RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 DZIP3Q86Y13 1208 aaKnown RBP14.24□□□□□ -0.13
COL4A6-209ENST00000545689 GOLGA1Q92805 767 aa14.24□□□□□ -0.13
COL4A6-209ENST00000545689 LRRC59Q96AG4 307 aaKnown RBP14.24□□□□□ -0.13
COL4A6-209ENST00000545689 VAT1LQ9HCJ6 419 aa14.24□□□□□ -0.13
COL4A6-209ENST00000545689 CTAGE9A4FU28 777 aa14.24□□□□□ -0.13
COL4A6-209ENST00000545689 SYCP3Q8IZU3 236 aa14.24□□□□□ -0.13
COL4A6-209ENST00000545689 DNAI1Q9UI46 699 aa14.24□□□□□ -0.13
COL4A6-209ENST00000545689 HOOK3Q86VS8 718 aa14.24□□□□□ -0.13
COL4A6-209ENST00000545689 SELENOOQ9BVL4 669 aa14.24□□□□□ -0.13
COL4A6-209ENST00000545689 MARCKSP29966 332 aaPredicted RBP14.24□□□□□ -0.13
COL4A6-209ENST00000545689 KRI1Q8N9T8 703 aaKnown RBP14.24□□□□□ -0.13
COL4A6-209ENST00000545689 STX8Q9UNK0 236 aa14.24□□□□□ -0.13
COL4A6-209ENST00000545689 IRS4O14654 1257 aaPredicted RBP14.24□□□□□ -0.13
COL4A6-209ENST00000545689 NOP2P46087 812 aaKnown RBP14.24□□□□□ -0.13
COL4A6-209ENST00000545689 ZNF445P59923 1031 aa14.24□□□□□ -0.13
COL4A6-209ENST00000545689 KRT24Q2M2I5 525 aa14.24□□□□□ -0.13
COL4A6-209ENST00000545689 HEATR3Q7Z4Q2 680 aa14.24□□□□□ -0.13
COL4A6-209ENST00000545689 CCDC113Q9H0I3 377 aa14.24□□□□□ -0.13
COL4A6-209ENST00000545689 TMX1Q9H3N1 280 aa14.24□□□□□ -0.13
COL4A6-209ENST00000545689 LMBR1Q8WVP7 490 aa14.23□□□□□ -0.13
COL4A6-209ENST00000545689 SLC27A2O14975 620 aa14.23□□□□□ -0.13
COL4A6-209ENST00000545689 NAPAP54920 295 aa14.23□□□□□ -0.13
COL4A6-209ENST00000545689 RRP36Q96EU6 259 aaKnown RBP14.23□□□□□ -0.13
COL4A6-209ENST00000545689 TTC12Q9H892 705 aaPredicted RBP14.23□□□□□ -0.13
COL4A6-209ENST00000545689 SGSM2O43147 1006 aa14.23□□□□□ -0.13
COL4A6-209ENST00000545689 KRT86O43790 486 aa14.23□□□□□ -0.13
COL4A6-209ENST00000545689 TNNI3KQ59H18 835 aa14.23□□□□□ -0.13
COL4A6-209ENST00000545689 FPGT-TNNI3KV9GXZ4 949 aa14.23□□□□□ -0.13
COL4A6-209ENST00000545689 ZNF830Q96NB3 372 aaPredicted RBP14.23□□□□□ -0.13
COL4A6-209ENST00000545689 NEO1Q92859 1461 aa14.23□□□□□ -0.13
COL4A6-209ENST00000545689 ABCC4O15439 1325 aa14.23□□□□□ -0.13
COL4A6-209ENST00000545689 FMNL3Q8IVF7 1028 aa14.23□□□□□ -0.13
COL4A6-209ENST00000545689 MPHOSPH6Q99547 160 aaKnown RBP14.23□□□□□ -0.13
COL4A6-209ENST00000545689 NIP7Q9Y221 180 aaKnown RBP eCLIP14.23□□□□□ -0.13
COL4A6-209ENST00000545689 SNX14Q9Y5W7 946 aa14.23□□□□□ -0.13
COL4A6-209ENST00000545689 EYA2O00167 538 aa14.22□□□□□ -0.13
COL4A6-209ENST00000545689 GNA11P29992 359 aa14.22□□□□□ -0.13
COL4A6-209ENST00000545689 IVLP07476 585 aa14.22□□□□□ -0.13
COL4A6-209ENST00000545689 ASIC1P78348 528 aa14.22□□□□□ -0.13
COL4A6-209ENST00000545689 SPECC1Q5M775 1068 aa14.22□□□□□ -0.13
COL4A6-209ENST00000545689 DHX58Q96C10 678 aa14.22□□□□□ -0.13
COL4A6-209ENST00000545689 OPA1O60313 960 aa14.22□□□□□ -0.13
COL4A6-209ENST00000545689 SPECC1LQ69YQ0 1117 aa14.22□□□□□ -0.13
COL4A6-209ENST00000545689 SPAG5Q96R06 1193 aa14.22□□□□□ -0.13
COL4A6-209ENST00000545689 KDM5CP41229 1560 aa14.22□□□□□ -0.13
COL4A6-209ENST00000545689 CLASP1Q7Z460 1538 aa14.22□□□□□ -0.13
COL4A6-209ENST00000545689 TUBB2AQ13885 445 aa14.22□□□□□ -0.13
COL4A6-209ENST00000545689 RILPL1Q5EBL4 403 aa14.22□□□□□ -0.13
COL4A6-209ENST00000545689 TUBB2BQ9BVA1 445 aa14.22□□□□□ -0.13
COL4A6-209ENST00000545689 MYL5Q02045 173 aa14.22□□□□□ -0.13
COL4A6-209ENST00000545689 IQUBQ8NA54 791 aa14.22□□□□□ -0.13
COL4A6-209ENST00000545689 FEZ1Q99689 392 aa14.22□□□□□ -0.13
COL4A6-209ENST00000545689 CLSTN2Q9H4D0 955 aa14.22□□□□□ -0.13
COL4A6-209ENST00000545689 RASAL2Q9UJF2 1139 aa14.22□□□□□ -0.13
COL4A6-209ENST00000545689 MYO5CQ9NQX4 1742 aa14.22□□□□□ -0.13
COL4A6-209ENST00000545689 TRIM14Q14142 442 aa14.21□□□□□ -0.13
COL4A6-209ENST00000545689 CNGA4Q8IV77 575 aa14.21□□□□□ -0.13
COL4A6-209ENST00000545689 MAGEB6Q8N7X4 407 aa14.21□□□□□ -0.13
COL4A6-209ENST00000545689 CEP170Q5SW79 1584 aa14.21□□□□□ -0.13
COL4A6-209ENST00000545689 CCDC174Q6PII3 467 aa14.21□□□□□ -0.13
COL4A6-209ENST00000545689 G2E3Q7L622 706 aa14.21□□□□□ -0.13
COL4A6-209ENST00000545689 MAATS1Q7Z4T9 603 aa14.21□□□□□ -0.13
COL4A6-209ENST00000545689 CTNNBL1Q8WYA6 563 aaPredicted RBP14.21□□□□□ -0.13
COL4A6-209ENST00000545689 PRDM10Q9NQV6 1147 aa14.21□□□□□ -0.13
COL4A6-209ENST00000545689 KRT13P13646 458 aa14.21□□□□□ -0.13
COL4A6-209ENST00000545689 KRT79Q5XKE5 535 aa14.21□□□□□ -0.13
COL4A6-209ENST00000545689 TSGA10Q9BZW7 698 aa14.21□□□□□ -0.13
COL4A6-209ENST00000545689 DENND2AQ9ULE3 1009 aa14.21□□□□□ -0.13
COL4A6-209ENST00000545689 MAGI3Q5TCQ9 1506 aa14.21□□□□□ -0.14
COL4A6-209ENST00000545689 SCLT1Q96NL6 688 aa14.21□□□□□ -0.14
COL4A6-209ENST00000545689 TM6SF1Q9BZW5 370 aa14.21□□□□□ -0.14
COL4A6-209ENST00000545689 MYO1BO43795 1136 aa14.2□□□□□ -0.14
COL4A6-209ENST00000545689 GTF2F1P35269 517 aaKnown RBP eCLIP14.2□□□□□ -0.14
COL4A6-209ENST00000545689 ZNF790Q6PG37 636 aa14.2□□□□□ -0.14
COL4A6-209ENST00000545689 GIMAP7Q8NHV1 300 aa14.2□□□□□ -0.14
COL4A6-209ENST00000545689 FERMT2Q96AC1 680 aa14.2□□□□□ -0.14
COL4A6-209ENST00000545689 CDCA7Q9BWT1 371 aaPredicted RBP14.2□□□□□ -0.14
COL4A6-209ENST00000545689 MYOM2P54296 1465 aa14.2□□□□□ -0.14
COL4A6-209ENST00000545689 PPFIA3O75145 1194 aa14.2□□□□□ -0.14
COL4A6-209ENST00000545689 DNA2P51530 1060 aa14.2□□□□□ -0.14
COL4A6-209ENST00000545689 PPP2R5BQ15173 497 aa14.2□□□□□ -0.14
COL4A6-209ENST00000545689 KIAA0753Q2KHM9 967 aa14.2□□□□□ -0.14
COL4A6-209ENST00000545689 PARP10Q53GL7 1025 aa14.2□□□□□ -0.14
COL4A6-209ENST00000545689 BCCIPQ9P287 314 aaKnown RBP eCLIP14.2□□□□□ -0.14
COL4A6-209ENST00000545689 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.2□□□□□ -0.14
COL4A6-209ENST00000545689 LMAN1P49257 510 aa14.2□□□□□ -0.14
COL4A6-209ENST00000545689 KIF5AQ12840 1032 aa14.2□□□□□ -0.14
COL4A6-209ENST00000545689 CERS3Q8IU89 383 aa14.2□□□□□ -0.14
COL4A6-209ENST00000545689 FBXO3Q9UK99 471 aa14.2□□□□□ -0.14
COL4A6-209ENST00000545689 PTGS1P23219 599 aa14.2□□□□□ -0.14
COL4A6-209ENST00000545689 CTNNA2P26232 953 aa14.2□□□□□ -0.14
COL4A6-209ENST00000545689 CCDC155Q8N6L0 562 aa14.2□□□□□ -0.14
COL4A6-209ENST00000545689 TTC37Q6PGP7 1564 aa14.19□□□□□ -0.14
COL4A6-209ENST00000545689 DEXIO95424 95 aa14.19□□□□□ -0.14
COL4A6-209ENST00000545689 LMOD1P29536 600 aaPredicted RBP14.19□□□□□ -0.14
COL4A6-209ENST00000545689 STMN4Q9H169 189 aaPredicted RBP14.19□□□□□ -0.14
COL4A6-209ENST00000545689 DDB1Q16531 1140 aa14.19□□□□□ -0.14
COL4A6-209ENST00000545689 TPTE2Q6XPS3 522 aa14.19□□□□□ -0.14
COL4A6-209ENST00000545689 IFNKQ9P0W0 207 aa14.19□□□□□ -0.14
COL4A6-209ENST00000545689 FAM135BQ49AJ0 1406 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms