□ -0.63
SLC38A1-205ENST00000548979 HMOX1P09601 288 aa11.11□□□□□ -0.63
SLC38A1-205ENST00000548979 NBPF10Q6P3W6 841 aaKnown RBP11.11□□□□□ -0.63
SLC38A1-205ENST00000548979 NBPF15Q8N660 670 aa11.11□□□□□ -0.63
SLC38A1-205ENST00000548979 GAS2L2Q8NHY3 880 aa11.11□□□□□ -0.63
SLC38A1-205ENST00000548979 SYT17Q9BSW7 474 aa11.11□□□□□ -0.63
SLC38A1-205ENST00000548979 SERTAD1Q9UHV2 236 aa11.11□□□□□ -0.63
SLC38A1-205ENST00000548979 ITGB4P16144 1822 aa11.11□□□□□ -0.63
SLC38A1-205ENST00000548979 PALM3A6NDB9 673 aaPredicted RBP11.1□□□□□ -0.63
SLC38A1-205ENST00000548979 U2SURPO15042 1029 aaKnown RBP11.1□□□□□ -0.63
SLC38A1-205ENST00000548979 ZBTB7BO15156 539 aaPredicted RBP11.1□□□□□ -0.63
SLC38A1-205ENST00000548979 CLDN10P78369 228 aa11.1□□□□□ -0.63
SLC38A1-205ENST00000548979 CNGB1Q14028 1251 aaPredicted RBP11.1□□□□□ -0.63
SLC38A1-205ENST00000548979 PLEKHM2Q8IWE5 1019 aa11.1□□□□□ -0.63
SLC38A1-205ENST00000548979 IRF7Q92985 503 aa11.1□□□□□ -0.63
SLC38A1-205ENST00000548979 ZMYND15Q9H091 742 aa11.1□□□□□ -0.63
SLC38A1-205ENST00000548979 SPATA31C2B4DYI2 1134 aa11.09□□□□□ -0.63
SLC38A1-205ENST00000548979 ITGA6P23229 1130 aa11.09□□□□□ -0.63
SLC38A1-205ENST00000548979 PHKA2P46019 1235 aa11.09□□□□□ -0.63
SLC38A1-205ENST00000548979 ZSCAN10Q96SZ4 725 aaPredicted RBP11.09□□□□□ -0.63
SLC38A1-205ENST00000548979 PPP1R12CQ9BZL4 782 aa11.09□□□□□ -0.63
SLC38A1-205ENST00000548979 SLC52A2Q9HAB3 445 aa11.09□□□□□ -0.63
SLC38A1-205ENST00000548979 RTCBQ9Y3I0 505 aaKnown RBP11.09□□□□□ -0.63
SLC38A1-205ENST00000548979 MAFBQ9Y5Q3 323 aaPredicted RBP11.09□□□□□ -0.63
SLC38A1-205ENST00000548979 USP3Q9Y6I4 520 aa11.09□□□□□ -0.63
SLC38A1-205ENST00000548979 TOGARAM1Q9Y4F4 1720 aa11.09□□□□□ -0.63
SLC38A1-205ENST00000548979 RNMTO43148 476 aaKnown RBP11.08□□□□□ -0.64
SLC38A1-205ENST00000548979 LZTS3O60299 673 aaPredicted RBP11.08□□□□□ -0.64
SLC38A1-205ENST00000548979 VSIG8P0DPA2 414 aa11.08□□□□□ -0.64
SLC38A1-205ENST00000548979 PPP2R1AP30153 589 aa11.08□□□□□ -0.64
SLC38A1-205ENST00000548979 TLR1Q15399 786 aa11.08□□□□□ -0.64
SLC38A1-205ENST00000548979 MTHFSDQ2M296 383 aaKnown RBP11.08□□□□□ -0.64
SLC38A1-205ENST00000548979 TRAPPC3LQ5T215 181 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms