RNA–Protein interactions for RNA: ENST00000544474.5

PDZD4-209, Transcript of PDZ domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene PDZD4, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-209ENST00000544474 SYNE3Q6ZMZ3 975 aa14.78□□□□□ -0.04
PDZD4-209ENST00000544474 FAM212AQ96EL1 285 aa14.78□□□□□ -0.04
PDZD4-209ENST00000544474 PLEKHG2Q9H7P9 1386 aa14.77□□□□□ -0.04
PDZD4-209ENST00000544474 ACTN2P35609 894 aa14.77□□□□□ -0.04
PDZD4-209ENST00000544474 CCZ1BP86790 482 aa14.77□□□□□ -0.04
PDZD4-209ENST00000544474 CCZ1P86791 482 aaPredicted RBP14.77□□□□□ -0.04
PDZD4-209ENST00000544474 MCTP2Q6DN12 878 aa14.77□□□□□ -0.04
PDZD4-209ENST00000544474 NLRP2Q9NX02 1062 aa14.77□□□□□ -0.04
PDZD4-209ENST00000544474 SBNO1A3KN83 1393 aa14.77□□□□□ -0.04
PDZD4-209ENST00000544474 TOP1P11387 765 aaKnown RBP14.77□□□□□ -0.05
PDZD4-209ENST00000544474 TTC19Q6DKK2 380 aaPredicted RBP14.77□□□□□ -0.05
PDZD4-209ENST00000544474 SLC3A2P08195 630 aaKnown RBP14.76□□□□□ -0.05
PDZD4-209ENST00000544474 AKAP17AQ02040 695 aaKnown RBP14.76□□□□□ -0.05
PDZD4-209ENST00000544474 ZNF827Q17R98 1081 aa14.76□□□□□ -0.05
PDZD4-209ENST00000544474 NYAP1Q6ZVC0 841 aa14.76□□□□□ -0.05
PDZD4-209ENST00000544474 TRMT44Q8IYL2 757 aaKnown RBP14.76□□□□□ -0.05
PDZD4-209ENST00000544474 PDE11AQ9HCR9 933 aa14.76□□□□□ -0.05
PDZD4-209ENST00000544474 MAP3K5Q99683 1374 aa14.76□□□□□ -0.05
PDZD4-209ENST00000544474 KAT6BQ8WYB5 2073 aa14.76□□□□□ -0.05
PDZD4-209ENST00000544474 IGSF1Q8N6C5 1336 aa14.76□□□□□ -0.05
PDZD4-209ENST00000544474 HSP90B2PQ58FF3 399 aa14.76□□□□□ -0.05
PDZD4-209ENST00000544474 SNRKQ9NRH2 765 aa14.76□□□□□ -0.05
PDZD4-209ENST00000544474 NEMFO60524 1076 aa14.76□□□□□ -0.05
PDZD4-209ENST00000544474 SF3A3Q12874 501 aaKnown RBP eCLIP14.76□□□□□ -0.05
PDZD4-209ENST00000544474 NECTIN1Q15223 517 aa14.76□□□□□ -0.05
PDZD4-209ENST00000544474 MED4Q9NPJ6 270 aa14.76□□□□□ -0.05
PDZD4-209ENST00000544474 EIF3CLB5ME19 914 aaKnown RBP14.75□□□□□ -0.05
PDZD4-209ENST00000544474 N4BP1O75113 896 aaKnown RBP14.75□□□□□ -0.05
PDZD4-209ENST00000544474 GRIPAP1Q4V328 841 aa14.75□□□□□ -0.05
PDZD4-209ENST00000544474 NBPF6Q5VWK0 638 aa14.75□□□□□ -0.05
PDZD4-209ENST00000544474 ARMCX5Q6P1M9 558 aa14.75□□□□□ -0.05
PDZD4-209ENST00000544474 CNKSR2Q8WXI2 1034 aa14.75□□□□□ -0.05
PDZD4-209ENST00000544474 NBPF4Q96M43 638 aa14.75□□□□□ -0.05
PDZD4-209ENST00000544474 NEK1Q96PY6 1258 aa14.75□□□□□ -0.05
PDZD4-209ENST00000544474 EIF3CQ99613 913 aaKnown RBP14.75□□□□□ -0.05
PDZD4-209ENST00000544474 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.75□□□□□ -0.05
PDZD4-209ENST00000544474 TMEM232C9JQI7 657 aa14.75□□□□□ -0.05
PDZD4-209ENST00000544474 ZMYND10O75800 440 aa14.75□□□□□ -0.05
PDZD4-209ENST00000544474 NDUFA8P51970 172 aa14.75□□□□□ -0.05
PDZD4-209ENST00000544474 BEND3Q5T5X7 828 aa14.75□□□□□ -0.05
PDZD4-209ENST00000544474 EXOC4Q96A65 974 aa14.75□□□□□ -0.05
PDZD4-209ENST00000544474 USP6P35125 1406 aa14.75□□□□□ -0.05
PDZD4-209ENST00000544474 TTC21AQ8NDW8 1320 aa14.75□□□□□ -0.05
PDZD4-209ENST00000544474 ZRANB2O95218 330 aaKnown RBP eCLIP14.75□□□□□ -0.05
PDZD4-209ENST00000544474 MRPS25P82663 173 aaKnown RBP14.75□□□□□ -0.05
PDZD4-209ENST00000544474 MTX1Q13505 466 aa14.75□□□□□ -0.05
PDZD4-209ENST00000544474 TSGA10IPQ3SY00 556 aa14.75□□□□□ -0.05
PDZD4-209ENST00000544474 MICALL1Q8N3F8 863 aa14.75□□□□□ -0.05
PDZD4-209ENST00000544474 A0A0G2JLW4 131 aa14.74□□□□□ -0.05
PDZD4-209ENST00000544474 PTPDC1A2A3K4 754 aa14.74□□□□□ -0.05
PDZD4-209ENST00000544474 PDE6BP35913 854 aa14.74□□□□□ -0.05
PDZD4-209ENST00000544474 STX17P56962 302 aa14.74□□□□□ -0.05
PDZD4-209ENST00000544474 PPP2R3AQ06190 1150 aa14.74□□□□□ -0.05
PDZD4-209ENST00000544474 PROSER3Q2NL68 480 aa14.74□□□□□ -0.05
PDZD4-209ENST00000544474 KIF4BQ2VIQ3 1234 aa14.74□□□□□ -0.05
PDZD4-209ENST00000544474 ELP1O95163 1332 aa14.74□□□□□ -0.05
PDZD4-209ENST00000544474 ERBB3P21860 1342 aa14.74□□□□□ -0.05
PDZD4-209ENST00000544474 SASH3O75995 380 aa14.74□□□□□ -0.05
PDZD4-209ENST00000544474 DPF2Q92785 391 aa14.74□□□□□ -0.05
PDZD4-209ENST00000544474 ADAM21Q9UKJ8 722 aa14.74□□□□□ -0.05
PDZD4-209ENST00000544474 MAP3K2Q9Y2U5 619 aa14.74□□□□□ -0.05
PDZD4-209ENST00000544474 TULP1O00294 542 aaPredicted RBP14.73□□□□□ -0.05
PDZD4-209ENST00000544474 ATP8B1O43520 1251 aa14.73□□□□□ -0.05
PDZD4-209ENST00000544474 IQCB1Q15051 598 aa14.73□□□□□ -0.05
PDZD4-209ENST00000544474 EAF2Q96CJ1 260 aaPredicted RBP14.73□□□□□ -0.05
PDZD4-209ENST00000544474 OVOS2A0A0J9YW53 1432 aa14.73□□□□□ -0.05
PDZD4-209ENST00000544474 OVOS2Q6IE36 1432 aa14.73□□□□□ -0.05
PDZD4-209ENST00000544474 WASHC4Q2M389 1173 aa14.73□□□□□ -0.05
PDZD4-209ENST00000544474 MMS22LQ6ZRQ5 1243 aa14.73□□□□□ -0.05
PDZD4-209ENST00000544474 RAI14Q9P0K7 980 aa14.73□□□□□ -0.05
PDZD4-209ENST00000544474 BTBD11A6QL63 1104 aa14.73□□□□□ -0.05
PDZD4-209ENST00000544474 GSCP56915 257 aaPredicted RBP14.73□□□□□ -0.05
PDZD4-209ENST00000544474 ETF1P62495 437 aaKnown RBP14.73□□□□□ -0.05
PDZD4-209ENST00000544474 SWT1Q5T5J6 900 aaKnown RBP14.73□□□□□ -0.05
PDZD4-209ENST00000544474 SUGP1Q8IWZ8 645 aaKnown RBP14.73□□□□□ -0.05
PDZD4-209ENST00000544474 MAP4K1Q92918 833 aa14.73□□□□□ -0.05
PDZD4-209ENST00000544474 WDR24Q96S15 920 aa14.73□□□□□ -0.05
PDZD4-209ENST00000544474 CENPHQ9H3R5 247 aa14.73□□□□□ -0.05
PDZD4-209ENST00000544474 RPS6KB1P23443 525 aa14.72□□□□□ -0.05
PDZD4-209ENST00000544474 FANCCQ00597 558 aa14.72□□□□□ -0.05
PDZD4-209ENST00000544474 LRCH2Q5VUJ6 765 aa14.72□□□□□ -0.05
PDZD4-209ENST00000544474 HOXC9P31274 260 aa14.72□□□□□ -0.05
PDZD4-209ENST00000544474 REXO1L1PQ8IX06 675 aa14.72□□□□□ -0.05
PDZD4-209ENST00000544474 PARD6BQ9BYG5 372 aa14.72□□□□□ -0.05
PDZD4-209ENST00000544474 ORC3Q9UBD5 711 aaPredicted RBP14.72□□□□□ -0.05
PDZD4-209ENST00000544474 DNA2P51530 1060 aa14.72□□□□□ -0.05
PDZD4-209ENST00000544474 JAKMIP3Q5VZ66 844 aa14.72□□□□□ -0.05
PDZD4-209ENST00000544474 RIC3Q7Z5B4 369 aa14.72□□□□□ -0.05
PDZD4-209ENST00000544474 BABAM1Q9NWV8 329 aa14.72□□□□□ -0.05
PDZD4-209ENST00000544474 PSD3Q9NYI0 1048 aa14.72□□□□□ -0.05
PDZD4-209ENST00000544474 CLIC4Q9Y696 253 aa14.72□□□□□ -0.05
PDZD4-209ENST00000544474 MNAT1P51948 309 aa14.71□□□□□ -0.05
PDZD4-209ENST00000544474 SCRN1Q12765 414 aa14.71□□□□□ -0.05
PDZD4-209ENST00000544474 DHX40Q8IX18 779 aaKnown RBP14.71□□□□□ -0.05
PDZD4-209ENST00000544474 IQUBQ8NA54 791 aa14.71□□□□□ -0.05
PDZD4-209ENST00000544474 DBF4Q9UBU7 674 aaPredicted RBP14.71□□□□□ -0.05
PDZD4-209ENST00000544474 FAN1Q9Y2M0 1017 aa14.71□□□□□ -0.05
PDZD4-209ENST00000544474 ATP5J2-PTCD1G3V325 749 aa14.71□□□□□ -0.05
PDZD4-209ENST00000544474 PTCD1O75127 700 aaKnown RBP14.71□□□□□ -0.05
PDZD4-209ENST00000544474 CAVIN2O95810 425 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms