RNA–Protein interactions for RNA: ENST00000547034.5

TMTC3-202, Transcript of transmembrane and tetratricopeptide repeat containing 3, humanhuman

TSL 1 (best)

Gene TMTC3, Length 1,842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMTC3-202ENST00000547034 AMIGO3Q86WK7 504 aa20.37■□□□□ 0.85
TMTC3-202ENST00000547034 ARHGEF1Q92888 912 aaKnown RBP20.37■□□□□ 0.85
TMTC3-202ENST00000547034 CHAMP1Q96JM3 812 aa20.37■□□□□ 0.85
TMTC3-202ENST00000547034 SETDB2Q96T68 719 aa20.37■□□□□ 0.85
TMTC3-202ENST00000547034 UBR3Q6ZT12 1888 aa20.37■□□□□ 0.85
TMTC3-202ENST00000547034 FGAP02671 866 aa20.37■□□□□ 0.85
TMTC3-202ENST00000547034 TTLL5Q6EMB2 1281 aa20.37■□□□□ 0.85
TMTC3-202ENST00000547034 SMIM5Q71RC9 77 aa20.37■□□□□ 0.85
TMTC3-202ENST00000547034 TCHHQ07283 1943 aa20.36■□□□□ 0.85
TMTC3-202ENST00000547034 SNAP23O00161 211 aa20.36■□□□□ 0.85
TMTC3-202ENST00000547034 UBE4AQ14139 1066 aa20.36■□□□□ 0.85
TMTC3-202ENST00000547034 IMMTQ16891 758 aaKnown RBP20.36■□□□□ 0.85
TMTC3-202ENST00000547034 WWC3Q9ULE0 1092 aa20.36■□□□□ 0.85
TMTC3-202ENST00000547034 ZMYM6O95789 1325 aa20.36■□□□□ 0.85
TMTC3-202ENST00000547034 ZNF532Q9HCE3 1301 aa20.36■□□□□ 0.85
TMTC3-202ENST00000547034 IDH1O75874 414 aaKnown RBP20.35■□□□□ 0.85
TMTC3-202ENST00000547034 PDCP20941 246 aa20.35■□□□□ 0.85
TMTC3-202ENST00000547034 BICDL1Q6ZP65 573 aa20.35■□□□□ 0.85
TMTC3-202ENST00000547034 GPT2Q8TD30 523 aa20.35■□□□□ 0.85
TMTC3-202ENST00000547034 ATP6V1DQ9Y5K8 247 aa20.35■□□□□ 0.85
TMTC3-202ENST00000547034 PFKFB2O60825 505 aa20.34■□□□□ 0.85
TMTC3-202ENST00000547034 MBD3O95983 291 aa20.34■□□□□ 0.85
TMTC3-202ENST00000547034 EVCP57679 992 aa20.34■□□□□ 0.85
TMTC3-202ENST00000547034 BRWD3Q6RI45 1802 aa20.34■□□□□ 0.85
TMTC3-202ENST00000547034 ADRA2BP18089 450 aa20.34■□□□□ 0.85
TMTC3-202ENST00000547034 BCAMP50895 628 aa20.34■□□□□ 0.85
TMTC3-202ENST00000547034 NBPF5PQ86XG9 351 aaPredicted RBP20.34■□□□□ 0.85
TMTC3-202ENST00000547034 BRF1Q92994 677 aa20.34■□□□□ 0.85
TMTC3-202ENST00000547034 WDR19Q8NEZ3 1342 aa20.34■□□□□ 0.85
TMTC3-202ENST00000547034 TNRC6CQ9HCJ0 1690 aaKnown RBP20.34■□□□□ 0.85
TMTC3-202ENST00000547034 MAP3K12Q12852 859 aa20.33■□□□□ 0.85
TMTC3-202ENST00000547034 ALX1Q15699 326 aa20.33■□□□□ 0.85
TMTC3-202ENST00000547034 TPTE2Q6XPS3 522 aa20.33■□□□□ 0.85
TMTC3-202ENST00000547034 NLRP3Q96P20 1036 aa20.33■□□□□ 0.85
TMTC3-202ENST00000547034 LLPHQ9BRT6 129 aaKnown RBP20.33■□□□□ 0.85
TMTC3-202ENST00000547034 MINPP1Q9UNW1 487 aa20.33■□□□□ 0.85
TMTC3-202ENST00000547034 ZBTB22O15209 634 aa20.32■□□□□ 0.84
TMTC3-202ENST00000547034 GTF2E1P29083 439 aaPredicted RBP20.32■□□□□ 0.84
TMTC3-202ENST00000547034 ZNF445P59923 1031 aa20.32■□□□□ 0.84
TMTC3-202ENST00000547034 CELF1Q92879 486 aaKnown RBP20.32■□□□□ 0.84
TMTC3-202ENST00000547034 STRBPQ96SI9 672 aaKnown RBP20.32■□□□□ 0.84
TMTC3-202ENST00000547034 MRE11P49959 708 aa20.32■□□□□ 0.84
TMTC3-202ENST00000547034 TRAPPC3LQ5T215 181 aa20.32■□□□□ 0.84
TMTC3-202ENST00000547034 MB21D2Q8IYB1 491 aaPredicted RBP20.32■□□□□ 0.84
TMTC3-202ENST00000547034 SMARCC2Q8TAQ2 1214 aa20.32■□□□□ 0.84
TMTC3-202ENST00000547034 QTRT2Q9H974 415 aaKnown RBP20.32■□□□□ 0.84
TMTC3-202ENST00000547034 LRRC4BQ9NT99 713 aa20.32■□□□□ 0.84
TMTC3-202ENST00000547034 TIAM2Q8IVF5 1701 aa20.31■□□□□ 0.84
TMTC3-202ENST00000547034 LARP1BQ659C4 914 aaKnown RBP20.31■□□□□ 0.84
TMTC3-202ENST00000547034 CARMIL3Q8ND23 1372 aa20.31■□□□□ 0.84
TMTC3-202ENST00000547034 ZNF274Q96GC6 653 aaPredicted RBP20.31■□□□□ 0.84
TMTC3-202ENST00000547034 LRRC2Q9BYS8 371 aa20.31■□□□□ 0.84
TMTC3-202ENST00000547034 SCRN1Q12765 414 aa20.3■□□□□ 0.84
TMTC3-202ENST00000547034 FAM196AQ6ZSG2 479 aa20.3■□□□□ 0.84
TMTC3-202ENST00000547034 NBPF3Q9H094 633 aa20.3■□□□□ 0.84
TMTC3-202ENST00000547034 COL1A1P02452 1464 aaPredicted RBP20.3■□□□□ 0.84
TMTC3-202ENST00000547034 PNPLA7Q6ZV29 1317 aa20.3■□□□□ 0.84
TMTC3-202ENST00000547034 ZNF213O14771 459 aa20.3■□□□□ 0.84
TMTC3-202ENST00000547034 XRCC6P12956 609 aaKnown RBP eCLIP20.3■□□□□ 0.84
TMTC3-202ENST00000547034 RFC4P35249 363 aa20.3■□□□□ 0.84
TMTC3-202ENST00000547034 RPS8P62241 208 aaKnown RBP20.3■□□□□ 0.84
TMTC3-202ENST00000547034 STK3Q13188 491 aa20.3■□□□□ 0.84
TMTC3-202ENST00000547034 GAS2L3Q86XJ1 694 aa20.3■□□□□ 0.84
TMTC3-202ENST00000547034 MAGEB6Q8N7X4 407 aa20.3■□□□□ 0.84
TMTC3-202ENST00000547034 TM4SF1P30408 202 aa20.29■□□□□ 0.84
TMTC3-202ENST00000547034 FGD1P98174 961 aa20.29■□□□□ 0.84
TMTC3-202ENST00000547034 SLC27A3Q5K4L6 730 aa20.29■□□□□ 0.84
TMTC3-202ENST00000547034 CAVIN1Q6NZI2 390 aaKnown RBP20.29■□□□□ 0.84
TMTC3-202ENST00000547034 NCOA7Q8NI08 942 aa20.29■□□□□ 0.84
TMTC3-202ENST00000547034 AIDAQ96BJ3 306 aa20.29■□□□□ 0.84
TMTC3-202ENST00000547034 CHMP4CQ96CF2 233 aa20.29■□□□□ 0.84
TMTC3-202ENST00000547034 GNL3LQ9NVN8 582 aaKnown RBP20.29■□□□□ 0.84
TMTC3-202ENST00000547034 PDS5AQ29RF7 1337 aaKnown RBP20.28■□□□□ 0.84
TMTC3-202ENST00000547034 HAND2P61296 217 aa20.28■□□□□ 0.84
TMTC3-202ENST00000547034 APOBRQ0VD83 1088 aa20.28■□□□□ 0.84
TMTC3-202ENST00000547034 ZSCAN23Q3MJ62 389 aa20.28■□□□□ 0.84
TMTC3-202ENST00000547034 USP48Q86UV5 1035 aa20.28■□□□□ 0.84
TMTC3-202ENST00000547034 GRPEL1Q9HAV7 217 aa20.28■□□□□ 0.84
TMTC3-202ENST00000547034 CACNA1SQ13698 1873 aa20.28■□□□□ 0.84
TMTC3-202ENST00000547034 CHD4Q14839 1912 aa20.28■□□□□ 0.84
TMTC3-202ENST00000547034 MCM5P33992 734 aa20.27■□□□□ 0.84
TMTC3-202ENST00000547034 NSFL1CQ9UNZ2 370 aaKnown RBP20.27■□□□□ 0.84
TMTC3-202ENST00000547034 SALL1Q9NSC2 1324 aa20.27■□□□□ 0.84
TMTC3-202ENST00000547034 MYH13Q9UKX3 1938 aa20.27■□□□□ 0.84
TMTC3-202ENST00000547034 PATL2C9JE40 543 aaKnown RBP20.27■□□□□ 0.84
TMTC3-202ENST00000547034 SEMA3EO15041 775 aa20.27■□□□□ 0.84
TMTC3-202ENST00000547034 JAK2O60674 1132 aa20.27■□□□□ 0.84
TMTC3-202ENST00000547034 PDIA3P30101 505 aaKnown RBP20.27■□□□□ 0.84
TMTC3-202ENST00000547034 ANTXR2P58335 489 aa20.27■□□□□ 0.84
TMTC3-202ENST00000547034 NFIXQ14938 502 aa20.27■□□□□ 0.84
TMTC3-202ENST00000547034 CDC37L1Q7L3B6 337 aa20.27■□□□□ 0.84
TMTC3-202ENST00000547034 FBXO33Q7Z6M2 555 aa20.27■□□□□ 0.84
TMTC3-202ENST00000547034 NSUN7Q8NE18 718 aaKnown RBP20.27■□□□□ 0.84
TMTC3-202ENST00000547034 ANKRD2Q9GZV1 360 aa20.27■□□□□ 0.84
TMTC3-202ENST00000547034 CNPY2Q9Y2B0 182 aa20.27■□□□□ 0.84
TMTC3-202ENST00000547034 VPS37CA5D8V6 355 aaPredicted RBP20.26■□□□□ 0.83
TMTC3-202ENST00000547034 GNAT2P19087 354 aa20.26■□□□□ 0.83
TMTC3-202ENST00000547034 HMGN5P82970 282 aaKnown RBP20.26■□□□□ 0.83
TMTC3-202ENST00000547034 FAM84BQ96KN1 310 aaPredicted RBP20.26■□□□□ 0.83
TMTC3-202ENST00000547034 EPB41L4AQ9HCS5 686 aaPredicted RBP20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms