RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-222ENST00000544585 DSC3Q14574 896 aa8.52□□□□□ -1.05
CPSF7-222ENST00000544585 MTFR1Q15390 333 aa8.52□□□□□ -1.05
CPSF7-222ENST00000544585 MPNDQ8N594 471 aa8.52□□□□□ -1.05
CPSF7-222ENST00000544585 RAB6BQ9NRW1 208 aa8.52□□□□□ -1.05
CPSF7-222ENST00000544585 LRRC4BQ9NT99 713 aa8.52□□□□□ -1.05
CPSF7-222ENST00000544585 NLRP2Q9NX02 1062 aa8.52□□□□□ -1.05
CPSF7-222ENST00000544585 PGPEP1Q9NXJ5 209 aa8.52□□□□□ -1.05
CPSF7-222ENST00000544585 TFCP2L1Q9NZI6 479 aa8.52□□□□□ -1.05
CPSF7-222ENST00000544585 PARP2Q9UGN5 583 aa8.52□□□□□ -1.05
CPSF7-222ENST00000544585 TLL2Q9Y6L7 1015 aa8.52□□□□□ -1.05
CPSF7-222ENST00000544585 SBF2Q86WG5 1849 aa8.52□□□□□ -1.05
CPSF7-222ENST00000544585 CDK2AP1O14519 115 aa8.51□□□□□ -1.05
CPSF7-222ENST00000544585 ADH1CP00326 375 aa8.51□□□□□ -1.05
CPSF7-222ENST00000544585 NR5A1Q13285 461 aa8.51□□□□□ -1.05
CPSF7-222ENST00000544585 SF3A1Q15459 793 aaKnown RBP8.51□□□□□ -1.05
CPSF7-222ENST00000544585 ZNF827Q17R98 1081 aa8.51□□□□□ -1.05
CPSF7-222ENST00000544585 FAM129BQ96TA1 746 aa8.51□□□□□ -1.05
CPSF7-222ENST00000544585 DUSP9Q99956 384 aaKnown RBP8.51□□□□□ -1.05
CPSF7-222ENST00000544585 ARHGEF10LQ9HCE6 1279 aa8.51□□□□□ -1.05
CPSF7-222ENST00000544585 CEP350Q5VT06 3117 aa8.5□□□□□ -1.05
CPSF7-222ENST00000544585 SORBS3O60504 671 aa8.5□□□□□ -1.05
CPSF7-222ENST00000544585 CPSF1Q10570 1443 aaKnown RBP8.5□□□□□ -1.05
CPSF7-222ENST00000544585 TLR1Q15399 786 aa8.5□□□□□ -1.05
CPSF7-222ENST00000544585 NBPF15Q8N660 670 aa8.5□□□□□ -1.05
CPSF7-222ENST00000544585 TMEM87AQ8NBN3 555 aa8.5□□□□□ -1.05
CPSF7-222ENST00000544585 XAGE2Q96GT9 111 aa8.5□□□□□ -1.05
CPSF7-222ENST00000544585 MYO19Q96H55 970 aa8.5□□□□□ -1.05
CPSF7-222ENST00000544585 GPR182O15218 404 aa8.49□□□□□ -1.05
CPSF7-222ENST00000544585 HMGB1P09429 215 aaKnown RBP8.49□□□□□ -1.05
CPSF7-222ENST00000544585 ADD1P35611 737 aaKnown RBP8.49□□□□□ -1.05
CPSF7-222ENST00000544585 USP5P45974 858 aa8.49□□□□□ -1.05
CPSF7-222ENST00000544585 HDLBPQ00341 1268 aaKnown RBP8.49□□□□□ -1.05
CPSF7-222ENST00000544585 PSMD2Q13200 908 aa8.49□□□□□ -1.05
CPSF7-222ENST00000544585 TMC4Q7Z404 712 aa8.49□□□□□ -1.05
CPSF7-222ENST00000544585 ALKBH8Q96BT7 664 aaKnown RBP8.49□□□□□ -1.05
CPSF7-222ENST00000544585 FAM161BQ96MY7 647 aa8.49□□□□□ -1.05
CPSF7-222ENST00000544585 LRFN2Q9ULH4 789 aa8.49□□□□□ -1.05
CPSF7-222ENST00000544585 MYOM1P52179 1685 aa8.49□□□□□ -1.05
CPSF7-222ENST00000544585 PNPLA7Q6ZV29 1317 aa8.49□□□□□ -1.05
CPSF7-222ENST00000544585 SLIT3O75094 1523 aa8.49□□□□□ -1.05
CPSF7-222ENST00000544585 SERTM1A2A2V5 107 aa8.48□□□□□ -1.05
CPSF7-222ENST00000544585 HSPA6P17066 643 aa8.48□□□□□ -1.05
CPSF7-222ENST00000544585 C9orf131Q5VYM1 1079 aa8.48□□□□□ -1.05
CPSF7-222ENST00000544585 FLAD1Q8NFF5 587 aa8.48□□□□□ -1.05
CPSF7-222ENST00000544585 DDX54Q8TDD1 881 aaKnown RBP8.48□□□□□ -1.05
CPSF7-222ENST00000544585 UBXN4Q92575 508 aa8.48□□□□□ -1.05
CPSF7-222ENST00000544585 CNKSR1Q969H4 720 aa8.48□□□□□ -1.05
CPSF7-222ENST00000544585 NIF3L1Q9GZT8 377 aa8.48□□□□□ -1.05
CPSF7-222ENST00000544585 VTI1BQ9UEU0 232 aa8.48□□□□□ -1.05
CPSF7-222ENST00000544585 ZNF232Q9UNY5 417 aa8.48□□□□□ -1.05
CPSF7-222ENST00000544585 CD2APQ9Y5K6 639 aa8.48□□□□□ -1.05
CPSF7-222ENST00000544585 EMILIN1Q9Y6C2 1016 aa8.48□□□□□ -1.05
CPSF7-222ENST00000544585 KAT6BQ8WYB5 2073 aa8.48□□□□□ -1.05
CPSF7-222ENST00000544585 ARHGEF28Q8N1W1 1705 aaKnown RBP8.48□□□□□ -1.05
CPSF7-222ENST00000544585 ZBTB39O15060 712 aa8.47□□□□□ -1.05
CPSF7-222ENST00000544585 IL2RAP01589 272 aa8.47□□□□□ -1.05
CPSF7-222ENST00000544585 DAB2P98082 770 aa8.47□□□□□ -1.05
CPSF7-222ENST00000544585 ALG1LQ6GMV1 187 aa8.47□□□□□ -1.05
CPSF7-222ENST00000544585 ATCAYQ86WG3 371 aa8.47□□□□□ -1.05
CPSF7-222ENST00000544585 NLGN2Q8NFZ4 835 aa8.47□□□□□ -1.05
CPSF7-222ENST00000544585 ANKRD24Q8TF21 1146 aa8.47□□□□□ -1.05
CPSF7-222ENST00000544585 ESYT1Q9BSJ8 1104 aa8.47□□□□□ -1.05
CPSF7-222ENST00000544585 POLIQ9UNA4 740 aa8.47□□□□□ -1.05
CPSF7-222ENST00000544585 COL18A1P39060 1754 aa8.47□□□□□ -1.05
CPSF7-222ENST00000544585 LRRC37A3O60309 1634 aa8.47□□□□□ -1.05
CPSF7-222ENST00000544585 KTN1Q86UP2 1357 aaKnown RBP8.47□□□□□ -1.05
CPSF7-222ENST00000544585 TOPAZ1Q8N9V7 1692 aa8.46□□□□□ -1.05
CPSF7-222ENST00000544585 TNS2Q63HR2 1409 aa8.46□□□□□ -1.05
CPSF7-222ENST00000544585 IGHA2P01877 340 aa8.46□□□□□ -1.06
CPSF7-222ENST00000544585 YBX3P16989 372 aaKnown RBP eCLIP8.46□□□□□ -1.063e-7■■□□□ 12.8
CPSF7-222ENST00000544585 MZF1P28698 734 aaPredicted RBP8.46□□□□□ -1.06
CPSF7-222ENST00000544585 DNM1Q05193 864 aaKnown RBP8.46□□□□□ -1.06
CPSF7-222ENST00000544585 TEAD4Q15561 434 aa8.46□□□□□ -1.06
CPSF7-222ENST00000544585 C11orf91Q3C1V1 193 aa8.46□□□□□ -1.06
CPSF7-222ENST00000544585 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.46□□□□□ -1.06
CPSF7-222ENST00000544585 IP6K1Q92551 441 aa8.46□□□□□ -1.06
CPSF7-222ENST00000544585 SYTL4Q96C24 671 aaPredicted RBP8.46□□□□□ -1.06
CPSF7-222ENST00000544585 WWC3Q9ULE0 1092 aa8.46□□□□□ -1.06
CPSF7-222ENST00000544585 IQSEC3Q9UPP2 1182 aaPredicted RBP8.46□□□□□ -1.06
CPSF7-222ENST00000544585 USP31Q70CQ4 1352 aa8.46□□□□□ -1.06
CPSF7-222ENST00000544585 PNMA6FA0A0J9YX94 578 aa8.45□□□□□ -1.06
CPSF7-222ENST00000544585 EML1O00423 815 aa8.45□□□□□ -1.06
CPSF7-222ENST00000544585 SIAH2O43255 324 aa8.45□□□□□ -1.06
CPSF7-222ENST00000544585 ITGBL1O95965 494 aaPredicted RBP8.45□□□□□ -1.06
CPSF7-222ENST00000544585 NR3C2P08235 984 aa8.45□□□□□ -1.06
CPSF7-222ENST00000544585 PCSK2P16519 638 aa8.45□□□□□ -1.06
CPSF7-222ENST00000544585 NOS2P35228 1153 aa8.45□□□□□ -1.06
CPSF7-222ENST00000544585 HIRAP54198 1017 aaPredicted RBP8.45□□□□□ -1.06
CPSF7-222ENST00000544585 RTN1Q16799 776 aa8.45□□□□□ -1.06
CPSF7-222ENST00000544585 COL23A1Q86Y22 540 aaPredicted RBP8.45□□□□□ -1.06
CPSF7-222ENST00000544585 ALDH16A1Q8IZ83 802 aa8.45□□□□□ -1.06
CPSF7-222ENST00000544585 EDEM1Q92611 657 aa8.45□□□□□ -1.06
CPSF7-222ENST00000544585 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.45□□□□□ -1.06
CPSF7-222ENST00000544585 CCNL1Q9UK58 526 aaPredicted RBP8.45□□□□□ -1.06
CPSF7-222ENST00000544585 HCN4Q9Y3Q4 1203 aa8.45□□□□□ -1.06
CPSF7-222ENST00000544585 USP3Q9Y6I4 520 aa8.45□□□□□ -1.06
CPSF7-222ENST00000544585 ADH1AP07327 375 aa8.44□□□□□ -1.06
CPSF7-222ENST00000544585 DGKZQ13574 1117 aa8.44□□□□□ -1.06
CPSF7-222ENST00000544585 ENOX2Q16206 610 aaKnown RBP8.44□□□□□ -1.06
CPSF7-222ENST00000544585 LDLRAD1Q5T700 205 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms