RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 TXNDC2Q86VQ3 553 aa8.23□□□□□ -1.09
CCDC38-206ENST00000548771 ARMC10Q8N2F6 343 aa8.23□□□□□ -1.09
CCDC38-206ENST00000548771 TTC16Q8NEE8 873 aa8.23□□□□□ -1.09
CCDC38-206ENST00000548771 SEC31BQ9NQW1 1179 aa8.23□□□□□ -1.09
CCDC38-206ENST00000548771 SERPINB4P48594 390 aa8.22□□□□□ -1.09
CCDC38-206ENST00000548771 AAMPQ13685 434 aa8.22□□□□□ -1.09
CCDC38-206ENST00000548771 HGSNATQ68CP4 663 aa8.22□□□□□ -1.09
CCDC38-206ENST00000548771 VN1R5Q7Z5H4 357 aa8.22□□□□□ -1.09
CCDC38-206ENST00000548771 FAM46AQ96IP4 442 aaKnown RBP8.22□□□□□ -1.09
CCDC38-206ENST00000548771 BHLHE41Q9C0J9 482 aaPredicted RBP8.22□□□□□ -1.09
CCDC38-206ENST00000548771 SOX1O00570 391 aaPredicted RBP8.21□□□□□ -1.1
CCDC38-206ENST00000548771 EDN3P14138 238 aa8.21□□□□□ -1.1
CCDC38-206ENST00000548771 B4GALNT3Q6L9W6 998 aa8.21□□□□□ -1.1
CCDC38-206ENST00000548771 ERICH6Q7L0X2 663 aa8.21□□□□□ -1.1
CCDC38-206ENST00000548771 BSNDQ8WZ55 320 aa8.21□□□□□ -1.1
CCDC38-206ENST00000548771 IGHA2P01877 340 aa8.2□□□□□ -1.1
CCDC38-206ENST00000548771 GLB1P16278 677 aa8.2□□□□□ -1.1
CCDC38-206ENST00000548771 YBX3P16989 372 aaKnown RBP eCLIP8.2□□□□□ -1.1
CCDC38-206ENST00000548771 GP2P55259 537 aaKnown RBP8.2□□□□□ -1.1
CCDC38-206ENST00000548771 DUOXA2Q1HG44 320 aa8.2□□□□□ -1.1
CCDC38-206ENST00000548771 LCE1DQ5T752 114 aa8.2□□□□□ -1.1
CCDC38-206ENST00000548771 ACAD11Q709F0 780 aa8.2□□□□□ -1.1
CCDC38-206ENST00000548771 UBASH3BQ8TF42 649 aa8.2□□□□□ -1.1
CCDC38-206ENST00000548771 KRTAP4-7Q9BYR0 210 aa8.2□□□□□ -1.1
CCDC38-206ENST00000548771 LATS2Q9NRM7 1088 aa8.2□□□□□ -1.1
CCDC38-206ENST00000548771 AMOTL2Q9Y2J4 779 aa8.2□□□□□ -1.1
CCDC38-206ENST00000548771 CABP4P57796 275 aa8.19□□□□□ -1.1
CCDC38-206ENST00000548771 UVSSAQ2YD98 709 aa8.19□□□□□ -1.1
CCDC38-206ENST00000548771 CEP41Q9BYV8 373 aa8.19□□□□□ -1.1
CCDC38-206ENST00000548771 RAXQ9Y2V3 346 aa8.19□□□□□ -1.1
CCDC38-206ENST00000548771 MEGF11A6BM72 1044 aa8.18□□□□□ -1.1
CCDC38-206ENST00000548771 GALNT12Q8IXK2 581 aa8.18□□□□□ -1.1
CCDC38-206ENST00000548771 RETREG2Q8NC44 543 aa8.18□□□□□ -1.1
CCDC38-206ENST00000548771 FAM129BQ96TA1 746 aa8.18□□□□□ -1.1
CCDC38-206ENST00000548771 SOX17Q9H6I2 414 aaPredicted RBP8.18□□□□□ -1.1
CCDC38-206ENST00000548771 RNF114Q9Y508 228 aa8.18□□□□□ -1.1
CCDC38-206ENST00000548771 KIAA1324LA8MWY0 1029 aaPredicted RBP8.17□□□□□ -1.1
CCDC38-206ENST00000548771 SUPT5HO00267 1087 aaKnown RBP8.17□□□□□ -1.1
CCDC38-206ENST00000548771 IGLV1-40P01703 118 aa8.17□□□□□ -1.1
CCDC38-206ENST00000548771 C19orf57Q0VDD7 668 aa8.17□□□□□ -1.1
CCDC38-206ENST00000548771 FAM177BA6PVY3 158 aa8.16□□□□□ -1.1
CCDC38-206ENST00000548771 H3BRB1 525 aa8.16□□□□□ -1.1
CCDC38-206ENST00000548771 ESRRAP11474 423 aaPredicted RBP8.16□□□□□ -1.1
CCDC38-206ENST00000548771 TCF12Q99081 682 aa8.16□□□□□ -1.1
CCDC38-206ENST00000548771 TUT1Q9H6E5 874 aaKnown RBP8.16□□□□□ -1.1
CCDC38-206ENST00000548771 A0A1W2PP55 124 aa8.15□□□□□ -1.1
CCDC38-206ENST00000548771 CCNJLQ8IV13 435 aa8.15□□□□□ -1.1
CCDC38-206ENST00000548771 GLYCTKQ8IVS8 523 aa8.15□□□□□ -1.1
CCDC38-206ENST00000548771 SLC7A3Q8WY07 619 aa8.15□□□□□ -1.1
CCDC38-206ENST00000548771 MYRFLQ96LU7 910 aa8.15□□□□□ -1.1
CCDC38-206ENST00000548771 CITED4Q96RK1 184 aa8.15□□□□□ -1.1
CCDC38-206ENST00000548771 NRSN2Q9GZP1 204 aa8.15□□□□□ -1.1
CCDC38-206ENST00000548771 RNF208Q9H0X6 261 aa8.15□□□□□ -1.1
CCDC38-206ENST00000548771 METTL12A8MUP2 240 aa8.14□□□□□ -1.11
CCDC38-206ENST00000548771 DHX15O43143 795 aaKnown RBP8.14□□□□□ -1.11
CCDC38-206ENST00000548771 POLR3DP05423 398 aaPredicted RBP8.14□□□□□ -1.11
CCDC38-206ENST00000548771 NLRP12P59046 1061 aa8.14□□□□□ -1.11
CCDC38-206ENST00000548771 IKBKEQ14164 716 aa8.14□□□□□ -1.11
CCDC38-206ENST00000548771 USPL1Q5W0Q7 1092 aa8.14□□□□□ -1.11
CCDC38-206ENST00000548771 ZDHHC13Q8IUH4 622 aa8.14□□□□□ -1.11
CCDC38-206ENST00000548771 ARID3AQ99856 593 aa8.14□□□□□ -1.11
CCDC38-206ENST00000548771 TMPRSS13Q9BYE2 586 aa8.14□□□□□ -1.11
CCDC38-206ENST00000548771 STOML1Q9UBI4 398 aa8.14□□□□□ -1.11
CCDC38-206ENST00000548771 BRPF3Q9ULD4 1205 aa8.14□□□□□ -1.11
CCDC38-206ENST00000548771 DLGAP3O95886 979 aa8.13□□□□□ -1.11
CCDC38-206ENST00000548771 PREPP48147 710 aa8.13□□□□□ -1.11
CCDC38-206ENST00000548771 ARL4DP49703 201 aa8.13□□□□□ -1.11
CCDC38-206ENST00000548771 ANKRD34AQ69YU3 496 aa8.13□□□□□ -1.11
CCDC38-206ENST00000548771 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.13□□□□□ -1.11
CCDC38-206ENST00000548771 A0A096LPE4 126 aa8.12□□□□□ -1.11
CCDC38-206ENST00000548771 LOC100289279A0A1B0GTE1 492 aa8.12□□□□□ -1.11
CCDC38-206ENST00000548771 A0A1W2PPZ6 126 aa8.12□□□□□ -1.11
CCDC38-206ENST00000548771 GSC2O15499 205 aa8.12□□□□□ -1.11
CCDC38-206ENST00000548771 GRIA4P48058 902 aa8.12□□□□□ -1.11
CCDC38-206ENST00000548771 FZD5Q13467 585 aa8.12□□□□□ -1.11
CCDC38-206ENST00000548771 KIAA0319Q5VV43 1072 aa8.12□□□□□ -1.11
CCDC38-206ENST00000548771 FAM20CQ8IXL6 584 aa8.12□□□□□ -1.11
CCDC38-206ENST00000548771 ASAP3Q8TDY4 903 aa8.12□□□□□ -1.11
CCDC38-206ENST00000548771 UTP4Q969X6 686 aaKnown RBP8.12□□□□□ -1.11
CCDC38-206ENST00000548771 RUSC1Q9BVN2 902 aa8.12□□□□□ -1.11
CCDC38-206ENST00000548771 SUGCTQ9HAC7 445 aa8.12□□□□□ -1.11
CCDC38-206ENST00000548771 TIMELESSQ9UNS1 1208 aa8.12□□□□□ -1.11
CCDC38-206ENST00000548771 TIAF1O95411 115 aa8.11□□□□□ -1.11
CCDC38-206ENST00000548771 SPINK2P20155 84 aa8.11□□□□□ -1.11
CCDC38-206ENST00000548771 PDE4CQ08493 712 aa8.11□□□□□ -1.11
CCDC38-206ENST00000548771 ZNF423Q2M1K9 1284 aa8.11□□□□□ -1.11
CCDC38-206ENST00000548771 CLEC10AQ8IUN9 316 aa8.11□□□□□ -1.11
CCDC38-206ENST00000548771 TRIM42Q8IWZ5 723 aa8.11□□□□□ -1.11
CCDC38-206ENST00000548771 SMG8Q8ND04 991 aaKnown RBP8.11□□□□□ -1.11
CCDC38-206ENST00000548771 FAM83CQ9BQN1 747 aa8.11□□□□□ -1.11
CCDC38-206ENST00000548771 C7orf69Q9H7B7 122 aa8.11□□□□□ -1.11
CCDC38-206ENST00000548771 GPR182O15218 404 aa8.1□□□□□ -1.11
CCDC38-206ENST00000548771 NDUFB5O43674 189 aa8.1□□□□□ -1.11
CCDC38-206ENST00000548771 NEFLP07196 543 aa8.1□□□□□ -1.11
CCDC38-206ENST00000548771 PDE3BQ13370 1112 aa8.1□□□□□ -1.11
CCDC38-206ENST00000548771 ORC1Q13415 861 aa8.1□□□□□ -1.11
CCDC38-206ENST00000548771 SPRED3Q2MJR0 410 aa8.1□□□□□ -1.11
CCDC38-206ENST00000548771 HMX2A2RU54 273 aa8.09□□□□□ -1.11
CCDC38-206ENST00000548771 PRR19A6NJB7 356 aa8.09□□□□□ -1.11
CCDC38-206ENST00000548771 NFIAQ12857 509 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms