RNA–Protein interactions for RNA: ENST00000547861.5

CCDC65-203, Transcript of coiled-coil domain containing 65, humanhuman

TSL 2

Gene CCDC65, Length 1,746 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-203ENST00000547861 NMIQ13287 307 aaPredicted RBP9.76□□□□□ -0.85
CCDC65-203ENST00000547861 FSD1Q9BTV5 496 aa9.76□□□□□ -0.85
CCDC65-203ENST00000547861 GPR108Q9NPR9 543 aa9.76□□□□□ -0.85
CCDC65-203ENST00000547861 CCDC171Q6TFL3 1326 aa9.75□□□□□ -0.85
CCDC65-203ENST00000547861 SBF1O95248 1867 aa9.75□□□□□ -0.85
CCDC65-203ENST00000547861 COL4A1P02462 1669 aa9.75□□□□□ -0.85
CCDC65-203ENST00000547861 A0A0D9SFI3 127 aa9.75□□□□□ -0.85
CCDC65-203ENST00000547861 FAM205CA6NFA0 338 aa9.75□□□□□ -0.85
CCDC65-203ENST00000547861 BICDL1Q6ZP65 573 aa9.75□□□□□ -0.85
CCDC65-203ENST00000547861 SYNE4Q8N205 404 aa9.75□□□□□ -0.85
CCDC65-203ENST00000547861 EDC3Q96F86 508 aaKnown RBP9.75□□□□□ -0.85
CCDC65-203ENST00000547861 FAM227BQ96M60 508 aa9.75□□□□□ -0.85
CCDC65-203ENST00000547861 PUS3Q9BZE2 481 aaKnown RBP9.75□□□□□ -0.85
CCDC65-203ENST00000547861 SNRKQ9NRH2 765 aa9.75□□□□□ -0.85
CCDC65-203ENST00000547861 TBC1D2BQ9UPU7 963 aa9.75□□□□□ -0.85
CCDC65-203ENST00000547861 BOLA1Q9Y3E2 137 aa9.75□□□□□ -0.85
CCDC65-203ENST00000547861 MYH15Q9Y2K3 1946 aa9.75□□□□□ -0.85
CCDC65-203ENST00000547861 CSF1RP07333 972 aa9.74□□□□□ -0.85
CCDC65-203ENST00000547861 DEKP35659 375 aaKnown RBP9.74□□□□□ -0.85
CCDC65-203ENST00000547861 APLP1P51693 650 aa9.74□□□□□ -0.85
CCDC65-203ENST00000547861 NEK4P51957 841 aa9.74□□□□□ -0.85
CCDC65-203ENST00000547861 CTSWP56202 376 aa9.74□□□□□ -0.85
CCDC65-203ENST00000547861 PTH1RQ03431 593 aa9.74□□□□□ -0.85
CCDC65-203ENST00000547861 RAB3GAP1Q15042 981 aa9.74□□□□□ -0.85
CCDC65-203ENST00000547861 CCDC57Q2TAC2 916 aa9.74□□□□□ -0.85
CCDC65-203ENST00000547861 KIAA1211Q6ZU35 1233 aa9.74□□□□□ -0.85
CCDC65-203ENST00000547861 IFNLR1Q8IU57 520 aaPredicted RBP9.74□□□□□ -0.85
CCDC65-203ENST00000547861 SNX14Q9Y5W7 946 aa9.74□□□□□ -0.85
CCDC65-203ENST00000547861 NRXN2Q9P2S2 1712 aa9.74□□□□□ -0.85
CCDC65-203ENST00000547861 HOXB3P14651 431 aaPredicted RBP9.73□□□□□ -0.85
CCDC65-203ENST00000547861 RASSF7Q02833 373 aa9.73□□□□□ -0.85
CCDC65-203ENST00000547861 ZNF34Q8IZ26 560 aa9.73□□□□□ -0.85
CCDC65-203ENST00000547861 PKNOX2Q96KN3 472 aa9.73□□□□□ -0.85
CCDC65-203ENST00000547861 CCDC85AQ96PX6 553 aaPredicted RBP9.73□□□□□ -0.85
CCDC65-203ENST00000547861 DNAJC2Q99543 621 aaKnown RBP9.73□□□□□ -0.85
CCDC65-203ENST00000547861 HAUS7Q99871 368 aa9.73□□□□□ -0.85
CCDC65-203ENST00000547861 NDUFB9Q9Y6M9 179 aa9.73□□□□□ -0.85
CCDC65-203ENST00000547861 A0A1B0GUL7 405 aa9.73□□□□□ -0.85
CCDC65-203ENST00000547861 G3V3G9 751 aa9.73□□□□□ -0.85
CCDC65-203ENST00000547861 IRS4O14654 1257 aaPredicted RBP9.73□□□□□ -0.85
CCDC65-203ENST00000547861 CAMTA2O94983 1202 aa9.73□□□□□ -0.85
CCDC65-203ENST00000547861 MCM4P33991 863 aa9.73□□□□□ -0.85
CCDC65-203ENST00000547861 MCM2P49736 904 aa9.73□□□□□ -0.85
CCDC65-203ENST00000547861 C2CD5Q86YS7 1000 aa9.73□□□□□ -0.85
CCDC65-203ENST00000547861 TTLL6Q8N841 843 aa9.73□□□□□ -0.85
CCDC65-203ENST00000547861 UPF3BQ9BZI7 483 aaKnown RBP9.73□□□□□ -0.85
CCDC65-203ENST00000547861 RRAGCQ9HB90 399 aa9.73□□□□□ -0.85
CCDC65-203ENST00000547861 CARMIL3Q8ND23 1372 aa9.73□□□□□ -0.85
CCDC65-203ENST00000547861 TNRC6CQ9HCJ0 1690 aaKnown RBP9.72□□□□□ -0.85
CCDC65-203ENST00000547861 H0YIN7 160 aa9.72□□□□□ -0.85
CCDC65-203ENST00000547861 IFIT5Q13325 482 aaKnown RBP9.72□□□□□ -0.85
CCDC65-203ENST00000547861 TAF7LQ5H9L4 462 aa9.72□□□□□ -0.85
CCDC65-203ENST00000547861 IFFO2Q5TF58 517 aa9.72□□□□□ -0.85
CCDC65-203ENST00000547861 TBC1D9BQ66K14 1250 aa9.72□□□□□ -0.85
CCDC65-203ENST00000547861 TTLL11Q8NHH1 800 aa9.72□□□□□ -0.85
CCDC65-203ENST00000547861 RBM46Q8TBY0 533 aaKnown RBP9.72□□□□□ -0.85
CCDC65-203ENST00000547861 KCNB2Q92953 911 aa9.72□□□□□ -0.85
CCDC65-203ENST00000547861 TNPO1Q92973 898 aaKnown RBP9.72□□□□□ -0.85
CCDC65-203ENST00000547861 NEUROD6Q96NK8 337 aa9.72□□□□□ -0.85
CCDC65-203ENST00000547861 GREM2Q9H772 168 aa9.72□□□□□ -0.85
CCDC65-203ENST00000547861 TRMT112Q9UI30 125 aaKnown RBP9.72□□□□□ -0.85
CCDC65-203ENST00000547861 ABCC12Q96J65 1359 aa9.72□□□□□ -0.85
CCDC65-203ENST00000547861 DLEC1Q9Y238 1755 aa9.72□□□□□ -0.85
CCDC65-203ENST00000547861 PCNTO95613 3336 aa9.71□□□□□ -0.85
CCDC65-203ENST00000547861 PDE8AO60658 829 aa9.71□□□□□ -0.85
CCDC65-203ENST00000547861 ITGA6P23229 1130 aa9.71□□□□□ -0.85
CCDC65-203ENST00000547861 PRELPP51888 382 aa9.71□□□□□ -0.85
CCDC65-203ENST00000547861 PRPF40BQ6NWY9 871 aaKnown RBP9.71□□□□□ -0.85
CCDC65-203ENST00000547861 DDX46Q7L014 1031 aaKnown RBP9.71□□□□□ -0.85
CCDC65-203ENST00000547861 ZNF589Q86UQ0 364 aaPredicted RBP9.71□□□□□ -0.85
CCDC65-203ENST00000547861 CCDC24Q8N4L8 307 aa9.71□□□□□ -0.85
CCDC65-203ENST00000547861 ZGPATQ8N5A5 531 aaKnown RBP9.71□□□□□ -0.85
CCDC65-203ENST00000547861 TMX3Q96JJ7 454 aa9.71□□□□□ -0.85
CCDC65-203ENST00000547861 CEP126Q9P2H0 1117 aa9.71□□□□□ -0.85
CCDC65-203ENST00000547861 RBM8AQ9Y5S9 174 aaKnown RBP9.71□□□□□ -0.85
CCDC65-203ENST00000547861 RPAP1Q9BWH6 1393 aaPredicted RBP9.71□□□□□ -0.85
CCDC65-203ENST00000547861 CCDC88AQ3V6T2 1871 aa9.71□□□□□ -0.85
CCDC65-203ENST00000547861 SH3TC1Q8TE82 1336 aa9.71□□□□□ -0.86
CCDC65-203ENST00000547861 ANKRD18BA2A2Z9 1011 aa9.7□□□□□ -0.86
CCDC65-203ENST00000547861 LMNB1P20700 586 aa9.7□□□□□ -0.86
CCDC65-203ENST00000547861 ADORA1P30542 326 aa9.7□□□□□ -0.86
CCDC65-203ENST00000547861 TIMM10P62072 90 aa9.7□□□□□ -0.86
CCDC65-203ENST00000547861 CUL4AQ13619 759 aa9.7□□□□□ -0.86
CCDC65-203ENST00000547861 NOL8Q76FK4 1167 aaKnown RBP9.7□□□□□ -0.86
CCDC65-203ENST00000547861 DNAJC5GQ8N7S2 189 aa9.7□□□□□ -0.86
CCDC65-203ENST00000547861 KBTBD3Q8NAB2 608 aa9.7□□□□□ -0.86
CCDC65-203ENST00000547861 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.7□□□□□ -0.86
CCDC65-203ENST00000547861 TTC14Q96N46 770 aa9.7□□□□□ -0.86
CCDC65-203ENST00000547861 PAG1Q9NWQ8 432 aa9.7□□□□□ -0.86
CCDC65-203ENST00000547861 ECM29Q5VYK3 1845 aa9.7□□□□□ -0.86
CCDC65-203ENST00000547861 NTSR2O95665 410 aa9.7□□□□□ -0.86
CCDC65-203ENST00000547861 CYP2E1P05181 493 aaPredicted RBP9.7□□□□□ -0.86
CCDC65-203ENST00000547861 HTRA3P83110 453 aa9.7□□□□□ -0.86
CCDC65-203ENST00000547861 NECTIN1Q15223 517 aa9.7□□□□□ -0.86
CCDC65-203ENST00000547861 SUSD4Q5VX71 490 aa9.7□□□□□ -0.86
CCDC65-203ENST00000547861 CREB3L3Q68CJ9 461 aa9.7□□□□□ -0.86
CCDC65-203ENST00000547861 PRR5LQ6MZQ0 368 aa9.7□□□□□ -0.86
CCDC65-203ENST00000547861 IL27Q8NEV9 243 aa9.7□□□□□ -0.86
CCDC65-203ENST00000547861 MAP4K1Q92918 833 aa9.7□□□□□ -0.86
CCDC65-203ENST00000547861 ZNF622Q969S3 477 aaKnown RBP eCLIP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms