RNA–Protein interactions for RNA: ENST00000547591.5

RAB3IP-210, Transcript of RAB3A interacting protein, humanhuman

TSL 5

Gene RAB3IP, Length 695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-210ENST00000547591 SOX17Q9H6I2 414 aaPredicted RBP8.09□□□□□ -1.11
RAB3IP-210ENST00000547591 NPHS2Q9NP85 383 aa8.09□□□□□ -1.11
RAB3IP-210ENST00000547591 H2AFB1P0C5Y9 115 aa8.08□□□□□ -1.12
RAB3IP-210ENST00000547591 H2AFB2P0C5Z0 115 aa8.08□□□□□ -1.12
RAB3IP-210ENST00000547591 DUOXA2Q1HG44 320 aa8.08□□□□□ -1.12
RAB3IP-210ENST00000547591 NKAPLQ5M9Q1 402 aa8.08□□□□□ -1.12
RAB3IP-210ENST00000547591 Q6ZS46 218 aa8.08□□□□□ -1.12
RAB3IP-210ENST00000547591 VN1R5Q7Z5H4 357 aa8.08□□□□□ -1.12
RAB3IP-210ENST00000547591 SLC7A3Q8WY07 619 aa8.08□□□□□ -1.12
RAB3IP-210ENST00000547591 TP53INP1Q96A56 240 aa8.08□□□□□ -1.12
RAB3IP-210ENST00000547591 CCDC74AQ96AQ1 378 aa8.08□□□□□ -1.12
RAB3IP-210ENST00000547591 EHD4Q9H223 541 aa8.08□□□□□ -1.12
RAB3IP-210ENST00000547591 TM4SF5O14894 197 aa8.07□□□□□ -1.12
RAB3IP-210ENST00000547591 KLHDC7BQ96G42 594 aa8.07□□□□□ -1.12
RAB3IP-210ENST00000547591 TCF12Q99081 682 aa8.07□□□□□ -1.12
RAB3IP-210ENST00000547591 CEP41Q9BYV8 373 aa8.07□□□□□ -1.12
RAB3IP-210ENST00000547591 TRAK1Q9UPV9 953 aa8.07□□□□□ -1.12
RAB3IP-210ENST00000547591 A0A096LPE4 126 aa8.06□□□□□ -1.12
RAB3IP-210ENST00000547591 A0A1W2PPZ6 126 aa8.06□□□□□ -1.12
RAB3IP-210ENST00000547591 TREHO43280 583 aa8.06□□□□□ -1.12
RAB3IP-210ENST00000547591 GLB1P16278 677 aa8.06□□□□□ -1.12
RAB3IP-210ENST00000547591 MEGF10Q96KG7 1140 aa8.06□□□□□ -1.12
RAB3IP-210ENST00000547591 CLEC4MQ9H2X3 399 aaPredicted RBP8.06□□□□□ -1.12
RAB3IP-210ENST00000547591 SEMA6BQ9H3T3 888 aa8.06□□□□□ -1.12
RAB3IP-210ENST00000547591 KCNK4Q9NYG8 393 aa8.06□□□□□ -1.12
RAB3IP-210ENST00000547591 METTL12A8MUP2 240 aa8.05□□□□□ -1.12
RAB3IP-210ENST00000547591 DYRK3O43781 588 aa8.05□□□□□ -1.12
RAB3IP-210ENST00000547591 ADAM11O75078 769 aa8.05□□□□□ -1.12
RAB3IP-210ENST00000547591 GADD45BO75293 160 aaPredicted RBP8.05□□□□□ -1.12
RAB3IP-210ENST00000547591 WISP1O95388 367 aa8.05□□□□□ -1.12
RAB3IP-210ENST00000547591 ESRRAP11474 423 aaPredicted RBP8.05□□□□□ -1.12
RAB3IP-210ENST00000547591 PLCB3Q01970 1234 aa8.05□□□□□ -1.12
RAB3IP-210ENST00000547591 PRPF40BQ6NWY9 871 aaKnown RBP8.05□□□□□ -1.12
RAB3IP-210ENST00000547591 DZIP1LQ8IYY4 767 aaKnown RBP8.05□□□□□ -1.12
RAB3IP-210ENST00000547591 FOXD4L4Q8WXT5 416 aaPredicted RBP8.05□□□□□ -1.12
RAB3IP-210ENST00000547591 ASB16Q96NS5 453 aa8.05□□□□□ -1.12
RAB3IP-210ENST00000547591 SOX1O00570 391 aaPredicted RBP8.04□□□□□ -1.12
RAB3IP-210ENST00000547591 ALX3O95076 343 aa8.04□□□□□ -1.12
RAB3IP-210ENST00000547591 NLRP12P59046 1061 aa8.04□□□□□ -1.12
RAB3IP-210ENST00000547591 PTPN12Q05209 780 aaKnown RBP8.04□□□□□ -1.12
RAB3IP-210ENST00000547591 PCDH1Q08174 1060 aa8.04□□□□□ -1.12
RAB3IP-210ENST00000547591 DSC3Q14574 896 aa8.04□□□□□ -1.12
RAB3IP-210ENST00000547591 UVSSAQ2YD98 709 aa8.04□□□□□ -1.12
RAB3IP-210ENST00000547591 AGGF1Q8N302 714 aaeCLIP8.04□□□□□ -1.12
RAB3IP-210ENST00000547591 DDX54Q8TDD1 881 aaKnown RBP8.04□□□□□ -1.12
RAB3IP-210ENST00000547591 UBASH3BQ8TF42 649 aa8.04□□□□□ -1.12
RAB3IP-210ENST00000547591 RNF208Q9H0X6 261 aa8.04□□□□□ -1.12
RAB3IP-210ENST00000547591 NLRP2Q9NX02 1062 aa8.04□□□□□ -1.12
RAB3IP-210ENST00000547591 DDX3YO15523 660 aaKnown RBP8.03□□□□□ -1.12
RAB3IP-210ENST00000547591 ITPKAP23677 461 aa8.03□□□□□ -1.12
RAB3IP-210ENST00000547591 GRIA4P48058 902 aa8.03□□□□□ -1.12
RAB3IP-210ENST00000547591 ENOX2Q16206 610 aaKnown RBP8.03□□□□□ -1.12
RAB3IP-210ENST00000547591 KIAA1211Q6ZU35 1233 aa8.03□□□□□ -1.12
RAB3IP-210ENST00000547591 AEBP1Q8IUX7 1158 aa8.03□□□□□ -1.12
RAB3IP-210ENST00000547591 RUSC1Q9BVN2 902 aa8.03□□□□□ -1.12
RAB3IP-210ENST00000547591 PNMA6FA0A0J9YX94 578 aa8.02□□□□□ -1.13
RAB3IP-210ENST00000547591 HP1BP3Q5SSJ5 553 aaPredicted RBP8.02□□□□□ -1.13
RAB3IP-210ENST00000547591 ANKRD34AQ69YU3 496 aa8.02□□□□□ -1.13
RAB3IP-210ENST00000547591 FBF1Q8TES7 1133 aa8.02□□□□□ -1.13
RAB3IP-210ENST00000547591 ZNF576Q9H609 170 aa8.02□□□□□ -1.13
RAB3IP-210ENST00000547591 ZFYVE1Q9HBF4 777 aa8.02□□□□□ -1.13
RAB3IP-210ENST00000547591 PPP4R2Q9NY27 417 aa8.02□□□□□ -1.13
RAB3IP-210ENST00000547591 GSTM4Q03013 218 aa8.01□□□□□ -1.13
RAB3IP-210ENST00000547591 FMR1Q06787 632 aaKnown RBP eCLIP8.01□□□□□ -1.13
RAB3IP-210ENST00000547591 SPRED3Q2MJR0 410 aa8.01□□□□□ -1.13
RAB3IP-210ENST00000547591 RPS26P11Q5JNZ5 115 aaPredicted RBP8.01□□□□□ -1.13
RAB3IP-210ENST00000547591 SND1Q7KZF4 910 aaKnown RBP eCLIP8.01□□□□□ -1.13
RAB3IP-210ENST00000547591 USP26Q9BXU7 913 aa8.01□□□□□ -1.13
RAB3IP-210ENST00000547591 ABCB6Q9NP58 842 aa8.01□□□□□ -1.13
RAB3IP-210ENST00000547591 MEGF11A6BM72 1044 aa8□□□□□ -1.13
RAB3IP-210ENST00000547591 B3GALT4O96024 378 aa8□□□□□ -1.13
RAB3IP-210ENST00000547591 ATP2B2Q01814 1243 aa8□□□□□ -1.13
RAB3IP-210ENST00000547591 GRM2Q14416 872 aa8□□□□□ -1.13
RAB3IP-210ENST00000547591 HGSNATQ68CP4 663 aa8□□□□□ -1.13
RAB3IP-210ENST00000547591 FDX2Q6P4F2 183 aa8□□□□□ -1.13
RAB3IP-210ENST00000547591 PRR23CQ6ZRP0 262 aa8□□□□□ -1.13
RAB3IP-210ENST00000547591 EPS8L3Q8TE67 593 aaKnown RBP8□□□□□ -1.13
RAB3IP-210ENST00000547591 TMEM238LA0A1B0GVL6 79 aa7.99□□□□□ -1.13
RAB3IP-210ENST00000547591 SART1O43290 800 aaKnown RBP7.99□□□□□ -1.13
RAB3IP-210ENST00000547591 XRCC5P13010 732 aaKnown RBP7.99□□□□□ -1.13
RAB3IP-210ENST00000547591 MAPK8P45983 427 aa7.99□□□□□ -1.13
RAB3IP-210ENST00000547591 ALG1LQ6GMV1 187 aa7.99□□□□□ -1.13
RAB3IP-210ENST00000547591 LOC100289279A0A1B0GTE1 492 aa7.98□□□□□ -1.13
RAB3IP-210ENST00000547591 DHX15O43143 795 aaKnown RBP7.98□□□□□ -1.13
RAB3IP-210ENST00000547591 CYP11A1P05108 521 aa7.98□□□□□ -1.13
RAB3IP-210ENST00000547591 ZNF423Q2M1K9 1284 aa7.98□□□□□ -1.13
RAB3IP-210ENST00000547591 UTP4Q969X6 686 aaKnown RBP7.98□□□□□ -1.13
RAB3IP-210ENST00000547591 FAM46AQ96IP4 442 aaKnown RBP7.98□□□□□ -1.13
RAB3IP-210ENST00000547591 UBL7Q96S82 380 aaPredicted RBP7.98□□□□□ -1.13
RAB3IP-210ENST00000547591 CYP4F12Q9HCS2 524 aa7.98□□□□□ -1.13
RAB3IP-210ENST00000547591 HNRNPUQ00839 825 aaKnown RBP eCLIP7.97□□□□□ -1.13
RAB3IP-210ENST00000547591 PRSS36Q5K4E3 855 aa7.97□□□□□ -1.13
RAB3IP-210ENST00000547591 NUTM2GQ5VZR2 741 aa7.97□□□□□ -1.13
RAB3IP-210ENST00000547591 DTHD1Q6ZMT9 781 aa7.97□□□□□ -1.13
RAB3IP-210ENST00000547591 GLIS3Q8NEA6 775 aa7.97□□□□□ -1.13
RAB3IP-210ENST00000547591 SRCIN1Q9C0H9 1055 aa7.97□□□□□ -1.13
RAB3IP-210ENST00000547591 HIF3AQ9Y2N7 669 aa7.97□□□□□ -1.13
RAB3IP-210ENST00000547591 GAS2O43903 313 aaKnown RBP7.96□□□□□ -1.14
RAB3IP-210ENST00000547591 FGD1P98174 961 aa7.96□□□□□ -1.14
RAB3IP-210ENST00000547591 AP3B2Q13367 1082 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms