RNA–Protein interactions for RNA: ENST00000544907.6

TNFAIP1-202, Transcript of TNF alpha induced protein 1, humanhuman

TSL 2 BASIC

Gene TNFAIP1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-202ENST00000544907 RGPD4Q7Z3J3 1758 aa21.28■■□□□ 1
TNFAIP1-202ENST00000544907 NUP98P52948 1817 aa21.28■■□□□ 1
TNFAIP1-202ENST00000544907 RGL2O15211 777 aa21.28■■□□□ 1
TNFAIP1-202ENST00000544907 GPTP24298 496 aa21.28■■□□□ 1
TNFAIP1-202ENST00000544907 UPF1Q92900 1129 aaKnown RBP eCLIP21.28■■□□□ 19e-6■□□□□ 11.1
TNFAIP1-202ENST00000544907 SALL1Q9NSC2 1324 aa21.27■■□□□ 1
TNFAIP1-202ENST00000544907 ZAP70P43403 619 aa21.27■■□□□ 1
TNFAIP1-202ENST00000544907 RESTQ13127 1097 aa21.27■■□□□ 1
TNFAIP1-202ENST00000544907 TTC6Q86TZ1 520 aa21.27■■□□□ 1
TNFAIP1-202ENST00000544907 NSUN7Q8NE18 718 aaKnown RBP21.27■■□□□ 1
TNFAIP1-202ENST00000544907 LPIN2Q92539 896 aa21.27■■□□□ 1
TNFAIP1-202ENST00000544907 FUCA2Q9BTY2 467 aa21.27■■□□□ 1
TNFAIP1-202ENST00000544907 CCDC87Q9NVE4 849 aa21.27■■□□□ 1
TNFAIP1-202ENST00000544907 CFAP45Q9UL16 551 aa21.27■■□□□ 1
TNFAIP1-202ENST00000544907 NOL7Q9UMY1 257 aaKnown RBP21.27■■□□□ 1
TNFAIP1-202ENST00000544907 BAG6P46379 1132 aa21.26■□□□□ 0.99
TNFAIP1-202ENST00000544907 STK3Q13188 491 aa21.26■□□□□ 0.99
TNFAIP1-202ENST00000544907 PUM3Q15397 648 aaKnown RBP21.26■□□□□ 0.99
TNFAIP1-202ENST00000544907 SMARCC1Q92922 1105 aaPredicted RBP21.26■□□□□ 0.99
TNFAIP1-202ENST00000544907 UBN2Q6ZU65 1347 aa21.26■□□□□ 0.99
TNFAIP1-202ENST00000544907 LY75O60449 1722 aa21.26■□□□□ 0.99
TNFAIP1-202ENST00000544907 LAMA4Q16363 1823 aa21.26■□□□□ 0.99
TNFAIP1-202ENST00000544907 FOXP2O15409 715 aa21.25■□□□□ 0.99
TNFAIP1-202ENST00000544907 FGFR2P21802 821 aa21.25■□□□□ 0.99
TNFAIP1-202ENST00000544907 ADD2P35612 726 aa21.25■□□□□ 0.99
TNFAIP1-202ENST00000544907 SCARF1Q14162 830 aa21.25■□□□□ 0.99
TNFAIP1-202ENST00000544907 WASHC4Q2M389 1173 aa21.25■□□□□ 0.99
TNFAIP1-202ENST00000544907 INTS5Q6P9B9 1019 aaKnown RBP21.25■□□□□ 0.99
TNFAIP1-202ENST00000544907 CCDC39Q9UFE4 941 aa21.25■□□□□ 0.99
TNFAIP1-202ENST00000544907 ARAP2Q8WZ64 1704 aa21.25■□□□□ 0.99
TNFAIP1-202ENST00000544907 ZNF831Q5JPB2 1677 aa21.25■□□□□ 0.99
TNFAIP1-202ENST00000544907 JAK2O60674 1132 aa21.24■□□□□ 0.99
TNFAIP1-202ENST00000544907 MCAMP43121 646 aa21.24■□□□□ 0.99
TNFAIP1-202ENST00000544907 ZMYM6O95789 1325 aa21.24■□□□□ 0.99
TNFAIP1-202ENST00000544907 H3BQV1 296 aa21.24■□□□□ 0.99
TNFAIP1-202ENST00000544907 DHX16O60231 1041 aaKnown RBP21.24■□□□□ 0.99
TNFAIP1-202ENST00000544907 PDIA3P30101 505 aaKnown RBP21.24■□□□□ 0.99
TNFAIP1-202ENST00000544907 IFFO2Q5TF58 517 aa21.24■□□□□ 0.99
TNFAIP1-202ENST00000544907 LEO1Q8WVC0 666 aaPredicted RBP21.24■□□□□ 0.99
TNFAIP1-202ENST00000544907 SPATA32Q96LK8 384 aa21.24■□□□□ 0.99
TNFAIP1-202ENST00000544907 DDX19AQ9NUU7 478 aaKnown RBP21.24■□□□□ 0.99
TNFAIP1-202ENST00000544907 PLSCR1O15162 318 aa21.23■□□□□ 0.99
TNFAIP1-202ENST00000544907 FGAP02671 866 aa21.23■□□□□ 0.99
TNFAIP1-202ENST00000544907 SYNE4Q8N205 404 aa21.23■□□□□ 0.99
TNFAIP1-202ENST00000544907 GPAA1O43292 621 aa21.22■□□□□ 0.99
TNFAIP1-202ENST00000544907 SLFNL1Q499Z3 407 aa21.22■□□□□ 0.99
TNFAIP1-202ENST00000544907 NCOA7Q8NI08 942 aa21.22■□□□□ 0.99
TNFAIP1-202ENST00000544907 CCDC85AQ96PX6 553 aaPredicted RBP21.22■□□□□ 0.99
TNFAIP1-202ENST00000544907 UTP14AQ9BVJ6 771 aaKnown RBP21.22■□□□□ 0.99
TNFAIP1-202ENST00000544907 TBC1D2BQ9UPU7 963 aa21.22■□□□□ 0.99
TNFAIP1-202ENST00000544907 MYH7P12883 1935 aa21.22■□□□□ 0.99
TNFAIP1-202ENST00000544907 AKAP11Q9UKA4 1901 aa21.22■□□□□ 0.99
TNFAIP1-202ENST00000544907 PTPDC1A2A3K4 754 aa21.21■□□□□ 0.99
TNFAIP1-202ENST00000544907 CTDNEP1O95476 244 aa21.21■□□□□ 0.99
TNFAIP1-202ENST00000544907 MSNP26038 577 aaKnown RBP21.21■□□□□ 0.99
TNFAIP1-202ENST00000544907 APOBRQ0VD83 1088 aa21.21■□□□□ 0.99
TNFAIP1-202ENST00000544907 RBM43Q6ZSC3 357 aaKnown RBP21.21■□□□□ 0.99
TNFAIP1-202ENST00000544907 FERMT3Q86UX7 667 aa21.21■□□□□ 0.99
TNFAIP1-202ENST00000544907 MB21D2Q8IYB1 491 aaPredicted RBP21.21■□□□□ 0.99
TNFAIP1-202ENST00000544907 PUS7LQ9H0K6 701 aaKnown RBP21.21■□□□□ 0.99
TNFAIP1-202ENST00000544907 LOC102724428A0A0B4J2F2 783 aa21.21■□□□□ 0.99
TNFAIP1-202ENST00000544907 ZNF213O14771 459 aa21.21■□□□□ 0.99
TNFAIP1-202ENST00000544907 CAMTA2O94983 1202 aa21.21■□□□□ 0.99
TNFAIP1-202ENST00000544907 CCDC192P0DO97 292 aa21.21■□□□□ 0.99
TNFAIP1-202ENST00000544907 CRKLP46109 303 aaKnown RBP21.21■□□□□ 0.99
TNFAIP1-202ENST00000544907 SIK1P57059 783 aa21.21■□□□□ 0.99
TNFAIP1-202ENST00000544907 ALX1Q15699 326 aa21.21■□□□□ 0.99
TNFAIP1-202ENST00000544907 CCDC102BQ68D86 513 aa21.21■□□□□ 0.99
TNFAIP1-202ENST00000544907 RNF214Q8ND24 703 aa21.21■□□□□ 0.99
TNFAIP1-202ENST00000544907 GOLGA6L4A6NEF3 574 aa21.2■□□□□ 0.98
TNFAIP1-202ENST00000544907 ZNF500O60304 480 aaPredicted RBP21.2■□□□□ 0.98
TNFAIP1-202ENST00000544907 SLC5A1P13866 664 aa21.2■□□□□ 0.98
TNFAIP1-202ENST00000544907 EN1Q05925 392 aaPredicted RBP21.2■□□□□ 0.98
TNFAIP1-202ENST00000544907 DEFB132Q7Z7B7 95 aa21.2■□□□□ 0.98
TNFAIP1-202ENST00000544907 NUP62CLQ9H1M0 184 aa21.2■□□□□ 0.98
TNFAIP1-202ENST00000544907 LAMB2P55268 1798 aa21.19■□□□□ 0.98
TNFAIP1-202ENST00000544907 ATP6V1AP38606 617 aa21.19■□□□□ 0.98
TNFAIP1-202ENST00000544907 CCDC152Q4G0S7 254 aa21.19■□□□□ 0.98
TNFAIP1-202ENST00000544907 TTLL5Q6EMB2 1281 aa21.19■□□□□ 0.98
TNFAIP1-202ENST00000544907 CLEC4GQ6UXB4 293 aa21.19■□□□□ 0.98
TNFAIP1-202ENST00000544907 LRRC2Q9BYS8 371 aa21.19■□□□□ 0.98
TNFAIP1-202ENST00000544907 ZKSCAN5Q9Y2L8 839 aa21.19■□□□□ 0.98
TNFAIP1-202ENST00000544907 DDX60Q8IY21 1712 aaKnown RBP21.19■□□□□ 0.98
TNFAIP1-202ENST00000544907 MAP3K11Q16584 847 aa21.18■□□□□ 0.98
TNFAIP1-202ENST00000544907 SLC9C2Q5TAH2 1124 aa21.18■□□□□ 0.98
TNFAIP1-202ENST00000544907 SUSD4Q5VX71 490 aa21.18■□□□□ 0.98
TNFAIP1-202ENST00000544907 RALYLQ86SE5 291 aaKnown RBP21.18■□□□□ 0.98
TNFAIP1-202ENST00000544907 RCOR1Q9UKL0 485 aa21.18■□□□□ 0.98
TNFAIP1-202ENST00000544907 CAVIN2O95810 425 aa21.18■□□□□ 0.98
TNFAIP1-202ENST00000544907 ZNF396Q96N95 335 aaPredicted RBP21.18■□□□□ 0.98
TNFAIP1-202ENST00000544907 ZNF652Q9Y2D9 606 aa21.18■□□□□ 0.98
TNFAIP1-202ENST00000544907 TCRBV5S4A2TA0A5A2 114 aa21.17■□□□□ 0.98
TNFAIP1-202ENST00000544907 PRC1O43663 620 aa21.17■□□□□ 0.98
TNFAIP1-202ENST00000544907 EZH2Q15910 746 aaKnown RBP21.17■□□□□ 0.98
TNFAIP1-202ENST00000544907 TXNRD1Q16881 649 aa21.17■□□□□ 0.98
TNFAIP1-202ENST00000544907 CAMKK2Q96RR4 588 aa21.17■□□□□ 0.98
TNFAIP1-202ENST00000544907 CCNL1Q9UK58 526 aaPredicted RBP21.17■□□□□ 0.98
TNFAIP1-202ENST00000544907 ADD1P35611 737 aaKnown RBP21.16■□□□□ 0.98
TNFAIP1-202ENST00000544907 TRDNQ13061 729 aa21.16■□□□□ 0.98
TNFAIP1-202ENST00000544907 SLC27A3Q5K4L6 730 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms