RNA–Protein interactions for RNA: ENST00000546272.5

C12orf43-209, Transcript of chromosome 12 open reading frame 43, humanhuman

TSL 2

Gene C12orf43, Length 1,339 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf43-209ENST00000546272 USP2O75604 605 aaPredicted RBP23.02■■□□□ 1.28
C12orf43-209ENST00000546272 HOXB7P09629 217 aa23.02■■□□□ 1.28
C12orf43-209ENST00000546272 RIC3Q7Z5B4 369 aa23.02■■□□□ 1.28
C12orf43-209ENST00000546272 MS4A4AQ96JQ5 239 aa23.02■■□□□ 1.28
C12orf43-209ENST00000546272 HTATIP2Q9BUP3 242 aa23.02■■□□□ 1.28
C12orf43-209ENST00000546272 BSDC1Q9NW68 430 aaPredicted RBP23.02■■□□□ 1.28
C12orf43-209ENST00000546272 APAF1O14727 1248 aa23.01■■□□□ 1.27
C12orf43-209ENST00000546272 MTMR14Q8NCE2 650 aa23.01■■□□□ 1.27
C12orf43-209ENST00000546272 CCDC191Q8NCU4 936 aa23.01■■□□□ 1.27
C12orf43-209ENST00000546272 OPTNQ96CV9 577 aa23.01■■□□□ 1.27
C12orf43-209ENST00000546272 SHISA4Q96DD7 197 aa23.01■■□□□ 1.27
C12orf43-209ENST00000546272 NR2E3Q9Y5X4 410 aa23.01■■□□□ 1.27
C12orf43-209ENST00000546272 SPEF2Q9C093 1822 aa23.01■■□□□ 1.27
C12orf43-209ENST00000546272 MYO1BO43795 1136 aa23■■□□□ 1.27
C12orf43-209ENST00000546272 GTF2IP78347 998 aa23■■□□□ 1.27
C12orf43-209ENST00000546272 KIF22Q14807 665 aa23■■□□□ 1.27
C12orf43-209ENST00000546272 NBPF12Q5TAG4 269 aaPredicted RBP23■■□□□ 1.27
C12orf43-209ENST00000546272 TXNRD3Q86VQ6 643 aa23■■□□□ 1.27
C12orf43-209ENST00000546272 NKX2-3Q8TAU0 364 aa23■■□□□ 1.27
C12orf43-209ENST00000546272 TRIM35Q9UPQ4 493 aa23■■□□□ 1.27
C12orf43-209ENST00000546272 OTOFQ9HC10 1997 aa23■■□□□ 1.27
C12orf43-209ENST00000546272 CHL1O00533 1208 aa22.99■■□□□ 1.27
C12orf43-209ENST00000546272 GNRH1P01148 92 aa22.99■■□□□ 1.27
C12orf43-209ENST00000546272 ELP3Q9H9T3 547 aa22.99■■□□□ 1.27
C12orf43-209ENST00000546272 LEMD3Q9Y2U8 911 aa22.99■■□□□ 1.27
C12orf43-209ENST00000546272 PRMT2P55345 433 aa22.98■■□□□ 1.27
C12orf43-209ENST00000546272 GOLGA2Q08379 1002 aa22.98■■□□□ 1.27
C12orf43-209ENST00000546272 BRI3BPQ8WY22 251 aa22.98■■□□□ 1.27
C12orf43-209ENST00000546272 ZSWIM8A7E2V4 1837 aa22.97■■□□□ 1.27
C12orf43-209ENST00000546272 CCL15-CCL14A0A0B4J2E2 113 aa22.97■■□□□ 1.27
C12orf43-209ENST00000546272 WDHD1O75717 1129 aaPredicted RBP22.97■■□□□ 1.27
C12orf43-209ENST00000546272 CCL15Q16663 113 aa22.97■■□□□ 1.27
C12orf43-209ENST00000546272 JARID2Q92833 1246 aaPredicted RBP22.97■■□□□ 1.27
C12orf43-209ENST00000546272 MYD88Q99836 296 aa22.97■■□□□ 1.27
C12orf43-209ENST00000546272 GTF2A2P52657 109 aa22.96■■□□□ 1.27
C12orf43-209ENST00000546272 LACTBP83111 547 aaPredicted RBP22.96■■□□□ 1.27
C12orf43-209ENST00000546272 UBE2Q1Q7Z7E8 422 aa22.96■■□□□ 1.27
C12orf43-209ENST00000546272 ARHGAP39Q9C0H5 1083 aa22.96■■□□□ 1.27
C12orf43-209ENST00000546272 CWC25Q9NXE8 425 aaPredicted RBP22.96■■□□□ 1.27
C12orf43-209ENST00000546272 MYH3P11055 1940 aa22.96■■□□□ 1.27
C12orf43-209ENST00000546272 CLRN2A0PK11 232 aa22.95■■□□□ 1.26
C12orf43-209ENST00000546272 SOX1O00570 391 aaPredicted RBP22.95■■□□□ 1.26
C12orf43-209ENST00000546272 CTSWP56202 376 aa22.95■■□□□ 1.26
C12orf43-209ENST00000546272 MTFR1Q15390 333 aa22.95■■□□□ 1.26
C12orf43-209ENST00000546272 VEZTQ9HBM0 779 aa22.95■■□□□ 1.26
C12orf43-209ENST00000546272 LAMA3Q16787 3333 aa22.94■■□□□ 1.26
C12orf43-209ENST00000546272 ZBTB7BO15156 539 aaPredicted RBP22.94■■□□□ 1.26
C12orf43-209ENST00000546272 TLR2O60603 784 aa22.94■■□□□ 1.26
C12orf43-209ENST00000546272 FAM43AQ8N2R8 423 aa22.94■■□□□ 1.26
C12orf43-209ENST00000546272 LRCH3Q96II8 777 aa22.94■■□□□ 1.26
C12orf43-209ENST00000546272 LAS1LQ9Y4W2 734 aaKnown RBP22.94■■□□□ 1.26
C12orf43-209ENST00000546272 PCDHAC2Q9Y5I4 1007 aa22.94■■□□□ 1.26
C12orf43-209ENST00000546272 SPDYE2BA6NHP3 402 aa22.93■■□□□ 1.26
C12orf43-209ENST00000546272 SPDYE6P0CI01 402 aa22.93■■□□□ 1.26
C12orf43-209ENST00000546272 GJA8P48165 433 aa22.93■■□□□ 1.26
C12orf43-209ENST00000546272 RASA3Q14644 834 aa22.93■■□□□ 1.26
C12orf43-209ENST00000546272 CFAP100Q494V2 611 aa22.93■■□□□ 1.26
C12orf43-209ENST00000546272 TTLL11Q8NHH1 800 aa22.93■■□□□ 1.26
C12orf43-209ENST00000546272 FAM9BQ8IZU0 186 aa22.92■■□□□ 1.26
C12orf43-209ENST00000546272 CERS5Q8N5B7 392 aa22.92■■□□□ 1.26
C12orf43-209ENST00000546272 PRMT6Q96LA8 375 aaPredicted RBP22.92■■□□□ 1.26
C12orf43-209ENST00000546272 GJB1P08034 283 aa22.91■■□□□ 1.26
C12orf43-209ENST00000546272 KLRK1P26718 216 aa22.91■■□□□ 1.26
C12orf43-209ENST00000546272 CNKSR2Q8WXI2 1034 aa22.91■■□□□ 1.26
C12orf43-209ENST00000546272 GREM2Q9H772 168 aa22.91■■□□□ 1.26
C12orf43-209ENST00000546272 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.9■■□□□ 1.26
C12orf43-209ENST00000546272 ANKRD2Q9GZV1 360 aa22.9■■□□□ 1.26
C12orf43-209ENST00000546272 PHAXQ9H814 394 aaKnown RBP22.9■■□□□ 1.26
C12orf43-209ENST00000546272 CD209Q9NNX6 404 aa22.9■■□□□ 1.26
C12orf43-209ENST00000546272 ZCCHC17Q9NP64 241 aaKnown RBP22.9■■□□□ 1.26
C12orf43-209ENST00000546272 TNFAIP1Q13829 316 aa22.89■■□□□ 1.26
C12orf43-209ENST00000546272 DUSP27Q5VZP5 1158 aa22.89■■□□□ 1.26
C12orf43-209ENST00000546272 F8W031 263 aaPredicted RBP22.88■■□□□ 1.25
C12orf43-209ENST00000546272 IGHMBP2P38935 993 aaKnown RBP22.88■■□□□ 1.25
C12orf43-209ENST00000546272 GPR153Q6NV75 609 aa22.88■■□□□ 1.25
C12orf43-209ENST00000546272 CCL5P13501 91 aa22.87■■□□□ 1.25
C12orf43-209ENST00000546272 GRK4P32298 578 aa22.87■■□□□ 1.25
C12orf43-209ENST00000546272 VGLL4Q14135 290 aa22.87■■□□□ 1.25
C12orf43-209ENST00000546272 DIEXFQ68CQ4 756 aaKnown RBP22.87■■□□□ 1.25
C12orf43-209ENST00000546272 METTL22Q9BUU2 404 aaPredicted RBP22.87■■□□□ 1.25
C12orf43-209ENST00000546272 SRRDQ9UH36 339 aa22.87■■□□□ 1.25
C12orf43-209ENST00000546272 CSADQ9Y600 493 aa22.87■■□□□ 1.25
C12orf43-209ENST00000546272 CETPP11597 493 aa22.86■■□□□ 1.25
C12orf43-209ENST00000546272 HOXD10P28358 340 aa22.86■■□□□ 1.25
C12orf43-209ENST00000546272 KCNJ4P48050 445 aa22.86■■□□□ 1.25
C12orf43-209ENST00000546272 RBM5P52756 815 aaKnown RBP eCLIP22.86■■□□□ 1.25
C12orf43-209ENST00000546272 MAP3K9P80192 1104 aa22.86■■□□□ 1.25
C12orf43-209ENST00000546272 HELBQ8NG08 1087 aaPredicted RBP22.86■■□□□ 1.25
C12orf43-209ENST00000546272 RAET1EQ8TD07 263 aa22.86■■□□□ 1.25
C12orf43-209ENST00000546272 RNF208Q9H0X6 261 aa22.86■■□□□ 1.25
C12orf43-209ENST00000546272 AOX1Q06278 1338 aa22.86■■□□□ 1.25
C12orf43-209ENST00000546272 EVI5O60447 810 aa22.85■■□□□ 1.25
C12orf43-209ENST00000546272 FARP2O94887 1054 aaPredicted RBP22.85■■□□□ 1.25
C12orf43-209ENST00000546272 FKBP1AP62942 108 aaKnown RBP22.85■■□□□ 1.25
C12orf43-209ENST00000546272 STXBP5LQ9Y2K9 1186 aa22.85■■□□□ 1.25
C12orf43-209ENST00000546272 RIPOR2Q9Y4F9 1068 aa22.85■■□□□ 1.25
C12orf43-209ENST00000546272 DEFB123Q8N688 67 aa22.84■■□□□ 1.25
C12orf43-209ENST00000546272 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.84■■□□□ 1.25
C12orf43-209ENST00000546272 TRIM47Q96LD4 638 aa22.84■■□□□ 1.25
C12orf43-209ENST00000546272 STAP2Q9UGK3 403 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms