RNA–Protein interactions for RNA: ENST00000544501.1

YBX3-214, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 181 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-214ENST00000544501 SETDB2Q96T68 719 aa4.08□□□□□ -1.76
YBX3-214ENST00000544501 DUSP9Q99956 384 aaKnown RBP4.08□□□□□ -1.76
YBX3-214ENST00000544501 C12orf49Q9H741 205 aa4.08□□□□□ -1.76
YBX3-214ENST00000544501 FAM8A1Q9UBU6 413 aa4.08□□□□□ -1.76
YBX3-214ENST00000544501 PARP2Q9UGN5 583 aa4.08□□□□□ -1.76
YBX3-214ENST00000544501 AK5Q9Y6K8 562 aa4.08□□□□□ -1.76
YBX3-214ENST00000544501 ELNP15502 786 aa4.07□□□□□ -1.76
YBX3-214ENST00000544501 EPHA1P21709 976 aa4.07□□□□□ -1.76
YBX3-214ENST00000544501 EIF4BP23588 611 aaKnown RBP4.07□□□□□ -1.76
YBX3-214ENST00000544501 GSTT1P30711 240 aa4.07□□□□□ -1.76
YBX3-214ENST00000544501 PIP4K2BP78356 416 aa4.07□□□□□ -1.76
YBX3-214ENST00000544501 XPCQ01831 940 aaPredicted RBP4.07□□□□□ -1.76
YBX3-214ENST00000544501 KCNMA1Q12791 1236 aa4.07□□□□□ -1.76
YBX3-214ENST00000544501 NXPE4Q6UWF7 544 aa4.07□□□□□ -1.76
YBX3-214ENST00000544501 ADAMTSL4Q6UY14 1074 aa4.07□□□□□ -1.76
YBX3-214ENST00000544501 FMR1NBQ8N0W7 255 aaPredicted RBP4.07□□□□□ -1.76
YBX3-214ENST00000544501 KLHL23Q8NBE8 558 aa4.07□□□□□ -1.76
YBX3-214ENST00000544501 GIPC2Q8TF65 315 aa4.07□□□□□ -1.76
YBX3-214ENST00000544501 OSBPL7Q9BZF2 842 aa4.07□□□□□ -1.76
YBX3-214ENST00000544501 CLEC4MQ9H2X3 399 aaPredicted RBP4.07□□□□□ -1.76
YBX3-214ENST00000544501 SOX17Q9H6I2 414 aaPredicted RBP4.07□□□□□ -1.76
YBX3-214ENST00000544501 OSGEPQ9NPF4 335 aa4.07□□□□□ -1.76
YBX3-214ENST00000544501 SH2B1Q9NRF2 756 aaPredicted RBP4.07□□□□□ -1.76
YBX3-214ENST00000544501 METTL12A8MUP2 240 aa4.06□□□□□ -1.76
YBX3-214ENST00000544501 LINC01387J3KSC0 135 aa4.06□□□□□ -1.76
YBX3-214ENST00000544501 FSCN2O14926 492 aa4.06□□□□□ -1.76
YBX3-214ENST00000544501 ESRRAP11474 423 aaPredicted RBP4.06□□□□□ -1.76
YBX3-214ENST00000544501 ZNF16P17020 682 aaPredicted RBP4.06□□□□□ -1.76
YBX3-214ENST00000544501 ARL4DP49703 201 aa4.06□□□□□ -1.76
YBX3-214ENST00000544501 PSMD2Q13200 908 aa4.06□□□□□ -1.76
YBX3-214ENST00000544501 IKBKEQ14164 716 aa4.06□□□□□ -1.76
YBX3-214ENST00000544501 SETDB1Q15047 1291 aa4.06□□□□□ -1.76
YBX3-214ENST00000544501 SPRED3Q2MJR0 410 aa4.06□□□□□ -1.76
YBX3-214ENST00000544501 DTHD1Q6ZMT9 781 aa4.06□□□□□ -1.76
YBX3-214ENST00000544501 DDX54Q8TDD1 881 aaKnown RBP4.06□□□□□ -1.76
YBX3-214ENST00000544501 ZNF576Q9H609 170 aa4.06□□□□□ -1.76
YBX3-214ENST00000544501 PPM1HQ9ULR3 514 aa4.06□□□□□ -1.76
YBX3-214ENST00000544501 DLL1O00548 723 aa4.05□□□□□ -1.76
YBX3-214ENST00000544501 SOX1O00570 391 aaPredicted RBP4.05□□□□□ -1.76
YBX3-214ENST00000544501 TM4SF5O14894 197 aa4.05□□□□□ -1.76
YBX3-214ENST00000544501 SORBS3O60504 671 aa4.05□□□□□ -1.76
YBX3-214ENST00000544501 DEAF1O75398 565 aaPredicted RBP4.05□□□□□ -1.76
YBX3-214ENST00000544501 B3GALT4O96024 378 aa4.05□□□□□ -1.76
YBX3-214ENST00000544501 COL8A1P27658 744 aa4.05□□□□□ -1.76
YBX3-214ENST00000544501 FCGRTP55899 365 aa4.05□□□□□ -1.76
YBX3-214ENST00000544501 TAGLNQ01995 201 aaKnown RBP4.05□□□□□ -1.76
YBX3-214ENST00000544501 PCDH1Q08174 1060 aa4.05□□□□□ -1.76
YBX3-214ENST00000544501 C19orf57Q0VDD7 668 aa4.05□□□□□ -1.76
YBX3-214ENST00000544501 SUZ12Q15022 739 aaKnown RBP4.05□□□□□ -1.76
YBX3-214ENST00000544501 IGF2-ASQ6U949 168 aa4.05□□□□□ -1.76
YBX3-214ENST00000544501 C3orf58Q8NDZ4 430 aa4.05□□□□□ -1.76
YBX3-214ENST00000544501 NACC1Q96RE7 527 aa4.05□□□□□ -1.76
YBX3-214ENST00000544501 MRS2Q9HD23 443 aa4.05□□□□□ -1.76
YBX3-214ENST00000544501 SEC31BQ9NQW1 1179 aa4.05□□□□□ -1.76
YBX3-214ENST00000544501 USP17L7P0C7H9 530 aa4.04□□□□□ -1.76
YBX3-214ENST00000544501 CD68P34810 354 aaPredicted RBP4.04□□□□□ -1.76
YBX3-214ENST00000544501 ZNF423Q2M1K9 1284 aa4.04□□□□□ -1.76
YBX3-214ENST00000544501 LENG1Q96BZ8 264 aaPredicted RBP4.04□□□□□ -1.76
YBX3-214ENST00000544501 DCAF5Q96JK2 942 aa4.04□□□□□ -1.76
YBX3-214ENST00000544501 CEP44Q9C0F1 390 aa4.04□□□□□ -1.76
YBX3-214ENST00000544501 AKAP2Q9Y2D5 859 aa4.04□□□□□ -1.76
YBX3-214ENST00000544501 C9orf172C9J069 976 aa4.03□□□□□ -1.76
YBX3-214ENST00000544501 APBA3O96018 575 aa4.03□□□□□ -1.76
YBX3-214ENST00000544501 VAMP1P23763 118 aa4.03□□□□□ -1.76
YBX3-214ENST00000544501 CDC25BP30305 580 aa4.03□□□□□ -1.76
YBX3-214ENST00000544501 GSK3AP49840 483 aa4.03□□□□□ -1.76
YBX3-214ENST00000544501 ST13P50502 369 aaKnown RBP4.03□□□□□ -1.76
YBX3-214ENST00000544501 NRG1Q02297 640 aaPredicted RBP4.03□□□□□ -1.76
YBX3-214ENST00000544501 RASSF7Q02833 373 aa4.03□□□□□ -1.76
YBX3-214ENST00000544501 PPP2R3AQ06190 1150 aa4.03□□□□□ -1.76
YBX3-214ENST00000544501 MRPL58Q14197 206 aaKnown RBP4.03□□□□□ -1.76
YBX3-214ENST00000544501 TXNDC11Q6PKC3 985 aa4.03□□□□□ -1.76
YBX3-214ENST00000544501 TMEM130Q8N3G9 435 aa4.03□□□□□ -1.76
YBX3-214ENST00000544501 GALNT11Q8NCW6 608 aa4.03□□□□□ -1.76
YBX3-214ENST00000544501 SLC7A3Q8WY07 619 aa4.03□□□□□ -1.76
YBX3-214ENST00000544501 KLHDC7BQ96G42 594 aa4.03□□□□□ -1.76
YBX3-214ENST00000544501 CRELD1Q96HD1 420 aa4.03□□□□□ -1.76
YBX3-214ENST00000544501 MRPL18Q9H0U6 180 aaKnown RBP4.03□□□□□ -1.76
YBX3-214ENST00000544501 RNF19AQ9NV58 838 aa4.03□□□□□ -1.76
YBX3-214ENST00000544501 TMEM39AQ9NV64 488 aa4.03□□□□□ -1.76
YBX3-214ENST00000544501 FAM229AH3BQW9 127 aa4.02□□□□□ -1.77
YBX3-214ENST00000544501 CYP11A1P05108 521 aa4.02□□□□□ -1.77
YBX3-214ENST00000544501 SELPP16109 830 aa4.02□□□□□ -1.77
YBX3-214ENST00000544501 FAAP100Q0VG06 881 aa4.02□□□□□ -1.77
YBX3-214ENST00000544501 AP3B2Q13367 1082 aa4.02□□□□□ -1.77
YBX3-214ENST00000544501 TAF1CQ15572 869 aaPredicted RBP4.02□□□□□ -1.77
YBX3-214ENST00000544501 GRIK4Q16099 956 aa4.02□□□□□ -1.77
YBX3-214ENST00000544501 FOXD4L6Q3SYB3 417 aaPredicted RBP4.02□□□□□ -1.77
YBX3-214ENST00000544501 FOXD4L3Q6VB84 417 aaPredicted RBP4.02□□□□□ -1.77
YBX3-214ENST00000544501 SV2BQ7L1I2 683 aa4.02□□□□□ -1.77
YBX3-214ENST00000544501 FOXD4L4Q8WXT5 416 aaPredicted RBP4.02□□□□□ -1.77
YBX3-214ENST00000544501 FAM161BQ96MY7 647 aa4.02□□□□□ -1.77
YBX3-214ENST00000544501 NECAB3Q96P71 396 aaPredicted RBP4.02□□□□□ -1.77
YBX3-214ENST00000544501 CARD10Q9BWT7 1032 aa4.02□□□□□ -1.77
YBX3-214ENST00000544501 VTI1BQ9UEU0 232 aa4.02□□□□□ -1.77
YBX3-214ENST00000544501 USP31Q70CQ4 1352 aa4.02□□□□□ -1.77
YBX3-214ENST00000544501 KRBA1A5PL33 1030 aa4.01□□□□□ -1.77
YBX3-214ENST00000544501 GDF11O95390 407 aa4.01□□□□□ -1.77
YBX3-214ENST00000544501 CTSHP09668 335 aa4.01□□□□□ -1.77
YBX3-214ENST00000544501 RLBP1P12271 317 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms