RNA–Protein interactions for RNA: ENST00000548877.1

CDX2-202, Transcript of caudal type homeobox 2, humanhuman

TSL 3

Gene CDX2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-202ENST00000548877 CERS5Q8N5B7 392 aa17.39■□□□□ 0.37
CDX2-202ENST00000548877 CLMNQ96JQ2 1002 aa17.39■□□□□ 0.37
CDX2-202ENST00000548877 FZD1Q9UP38 647 aa17.39■□□□□ 0.37
CDX2-202ENST00000548877 CASP7P55210 303 aa17.38■□□□□ 0.37
CDX2-202ENST00000548877 OTUD7BQ6GQQ9 843 aa17.38■□□□□ 0.37
CDX2-202ENST00000548877 APAF1O14727 1248 aa17.37■□□□□ 0.37
CDX2-202ENST00000548877 ITGA6P23229 1130 aa17.37■□□□□ 0.37
CDX2-202ENST00000548877 GJA5P36382 358 aa17.37■□□□□ 0.37
CDX2-202ENST00000548877 CRHR2Q13324 411 aa17.37■□□□□ 0.37
CDX2-202ENST00000548877 CWF19L2Q2TBE0 894 aaKnown RBP17.37■□□□□ 0.37
CDX2-202ENST00000548877 EFCC1Q9HA90 598 aa17.37■□□□□ 0.37
CDX2-202ENST00000548877 A0A1B0GUL6 1792 aa17.37■□□□□ 0.37
CDX2-202ENST00000548877 SPDYE2BA6NHP3 402 aa17.36■□□□□ 0.37
CDX2-202ENST00000548877 USP2O75604 605 aaPredicted RBP17.36■□□□□ 0.37
CDX2-202ENST00000548877 SPDYE6P0CI01 402 aa17.36■□□□□ 0.37
CDX2-202ENST00000548877 IL1R1P14778 569 aa17.36■□□□□ 0.37
CDX2-202ENST00000548877 IREB2P48200 963 aaKnown RBP17.36■□□□□ 0.37
CDX2-202ENST00000548877 FXR1P51114 621 aaKnown RBP eCLIP17.36■□□□□ 0.37
CDX2-202ENST00000548877 SP3Q02447 781 aa17.36■□□□□ 0.37
CDX2-202ENST00000548877 CHRNDQ07001 517 aa17.36■□□□□ 0.37
CDX2-202ENST00000548877 UBE3BQ7Z3V4 1068 aa17.36■□□□□ 0.37
CDX2-202ENST00000548877 TSPYL6Q8N831 410 aa17.36■□□□□ 0.37
CDX2-202ENST00000548877 CD99L2Q8TCZ2 262 aa17.36■□□□□ 0.37
CDX2-202ENST00000548877 MPHOSPH8Q99549 860 aa17.36■□□□□ 0.37
CDX2-202ENST00000548877 PTPN18Q99952 460 aa17.36■□□□□ 0.37
CDX2-202ENST00000548877 EN2P19622 333 aaPredicted RBP17.35■□□□□ 0.37
CDX2-202ENST00000548877 CAP1Q01518 475 aa17.35■□□□□ 0.37
CDX2-202ENST00000548877 GCKRQ14397 625 aa17.35■□□□□ 0.37
CDX2-202ENST00000548877 ANKRD13AQ8IZ07 590 aa17.35■□□□□ 0.37
CDX2-202ENST00000548877 PRMT6Q96LA8 375 aaPredicted RBP17.35■□□□□ 0.37
CDX2-202ENST00000548877 ZNF316A6NFI3 1004 aaPredicted RBP17.34■□□□□ 0.37
CDX2-202ENST00000548877 MYO1BO43795 1136 aa17.34■□□□□ 0.37
CDX2-202ENST00000548877 CACNA1FO60840 1977 aa17.34■□□□□ 0.37
CDX2-202ENST00000548877 CFAP100Q494V2 611 aa17.34■□□□□ 0.37
CDX2-202ENST00000548877 NBPF12Q5TAG4 269 aaPredicted RBP17.34■□□□□ 0.37
CDX2-202ENST00000548877 ZNF333Q96JL9 665 aa17.34■□□□□ 0.37
CDX2-202ENST00000548877 MS4A4AQ96JQ5 239 aa17.34■□□□□ 0.37
CDX2-202ENST00000548877 OTOFQ9HC10 1997 aa17.34■□□□□ 0.37
CDX2-202ENST00000548877 PCDHAC2Q9Y5I4 1007 aa17.34■□□□□ 0.37
CDX2-202ENST00000548877 KCNJ4P48050 445 aa17.33■□□□□ 0.36
CDX2-202ENST00000548877 STK31Q9BXU1 1019 aa17.33■□□□□ 0.36
CDX2-202ENST00000548877 RASA3Q14644 834 aa17.32■□□□□ 0.36
CDX2-202ENST00000548877 AOX1Q06278 1338 aa17.31■□□□□ 0.36
CDX2-202ENST00000548877 CLRN2A0PK11 232 aa17.31■□□□□ 0.36
CDX2-202ENST00000548877 ARHGEF6Q15052 776 aa17.31■□□□□ 0.36
CDX2-202ENST00000548877 G2E3Q7L622 706 aa17.31■□□□□ 0.36
CDX2-202ENST00000548877 TMEM106CQ9BVX2 250 aa17.31■□□□□ 0.36
CDX2-202ENST00000548877 MYH16Q9H6N6 1097 aa17.31■□□□□ 0.36
CDX2-202ENST00000548877 FAM205AQ6ZU69 1335 aa17.3■□□□□ 0.36
CDX2-202ENST00000548877 ANKRD18BA2A2Z9 1011 aa17.3■□□□□ 0.36
CDX2-202ENST00000548877 SNAP23O00161 211 aa17.3■□□□□ 0.36
CDX2-202ENST00000548877 DDX10Q13206 875 aaKnown RBP17.3■□□□□ 0.36
CDX2-202ENST00000548877 ZNF804AQ7Z570 1209 aa17.3■□□□□ 0.36
CDX2-202ENST00000548877 LINS1Q8NG48 757 aa17.3■□□□□ 0.36
CDX2-202ENST00000548877 OPTNQ96CV9 577 aa17.3■□□□□ 0.36
CDX2-202ENST00000548877 SLC4A2P04920 1241 aa17.29■□□□□ 0.36
CDX2-202ENST00000548877 TNFAIP1Q13829 316 aa17.29■□□□□ 0.36
CDX2-202ENST00000548877 SPDYE2Q495Y8 402 aa17.29■□□□□ 0.36
CDX2-202ENST00000548877 NBPF11Q86T75 865 aa17.29■□□□□ 0.36
CDX2-202ENST00000548877 TEPSINQ96N21 525 aa17.29■□□□□ 0.36
CDX2-202ENST00000548877 VEZTQ9HBM0 779 aa17.29■□□□□ 0.36
CDX2-202ENST00000548877 F8W031 263 aaPredicted RBP17.28■□□□□ 0.36
CDX2-202ENST00000548877 TAF5LO75529 589 aa17.28■□□□□ 0.36
CDX2-202ENST00000548877 FOXO4P98177 505 aa17.28■□□□□ 0.36
CDX2-202ENST00000548877 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.28■□□□□ 0.36
CDX2-202ENST00000548877 BRI3BPQ8WY22 251 aa17.28■□□□□ 0.36
CDX2-202ENST00000548877 COLQQ9Y215 455 aaPredicted RBP17.28■□□□□ 0.36
CDX2-202ENST00000548877 ARAP2Q8WZ64 1704 aa17.27■□□□□ 0.36
CDX2-202ENST00000548877 CEP290O15078 2479 aa17.27■□□□□ 0.36
CDX2-202ENST00000548877 GTF2A2P52657 109 aa17.27■□□□□ 0.36
CDX2-202ENST00000548877 FLIIQ13045 1269 aa17.27■□□□□ 0.36
CDX2-202ENST00000548877 CCDC27Q2M243 656 aa17.27■□□□□ 0.36
CDX2-202ENST00000548877 TWISTNBQ3B726 338 aaPredicted RBP17.27■□□□□ 0.36
CDX2-202ENST00000548877 SLC9C1Q4G0N8 1177 aa17.27■□□□□ 0.36
CDX2-202ENST00000548877 HELBQ8NG08 1087 aaPredicted RBP17.27■□□□□ 0.36
CDX2-202ENST00000548877 DNAAF4Q8WXU2 420 aa17.27■□□□□ 0.36
CDX2-202ENST00000548877 PRKRIP1Q9H875 184 aaPredicted RBP17.27■□□□□ 0.36
CDX2-202ENST00000548877 ELP3Q9H9T3 547 aa17.27■□□□□ 0.36
CDX2-202ENST00000548877 ZFYVE28Q9HCC9 887 aa17.27■□□□□ 0.36
CDX2-202ENST00000548877 ZCCHC17Q9NP64 241 aaKnown RBP17.27■□□□□ 0.36
CDX2-202ENST00000548877 ZNF70Q9UC06 446 aaPredicted RBP17.27■□□□□ 0.36
CDX2-202ENST00000548877 SERPINA10Q9UK55 444 aa17.27■□□□□ 0.36
CDX2-202ENST00000548877 PTCH2Q9Y6C5 1203 aa17.27■□□□□ 0.36
CDX2-202ENST00000548877 IFIT5Q13325 482 aaKnown RBP17.26■□□□□ 0.35
CDX2-202ENST00000548877 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.26■□□□□ 0.35
CDX2-202ENST00000548877 TDRD7Q8NHU6 1098 aaKnown RBP17.26■□□□□ 0.35
CDX2-202ENST00000548877 TSR2Q969E8 191 aaKnown RBP17.26■□□□□ 0.35
CDX2-202ENST00000548877 OTUD5Q96G74 571 aa17.26■□□□□ 0.35
CDX2-202ENST00000548877 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.26■□□□□ 0.35
CDX2-202ENST00000548877 MAP3K9P80192 1104 aa17.25■□□□□ 0.35
CDX2-202ENST00000548877 TAF1CQ15572 869 aaPredicted RBP17.25■□□□□ 0.35
CDX2-202ENST00000548877 TRIOBPQ9H2D6 2365 aa17.25■□□□□ 0.35
CDX2-202ENST00000548877 CCL15-CCL14A0A0B4J2E2 113 aa17.24■□□□□ 0.35
CDX2-202ENST00000548877 GNRH1P01148 92 aa17.24■□□□□ 0.35
CDX2-202ENST00000548877 RBM5P52756 815 aaKnown RBP eCLIP17.24■□□□□ 0.35
CDX2-202ENST00000548877 VGLL4Q14135 290 aa17.24■□□□□ 0.35
CDX2-202ENST00000548877 CCL15Q16663 113 aa17.24■□□□□ 0.35
CDX2-202ENST00000548877 FAM43AQ8N2R8 423 aa17.24■□□□□ 0.35
CDX2-202ENST00000548877 IL16Q14005 1332 aa17.23■□□□□ 0.35
CDX2-202ENST00000548877 TLR2O60603 784 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms