RNA–Protein interactions for RNA: ENST00000545913.5

CIT-217, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 5

Gene CIT, Length 8,520 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-217ENST00000545913 LMBR1LQ6UX01 489 aa13.23□□□□□ -0.29
CIT-217ENST00000545913 MRPL50Q8N5N7 158 aaKnown RBP13.23□□□□□ -0.29
CIT-217ENST00000545913 JARID2Q92833 1246 aaPredicted RBP13.23□□□□□ -0.29
CIT-217ENST00000545913 BICRAQ9NZM4 1560 aa13.23□□□□□ -0.29
CIT-217ENST00000545913 MAST1Q9Y2H9 1570 aa13.23□□□□□ -0.29
CIT-217ENST00000545913 PICALMQ13492 652 aa13.23□□□□□ -0.29
CIT-217ENST00000545913 ATP2A2P16615 1042 aaKnown RBP13.22□□□□□ -0.29
CIT-217ENST00000545913 RIMS2Q9UQ26 1411 aa13.22□□□□□ -0.29
CIT-217ENST00000545913 ARHGEF12Q9NZN5 1544 aa13.22□□□□□ -0.29
CIT-217ENST00000545913 MXRA7P84157 204 aa13.22□□□□□ -0.29
CIT-217ENST00000545913 INTS4Q96HW7 963 aaKnown RBP13.22□□□□□ -0.29
CIT-217ENST00000545913 TIGD1Q96MW7 591 aa13.22□□□□□ -0.29
CIT-217ENST00000545913 CHRNA2Q15822 529 aa13.22□□□□□ -0.29
CIT-217ENST00000545913 CCDC129Q6ZRS4 1044 aa13.22□□□□□ -0.29
CIT-217ENST00000545913 DHX58Q96C10 678 aa13.22□□□□□ -0.29
CIT-217ENST00000545913 PLS1Q14651 629 aa13.22□□□□□ -0.29
CIT-217ENST00000545913 HSP90AA4PQ58FG1 418 aa13.22□□□□□ -0.29
CIT-217ENST00000545913 RUFY3Q7L099 469 aa13.22□□□□□ -0.29
CIT-217ENST00000545913 ARL1P40616 181 aaPredicted RBP13.22□□□□□ -0.29
CIT-217ENST00000545913 NMIQ13287 307 aaPredicted RBP13.22□□□□□ -0.29
CIT-217ENST00000545913 CCDC50Q8IVM0 306 aa13.22□□□□□ -0.29
CIT-217ENST00000545913 LINS1Q8NG48 757 aa13.22□□□□□ -0.29
CIT-217ENST00000545913 TCHPQ9BT92 498 aa13.22□□□□□ -0.29
CIT-217ENST00000545913 TXNDC16Q9P2K2 825 aa13.22□□□□□ -0.29
CIT-217ENST00000545913 EEF2P13639 858 aaKnown RBP13.22□□□□□ -0.29
CIT-217ENST00000545913 ARID5AQ03989 594 aa13.22□□□□□ -0.29
CIT-217ENST00000545913 DNMT1P26358 1616 aaKnown RBP13.21□□□□□ -0.29
CIT-217ENST00000545913 POLR3AO14802 1390 aaPredicted RBP13.21□□□□□ -0.29
CIT-217ENST00000545913 CCDC6Q16204 474 aa13.21□□□□□ -0.29
CIT-217ENST00000545913 APBB1IPQ7Z5R6 666 aaPredicted RBP13.21□□□□□ -0.29
CIT-217ENST00000545913 KIAA1524Q8TCG1 905 aa13.21□□□□□ -0.29
CIT-217ENST00000545913 ANKRD2Q9GZV1 360 aa13.21□□□□□ -0.29
CIT-217ENST00000545913 DNAJC25Q9H1X3 360 aa13.21□□□□□ -0.29
CIT-217ENST00000545913 MCM9Q9NXL9 1143 aa13.21□□□□□ -0.29
CIT-217ENST00000545913 LMOD1P29536 600 aaPredicted RBP13.21□□□□□ -0.29
CIT-217ENST00000545913 CEBPAP49715 358 aaPredicted RBP13.21□□□□□ -0.29
CIT-217ENST00000545913 TPTE2Q6XPS3 522 aa13.21□□□□□ -0.29
CIT-217ENST00000545913 OTUD6BQ8N6M0 293 aa13.21□□□□□ -0.29
CIT-217ENST00000545913 CFAP57Q96MR6 1250 aa13.21□□□□□ -0.29
CIT-217ENST00000545913 FRMD4BQ9Y2L6 1034 aa13.21□□□□□ -0.29
CIT-217ENST00000545913 PPP1R2P41236 205 aa13.21□□□□□ -0.29
CIT-217ENST00000545913 PCDHB15Q9Y5E8 787 aa13.21□□□□□ -0.29
CIT-217ENST00000545913 RNF113AO15541 343 aaKnown RBP13.21□□□□□ -0.3
CIT-217ENST00000545913 MCM7P33993 719 aa13.21□□□□□ -0.3
CIT-217ENST00000545913 MNAT1P51948 309 aa13.21□□□□□ -0.3
CIT-217ENST00000545913 MAP3K9P80192 1104 aa13.21□□□□□ -0.3
CIT-217ENST00000545913 CREB3L3Q68CJ9 461 aa13.21□□□□□ -0.3
CIT-217ENST00000545913 DHX32Q7L7V1 743 aaKnown RBP13.21□□□□□ -0.3
CIT-217ENST00000545913 ZC3H12CQ9C0D7 883 aaKnown RBP13.21□□□□□ -0.3
CIT-217ENST00000545913 PLXNC1O60486 1568 aa13.21□□□□□ -0.3
CIT-217ENST00000545913 NPATQ14207 1427 aa13.21□□□□□ -0.3
CIT-217ENST00000545913 MSL1Q68DK7 614 aa13.21□□□□□ -0.3
CIT-217ENST00000545913 RAD50Q92878 1312 aa13.21□□□□□ -0.3
CIT-217ENST00000545913 F8W031 263 aaPredicted RBP13.2□□□□□ -0.3
CIT-217ENST00000545913 RPL13P26373 211 aaKnown RBP13.2□□□□□ -0.3
CIT-217ENST00000545913 ZBTB16Q05516 673 aa13.2□□□□□ -0.3
CIT-217ENST00000545913 CNGA4Q8IV77 575 aa13.2□□□□□ -0.3
CIT-217ENST00000545913 SMC6Q96SB8 1091 aa13.2□□□□□ -0.3
CIT-217ENST00000545913 HS1BP3Q53T59 392 aa13.2□□□□□ -0.3
CIT-217ENST00000545913 IQUBQ8NA54 791 aa13.2□□□□□ -0.3
CIT-217ENST00000545913 SLU7O95391 586 aaKnown RBP13.2□□□□□ -0.3
CIT-217ENST00000545913 RNF216Q9NWF9 866 aaPredicted RBP13.2□□□□□ -0.3
CIT-217ENST00000545913 DZIP3Q86Y13 1208 aaKnown RBP13.2□□□□□ -0.3
CIT-217ENST00000545913 SIRT1Q96EB6 747 aa13.2□□□□□ -0.3
CIT-217ENST00000545913 LDHBP07195 334 aaKnown RBP13.2□□□□□ -0.3
CIT-217ENST00000545913 CEP128Q6ZU80 1094 aa13.2□□□□□ -0.3
CIT-217ENST00000545913 RGS22Q8NE09 1264 aa13.2□□□□□ -0.3
CIT-217ENST00000545913 PARD3Q8TEW0 1356 aa13.2□□□□□ -0.3
CIT-217ENST00000545913 KIAA0556O60303 1618 aa13.2□□□□□ -0.3
CIT-217ENST00000545913 IL2RBP14784 551 aa13.2□□□□□ -0.3
CIT-217ENST00000545913 VAV2P52735 878 aa13.2□□□□□ -0.3
CIT-217ENST00000545913 NAP1L4Q99733 375 aaKnown RBP13.2□□□□□ -0.3
CIT-217ENST00000545913 IQSEC3Q9UPP2 1182 aaPredicted RBP13.2□□□□□ -0.3
CIT-217ENST00000545913 ELP1O95163 1332 aa13.19□□□□□ -0.3
CIT-217ENST00000545913 DDB1Q16531 1140 aa13.19□□□□□ -0.3
CIT-217ENST00000545913 CCDC63Q8NA47 563 aa13.19□□□□□ -0.3
CIT-217ENST00000545913 MTRF1LQ9UGC7 380 aaKnown RBP13.19□□□□□ -0.3
CIT-217ENST00000545913 RTCBQ9Y3I0 505 aaKnown RBP13.19□□□□□ -0.3
CIT-217ENST00000545913 ATP6V0A2Q9Y487 856 aa13.19□□□□□ -0.3
CIT-217ENST00000545913 CCDC186Q7Z3E2 898 aa13.19□□□□□ -0.3
CIT-217ENST00000545913 TCEANC2Q96MN5 208 aa13.19□□□□□ -0.3
CIT-217ENST00000545913 GAS8O95995 478 aa13.19□□□□□ -0.3
CIT-217ENST00000545913 CA8P35219 290 aa13.19□□□□□ -0.3
CIT-217ENST00000545913 CCDC65Q8IXS2 484 aa13.19□□□□□ -0.3
CIT-217ENST00000545913 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.19□□□□□ -0.3
CIT-217ENST00000545913 V9GYY5 206 aaPredicted RBP13.19□□□□□ -0.3
CIT-217ENST00000545913 MAP7D1Q3KQU3 841 aa13.19□□□□□ -0.3
CIT-217ENST00000545913 PIK3C2GO75747 1445 aa13.19□□□□□ -0.3
CIT-217ENST00000545913 MAPK8IP2Q13387 824 aaPredicted RBP13.19□□□□□ -0.3
CIT-217ENST00000545913 NAP1L3Q99457 506 aaPredicted RBP13.19□□□□□ -0.3
CIT-217ENST00000545913 MAK16Q9BXY0 300 aaKnown RBP13.19□□□□□ -0.3
CIT-217ENST00000545913 PLCH2O75038 1416 aa13.19□□□□□ -0.3
CIT-217ENST00000545913 TMEM110-MUSTN1A8MSY1 372 aa13.19□□□□□ -0.3
CIT-217ENST00000545913 MTUS1Q9ULD2 1270 aa13.19□□□□□ -0.3
CIT-217ENST00000545913 ODF2LQ9ULJ1 636 aa13.19□□□□□ -0.3
CIT-217ENST00000545913 GCC2Q8IWJ2 1684 aa13.18□□□□□ -0.3
CIT-217ENST00000545913 AK2P54819 239 aa13.18□□□□□ -0.3
CIT-217ENST00000545913 LUC7L2Q9Y383 392 aaKnown RBP13.18□□□□□ -0.3
CIT-217ENST00000545913 PLCB3Q01970 1234 aa13.18□□□□□ -0.3
CIT-217ENST00000545913 EIF4A2Q14240 407 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms