RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 SYT1P21579 422 aa14.25□□□□□ -0.13
CCDC38-202ENST00000546386 TPTE2Q6XPS3 522 aa14.25□□□□□ -0.13
CCDC38-202ENST00000546386 GBP4Q96PP9 640 aa14.25□□□□□ -0.13
CCDC38-202ENST00000546386 TOMM22Q9NS69 142 aa14.25□□□□□ -0.13
CCDC38-202ENST00000546386 ANKIB1Q9P2G1 1089 aa14.25□□□□□ -0.13
CCDC38-202ENST00000546386 BTAF1O14981 1849 aa14.25□□□□□ -0.13
CCDC38-202ENST00000546386 NWD2Q9ULI1 1742 aa14.24□□□□□ -0.13
CCDC38-202ENST00000546386 E7EWF7 191 aa14.24□□□□□ -0.13
CCDC38-202ENST00000546386 PDE6AP16499 860 aa14.24□□□□□ -0.13
CCDC38-202ENST00000546386 FGFR2P21802 821 aa14.24□□□□□ -0.13
CCDC38-202ENST00000546386 GUCY1B3Q02153 619 aa14.24□□□□□ -0.13
CCDC38-202ENST00000546386 CTDSPL2Q05D32 466 aa14.24□□□□□ -0.13
CCDC38-202ENST00000546386 SDR42E1Q8WUS8 393 aa14.24□□□□□ -0.13
CCDC38-202ENST00000546386 RPS8P62241 208 aaKnown RBP14.24□□□□□ -0.13
CCDC38-202ENST00000546386 CUL4AQ13619 759 aa14.24□□□□□ -0.13
CCDC38-202ENST00000546386 RRP12Q5JTH9 1297 aaKnown RBP14.24□□□□□ -0.13
CCDC38-202ENST00000546386 ZKSCAN3Q9BRR0 538 aa14.24□□□□□ -0.13
CCDC38-202ENST00000546386 BCL11BQ9C0K0 894 aaPredicted RBP14.24□□□□□ -0.13
CCDC38-202ENST00000546386 GJB4Q9NTQ9 266 aa14.24□□□□□ -0.13
CCDC38-202ENST00000546386 RAI14Q9P0K7 980 aa14.24□□□□□ -0.13
CCDC38-202ENST00000546386 U3KPZ7 1027 aaPredicted RBP14.24□□□□□ -0.13
CCDC38-202ENST00000546386 MROH5Q6ZUA9 1318 aa14.23□□□□□ -0.13
CCDC38-202ENST00000546386 SPEF2Q9C093 1822 aa14.23□□□□□ -0.13
CCDC38-202ENST00000546386 EIF5BO60841 1220 aaKnown RBP14.23□□□□□ -0.13
CCDC38-202ENST00000546386 GADD45BO75293 160 aaPredicted RBP14.23□□□□□ -0.13
CCDC38-202ENST00000546386 MBD4O95243 580 aa14.23□□□□□ -0.13
CCDC38-202ENST00000546386 CAVIN1Q6NZI2 390 aaKnown RBP14.23□□□□□ -0.13
CCDC38-202ENST00000546386 CLEC4GQ6UXB4 293 aa14.23□□□□□ -0.13
CCDC38-202ENST00000546386 SENP2Q9HC62 589 aa14.23□□□□□ -0.13
CCDC38-202ENST00000546386 CYP2D7A0A087X1C5 515 aa14.23□□□□□ -0.13
CCDC38-202ENST00000546386 TXNRD1Q16881 649 aa14.23□□□□□ -0.13
CCDC38-202ENST00000546386 AIDAQ96BJ3 306 aa14.23□□□□□ -0.13
CCDC38-202ENST00000546386 PANK2Q9BZ23 570 aa14.23□□□□□ -0.13
CCDC38-202ENST00000546386 CNTNAP4Q9C0A0 1308 aa14.22□□□□□ -0.13
CCDC38-202ENST00000546386 CNBD1Q8NA66 436 aa14.22□□□□□ -0.13
CCDC38-202ENST00000546386 CDC5LQ99459 802 aaKnown RBP14.22□□□□□ -0.13
CCDC38-202ENST00000546386 MYL10Q9BUA6 226 aa14.22□□□□□ -0.13
CCDC38-202ENST00000546386 CNPY2Q9Y2B0 182 aa14.22□□□□□ -0.13
CCDC38-202ENST00000546386 ADD2P35612 726 aa14.22□□□□□ -0.13
CCDC38-202ENST00000546386 DYNLL1P63167 89 aaKnown RBP14.22□□□□□ -0.13
CCDC38-202ENST00000546386 NUCB2P80303 420 aa14.22□□□□□ -0.13
CCDC38-202ENST00000546386 CEBPZQ03701 1054 aaKnown RBP14.22□□□□□ -0.13
CCDC38-202ENST00000546386 ZNF827Q17R98 1081 aa14.22□□□□□ -0.13
CCDC38-202ENST00000546386 LCORLQ8N3X6 602 aa14.22□□□□□ -0.13
CCDC38-202ENST00000546386 PDGFDQ9GZP0 370 aaPredicted RBP14.22□□□□□ -0.13
CCDC38-202ENST00000546386 HELLSQ9NRZ9 838 aa14.22□□□□□ -0.13
CCDC38-202ENST00000546386 FIBPO43427 364 aa14.21□□□□□ -0.13
CCDC38-202ENST00000546386 GYS1P13807 737 aa14.21□□□□□ -0.13
CCDC38-202ENST00000546386 PSMA5P28066 241 aa14.21□□□□□ -0.13
CCDC38-202ENST00000546386 GAS2L3Q86XJ1 694 aa14.21□□□□□ -0.13
CCDC38-202ENST00000546386 CCDC82Q8N4S0 544 aa14.21□□□□□ -0.13
CCDC38-202ENST00000546386 APPBP2Q92624 585 aa14.21□□□□□ -0.13
CCDC38-202ENST00000546386 CIZ1Q9ULV3 898 aaPredicted RBP14.21□□□□□ -0.13
CCDC38-202ENST00000546386 OTUD7BQ6GQQ9 843 aa14.21□□□□□ -0.14
CCDC38-202ENST00000546386 CDC37L1Q7L3B6 337 aa14.21□□□□□ -0.14
CCDC38-202ENST00000546386 FAM84BQ96KN1 310 aaPredicted RBP14.21□□□□□ -0.14
CCDC38-202ENST00000546386 CWC22Q9HCG8 908 aaKnown RBP14.21□□□□□ -0.14
CCDC38-202ENST00000546386 CARMIL3Q8ND23 1372 aa14.2□□□□□ -0.14
CCDC38-202ENST00000546386 UBE2Q2LH0YL09 131 aa14.2□□□□□ -0.14
CCDC38-202ENST00000546386 ONECUT3O60422 494 aaPredicted RBP14.2□□□□□ -0.14
CCDC38-202ENST00000546386 MCM2P49736 904 aa14.2□□□□□ -0.14
CCDC38-202ENST00000546386 PRR5LQ6MZQ0 368 aa14.2□□□□□ -0.14
CCDC38-202ENST00000546386 TFIP11Q9UBB9 837 aaKnown RBP14.2□□□□□ -0.14
CCDC38-202ENST00000546386 MYH3P11055 1940 aa14.2□□□□□ -0.14
CCDC38-202ENST00000546386 RPAP1Q9BWH6 1393 aaPredicted RBP14.2□□□□□ -0.14
CCDC38-202ENST00000546386 MINDY4BA8MYZ0 360 aa14.2□□□□□ -0.14
CCDC38-202ENST00000546386 B4E1Z4 1266 aa14.2□□□□□ -0.14
CCDC38-202ENST00000546386 PRDM1O75626 825 aa14.2□□□□□ -0.14
CCDC38-202ENST00000546386 PRDX5P30044 214 aa14.2□□□□□ -0.14
CCDC38-202ENST00000546386 TM4SF1P30408 202 aa14.2□□□□□ -0.14
CCDC38-202ENST00000546386 LARP1BQ659C4 914 aaKnown RBP14.2□□□□□ -0.14
CCDC38-202ENST00000546386 TBC1D10CQ8IV04 446 aa14.2□□□□□ -0.14
CCDC38-202ENST00000546386 GPT2Q8TD30 523 aa14.2□□□□□ -0.14
CCDC38-202ENST00000546386 NBPF3Q9H094 633 aa14.2□□□□□ -0.14
CCDC38-202ENST00000546386 STX6O43752 255 aa14.19□□□□□ -0.14
CCDC38-202ENST00000546386 BRD1O95696 1058 aa14.19□□□□□ -0.14
CCDC38-202ENST00000546386 CYP7A1P22680 504 aa14.19□□□□□ -0.14
CCDC38-202ENST00000546386 DNM1Q05193 864 aaKnown RBP14.19□□□□□ -0.14
CCDC38-202ENST00000546386 SCRN1Q12765 414 aa14.19□□□□□ -0.14
CCDC38-202ENST00000546386 GRIK5Q16478 980 aa14.19□□□□□ -0.14
CCDC38-202ENST00000546386 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.19□□□□□ -0.14
CCDC38-202ENST00000546386 LMBRD1Q9NUN5 540 aa14.19□□□□□ -0.14
CCDC38-202ENST00000546386 TACC3Q9Y6A5 838 aa14.19□□□□□ -0.14
CCDC38-202ENST00000546386 DDX11L8A8MPP1 907 aa14.19□□□□□ -0.14
CCDC38-202ENST00000546386 ZNF213O14771 459 aa14.19□□□□□ -0.14
CCDC38-202ENST00000546386 SERPINB2P05120 415 aa14.19□□□□□ -0.14
CCDC38-202ENST00000546386 DDR1Q08345 913 aa14.19□□□□□ -0.14
CCDC38-202ENST00000546386 CMTR1Q8N1G2 835 aaKnown RBP14.19□□□□□ -0.14
CCDC38-202ENST00000546386 IL27Q8NEV9 243 aa14.19□□□□□ -0.14
CCDC38-202ENST00000546386 BSDC1Q9NW68 430 aaPredicted RBP14.19□□□□□ -0.14
CCDC38-202ENST00000546386 RIMBP2O15034 1052 aa14.18□□□□□ -0.14
CCDC38-202ENST00000546386 ARID4AP29374 1257 aaPredicted RBP14.18□□□□□ -0.14
CCDC38-202ENST00000546386 EPB41L4AQ9HCS5 686 aaPredicted RBP14.18□□□□□ -0.14
CCDC38-202ENST00000546386 TCHHQ07283 1943 aa14.18□□□□□ -0.14
CCDC38-202ENST00000546386 ANKRD36CQ5JPF3 1778 aa14.18□□□□□ -0.14
CCDC38-202ENST00000546386 RC3H1Q5TC82 1133 aaKnown RBP14.18□□□□□ -0.14
CCDC38-202ENST00000546386 ZNF384Q8TF68 577 aa14.18□□□□□ -0.14
CCDC38-202ENST00000546386 KCNB2Q92953 911 aa14.18□□□□□ -0.14
CCDC38-202ENST00000546386 FBXO3Q9UK99 471 aa14.18□□□□□ -0.14
CCDC38-202ENST00000546386 ATRNO75882 1429 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms