RNA–Protein interactions for RNA: ENST00000546812.1

SSH1-205, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-205ENST00000546812 DPF3Q92784 378 aa11.95□□□□□ -0.5
SSH1-205ENST00000546812 GREM2Q9H772 168 aa11.95□□□□□ -0.5
SSH1-205ENST00000546812 PHAXQ9H814 394 aaKnown RBP11.95□□□□□ -0.5
SSH1-205ENST00000546812 ZFYVE28Q9HCC9 887 aa11.95□□□□□ -0.5
SSH1-205ENST00000546812 LAMA3Q16787 3333 aa11.94□□□□□ -0.5
SSH1-205ENST00000546812 MYO1BO43795 1136 aa11.94□□□□□ -0.5
SSH1-205ENST00000546812 KLRK1P26718 216 aa11.94□□□□□ -0.5
SSH1-205ENST00000546812 SH3TC2Q8TF17 1288 aa11.94□□□□□ -0.5
SSH1-205ENST00000546812 BRI3BPQ8WY22 251 aa11.94□□□□□ -0.5
SSH1-205ENST00000546812 OPTNQ96CV9 577 aa11.94□□□□□ -0.5
SSH1-205ENST00000546812 PRO3102Q9H379 93 aa11.94□□□□□ -0.5
SSH1-205ENST00000546812 TRIM35Q9UPQ4 493 aa11.94□□□□□ -0.5
SSH1-205ENST00000546812 PCDHAC2Q9Y5I4 1007 aa11.94□□□□□ -0.5
SSH1-205ENST00000546812 CLRN2A0PK11 232 aa11.93□□□□□ -0.5
SSH1-205ENST00000546812 SPDYE2BA6NHP3 402 aa11.93□□□□□ -0.5
SSH1-205ENST00000546812 SPDYE6P0CI01 402 aa11.93□□□□□ -0.5
SSH1-205ENST00000546812 RASA3Q14644 834 aa11.93□□□□□ -0.5
SSH1-205ENST00000546812 TAF1CQ15572 869 aaPredicted RBP11.93□□□□□ -0.5
SSH1-205ENST00000546812 CERS5Q8N5B7 392 aa11.93□□□□□ -0.5
SSH1-205ENST00000546812 METTL22Q9BUU2 404 aaPredicted RBP11.93□□□□□ -0.5
SSH1-205ENST00000546812 ANKRD2Q9GZV1 360 aa11.93□□□□□ -0.5
SSH1-205ENST00000546812 ELP3Q9H9T3 547 aa11.93□□□□□ -0.5
SSH1-205ENST00000546812 CD209Q9NNX6 404 aa11.93□□□□□ -0.5
SSH1-205ENST00000546812 GNRH1P01148 92 aa11.92□□□□□ -0.5
SSH1-205ENST00000546812 IGHMBP2P38935 993 aaKnown RBP11.92□□□□□ -0.5
SSH1-205ENST00000546812 GTF2A2P52657 109 aa11.92□□□□□ -0.5
SSH1-205ENST00000546812 CFAP100Q494V2 611 aa11.92□□□□□ -0.5
SSH1-205ENST00000546812 PRMT6Q96LA8 375 aaPredicted RBP11.92□□□□□ -0.5
SSH1-205ENST00000546812 VEZTQ9HBM0 779 aa11.92□□□□□ -0.5
SSH1-205ENST00000546812 CCL15-CCL14A0A0B4J2E2 113 aa11.91□□□□□ -0.5
SSH1-205ENST00000546812 WDHD1O75717 1129 aaPredicted RBP11.91□□□□□ -0.5
SSH1-205ENST00000546812 DDX58O95786 925 aaKnown RBP11.91□□□□□ -0.5
SSH1-205ENST00000546812 PRMT2P55345 433 aa11.91□□□□□ -0.5
SSH1-205ENST00000546812 KIF22Q14807 665 aa11.91□□□□□ -0.5
SSH1-205ENST00000546812 CCL15Q16663 113 aa11.91□□□□□ -0.5
SSH1-205ENST00000546812 FAM43AQ8N2R8 423 aa11.91□□□□□ -0.5
SSH1-205ENST00000546812 SHISA4Q96DD7 197 aa11.91□□□□□ -0.5
SSH1-205ENST00000546812 ARHGAP39Q9C0H5 1083 aa11.91□□□□□ -0.5
SSH1-205ENST00000546812 MBIPQ9NS73 344 aa11.91□□□□□ -0.5
SSH1-205ENST00000546812 AOX1Q06278 1338 aa11.9□□□□□ -0.5
SSH1-205ENST00000546812 F8W031 263 aaPredicted RBP11.9□□□□□ -0.5
SSH1-205ENST00000546812 TLR2O60603 784 aa11.9□□□□□ -0.5
SSH1-205ENST00000546812 KCNJ4P48050 445 aa11.9□□□□□ -0.5
SSH1-205ENST00000546812 LACTBP83111 547 aaPredicted RBP11.9□□□□□ -0.5
SSH1-205ENST00000546812 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.9□□□□□ -0.5
SSH1-205ENST00000546812 UBE2Q1Q7Z7E8 422 aa11.9□□□□□ -0.5
SSH1-205ENST00000546812 CCDC146Q8IYE0 955 aa11.9□□□□□ -0.5
SSH1-205ENST00000546812 NKX2-3Q8TAU0 364 aa11.9□□□□□ -0.5
SSH1-205ENST00000546812 CNKSR2Q8WXI2 1034 aa11.9□□□□□ -0.5
SSH1-205ENST00000546812 HTATIP2Q9BUP3 242 aa11.9□□□□□ -0.5
SSH1-205ENST00000546812 A0A1W2PPC1 479 aa11.89□□□□□ -0.51
SSH1-205ENST00000546812 IGKV5-2P06315 115 aa11.89□□□□□ -0.51
SSH1-205ENST00000546812 MNX1P50219 401 aaPredicted RBP11.89□□□□□ -0.51
SSH1-205ENST00000546812 FKBP1AP62942 108 aaKnown RBP11.89□□□□□ -0.51
SSH1-205ENST00000546812 MAP3K9P80192 1104 aa11.89□□□□□ -0.51
SSH1-205ENST00000546812 TNFAIP1Q13829 316 aa11.89□□□□□ -0.51
SSH1-205ENST00000546812 MTFR1Q15390 333 aa11.89□□□□□ -0.51
SSH1-205ENST00000546812 C15orf52Q6ZUT6 534 aaKnown RBP11.89□□□□□ -0.51
SSH1-205ENST00000546812 MPHOSPH8Q99549 860 aa11.89□□□□□ -0.51
SSH1-205ENST00000546812 ZCCHC17Q9NP64 241 aaKnown RBP11.89□□□□□ -0.51
SSH1-205ENST00000546812 MAP3K2Q9Y2U5 619 aa11.89□□□□□ -0.51
SSH1-205ENST00000546812 NR2E3Q9Y5X4 410 aa11.89□□□□□ -0.51
SSH1-205ENST00000546812 ELL2O00472 640 aaPredicted RBP11.88□□□□□ -0.51
SSH1-205ENST00000546812 ZNF853P0CG23 659 aa11.88□□□□□ -0.51
SSH1-205ENST00000546812 ITGA6P23229 1130 aa11.88□□□□□ -0.51
SSH1-205ENST00000546812 GJA8P48165 433 aa11.88□□□□□ -0.51
SSH1-205ENST00000546812 RBM5P52756 815 aaKnown RBP eCLIP11.88□□□□□ -0.51
SSH1-205ENST00000546812 CHRNDQ07001 517 aa11.88□□□□□ -0.51
SSH1-205ENST00000546812 VGLL4Q14135 290 aa11.88□□□□□ -0.51
SSH1-205ENST00000546812 RUNDC1Q96C34 613 aa11.88□□□□□ -0.51
SSH1-205ENST00000546812 TEPSINQ96N21 525 aa11.88□□□□□ -0.51
SSH1-205ENST00000546812 ZNF646O15015 1829 aaPredicted RBP11.88□□□□□ -0.51
SSH1-205ENST00000546812 IRS2Q9Y4H2 1338 aa11.87□□□□□ -0.51
SSH1-205ENST00000546812 H7C1W4 665 aa11.87□□□□□ -0.51
SSH1-205ENST00000546812 ZBTB7BO15156 539 aaPredicted RBP11.87□□□□□ -0.51
SSH1-205ENST00000546812 GJB1P08034 283 aa11.87□□□□□ -0.51
SSH1-205ENST00000546812 CETPP11597 493 aa11.87□□□□□ -0.51
SSH1-205ENST00000546812 IL1R1P14778 569 aa11.87□□□□□ -0.51
SSH1-205ENST00000546812 SPDYE2Q495Y8 402 aa11.87□□□□□ -0.51
SSH1-205ENST00000546812 KSR2Q6VAB6 950 aa11.87□□□□□ -0.51
SSH1-205ENST00000546812 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.87□□□□□ -0.51
SSH1-205ENST00000546812 ZNF70Q9UC06 446 aaPredicted RBP11.87□□□□□ -0.51
SSH1-205ENST00000546812 CSADQ9Y600 493 aa11.87□□□□□ -0.51
SSH1-205ENST00000546812 LAMB1P07942 1786 aa11.87□□□□□ -0.51
SSH1-205ENST00000546812 PI4KAP2A4QPH2 592 aa11.86□□□□□ -0.51
SSH1-205ENST00000546812 SPDYE5A6NIY4 337 aa11.86□□□□□ -0.51
SSH1-205ENST00000546812 BTBD19C9JJ37 291 aa11.86□□□□□ -0.51
SSH1-205ENST00000546812 SNAP23O00161 211 aa11.86□□□□□ -0.51
SSH1-205ENST00000546812 SOX1O00570 391 aaPredicted RBP11.86□□□□□ -0.51
SSH1-205ENST00000546812 NEXNQ0ZGT2 675 aa11.86□□□□□ -0.51
SSH1-205ENST00000546812 UBE3BQ7Z3V4 1068 aa11.86□□□□□ -0.51
SSH1-205ENST00000546812 ZNF804AQ7Z570 1209 aa11.86□□□□□ -0.51
SSH1-205ENST00000546812 CDAN1Q8IWY9 1227 aa11.86□□□□□ -0.51
SSH1-205ENST00000546812 PI4KAP1Q8N8J0 262 aa11.86□□□□□ -0.51
SSH1-205ENST00000546812 HELBQ8NG08 1087 aaPredicted RBP11.86□□□□□ -0.51
SSH1-205ENST00000546812 PLA2G12BQ9BX93 195 aa11.86□□□□□ -0.51
SSH1-205ENST00000546812 CHMP4AQ9BY43 222 aa11.86□□□□□ -0.51
SSH1-205ENST00000546812 SRRDQ9UH36 339 aa11.86□□□□□ -0.51
SSH1-205ENST00000546812 NEURL1BA8MQ27 555 aa11.85□□□□□ -0.51
SSH1-205ENST00000546812 TAF5LO75529 589 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms