RNA–Protein interactions for RNA: ENST00000543184.5

PRAME-214, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,758 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-214ENST00000543184 PKD1L3Q7Z443 1732 aa16.63■□□□□ 0.25
PRAME-214ENST00000543184 N4BP2Q86UW6 1770 aaPredicted RBP16.62■□□□□ 0.25
PRAME-214ENST00000543184 ONECUT3O60422 494 aaPredicted RBP16.62■□□□□ 0.25
PRAME-214ENST00000543184 ALDH1L1O75891 902 aa16.62■□□□□ 0.25
PRAME-214ENST00000543184 SNW1Q13573 536 aaKnown RBP16.62■□□□□ 0.25
PRAME-214ENST00000543184 LINS1Q8NG48 757 aa16.62■□□□□ 0.25
PRAME-214ENST00000543184 ZBTB9Q96C00 473 aa16.62■□□□□ 0.25
PRAME-214ENST00000543184 DDX41Q9UJV9 622 aaKnown RBP16.62■□□□□ 0.25
PRAME-214ENST00000543184 ERICH4A6NGS2 130 aa16.62■□□□□ 0.25
PRAME-214ENST00000543184 CCZ1BP86790 482 aa16.62■□□□□ 0.25
PRAME-214ENST00000543184 CCZ1P86791 482 aaPredicted RBP16.62■□□□□ 0.25
PRAME-214ENST00000543184 GORABQ5T7V8 394 aa16.62■□□□□ 0.25
PRAME-214ENST00000543184 FBXO38Q6PIJ6 1188 aa16.62■□□□□ 0.25
PRAME-214ENST00000543184 FSIP1Q8NA03 581 aa16.62■□□□□ 0.25
PRAME-214ENST00000543184 PTPDC1A2A3K4 754 aa16.61■□□□□ 0.25
PRAME-214ENST00000543184 HIP1O00291 1037 aa16.61■□□□□ 0.25
PRAME-214ENST00000543184 ZNF609O15014 1411 aa16.61■□□□□ 0.25
PRAME-214ENST00000543184 TOGARAM1Q9Y4F4 1720 aa16.61■□□□□ 0.25
PRAME-214ENST00000543184 ATP6V1AP38606 617 aa16.61■□□□□ 0.25
PRAME-214ENST00000543184 PAXBP1Q9Y5B6 917 aa16.61■□□□□ 0.25
PRAME-214ENST00000543184 POLR3DP05423 398 aaPredicted RBP16.6■□□□□ 0.25
PRAME-214ENST00000543184 COPS6Q7L5N1 327 aa16.6■□□□□ 0.25
PRAME-214ENST00000543184 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.6■□□□□ 0.25
PRAME-214ENST00000543184 XAGE3Q8WTP9 111 aa16.6■□□□□ 0.25
PRAME-214ENST00000543184 PDIA6Q15084 440 aa16.6■□□□□ 0.25
PRAME-214ENST00000543184 NSUN7Q8NE18 718 aaKnown RBP16.6■□□□□ 0.25
PRAME-214ENST00000543184 FEZ1Q99689 392 aa16.6■□□□□ 0.25
PRAME-214ENST00000543184 BCL9O00512 1426 aa16.6■□□□□ 0.25
PRAME-214ENST00000543184 GOLGA8FQ08AF8 430 aa16.6■□□□□ 0.25
PRAME-214ENST00000543184 GOLGA8DPQ0D2H9 430 aa16.6■□□□□ 0.25
PRAME-214ENST00000543184 STX1AQ16623 288 aa16.6■□□□□ 0.25
PRAME-214ENST00000543184 TTLL5Q6EMB2 1281 aa16.6■□□□□ 0.25
PRAME-214ENST00000543184 UBE3BQ7Z3V4 1068 aa16.6■□□□□ 0.25
PRAME-214ENST00000543184 NEUROD6Q96NK8 337 aa16.6■□□□□ 0.25
PRAME-214ENST00000543184 KINO60870 393 aaKnown RBP16.59■□□□□ 0.25
PRAME-214ENST00000543184 KIF20AO95235 890 aa16.59■□□□□ 0.25
PRAME-214ENST00000543184 SLFN14P0C7P3 912 aa16.59■□□□□ 0.25
PRAME-214ENST00000543184 CCDC73Q6ZRK6 1079 aa16.59■□□□□ 0.25
PRAME-214ENST00000543184 CFAP45Q9UL16 551 aa16.59■□□□□ 0.25
PRAME-214ENST00000543184 SMC2O95347 1197 aa16.59■□□□□ 0.25
PRAME-214ENST00000543184 SNRPA1P09661 255 aaKnown RBP16.59■□□□□ 0.25
PRAME-214ENST00000543184 ERCC6LQ2NKX8 1250 aa16.59■□□□□ 0.25
PRAME-214ENST00000543184 DPCR1Q3MIW9 517 aa16.59■□□□□ 0.25
PRAME-214ENST00000543184 NBPF11Q86T75 865 aa16.59■□□□□ 0.25
PRAME-214ENST00000543184 SDF4Q9BRK5 362 aa16.59■□□□□ 0.25
PRAME-214ENST00000543184 LOC102724428A0A0B4J2F2 783 aa16.58■□□□□ 0.25
PRAME-214ENST00000543184 GOLIM4O00461 696 aa16.58■□□□□ 0.25
PRAME-214ENST00000543184 SIK1P57059 783 aa16.58■□□□□ 0.25
PRAME-214ENST00000543184 ITPK1Q13572 414 aa16.58■□□□□ 0.25
PRAME-214ENST00000543184 TNNI3KQ59H18 835 aa16.58■□□□□ 0.25
PRAME-214ENST00000543184 NYAP1Q6ZVC0 841 aa16.58■□□□□ 0.25
PRAME-214ENST00000543184 CCAR2Q8N163 923 aaKnown RBP16.58■□□□□ 0.25
PRAME-214ENST00000543184 FPGT-TNNI3KV9GXZ4 949 aa16.58■□□□□ 0.25
PRAME-214ENST00000543184 PALLDQ8WX93 1383 aa16.58■□□□□ 0.24
PRAME-214ENST00000543184 NEURL1BA8MQ27 555 aa16.58■□□□□ 0.24
PRAME-214ENST00000543184 HOXB7P09629 217 aa16.58■□□□□ 0.24
PRAME-214ENST00000543184 HSP90AB3PQ58FF7 597 aa16.58■□□□□ 0.24
PRAME-214ENST00000543184 SYT10Q6XYQ8 523 aa16.58■□□□□ 0.24
PRAME-214ENST00000543184 TIMM10P62072 90 aa16.57■□□□□ 0.24
PRAME-214ENST00000543184 TMC6Q7Z403 805 aa16.57■□□□□ 0.24
PRAME-214ENST00000543184 TMX1Q9H3N1 280 aa16.57■□□□□ 0.24
PRAME-214ENST00000543184 HMG20BQ9P0W2 317 aa16.57■□□□□ 0.24
PRAME-214ENST00000543184 SCN11AQ9UI33 1791 aa16.57■□□□□ 0.24
PRAME-214ENST00000543184 NDUFA8P51970 172 aa16.57■□□□□ 0.24
PRAME-214ENST00000543184 HAND2P61296 217 aa16.57■□□□□ 0.24
PRAME-214ENST00000543184 GCKRQ14397 625 aa16.57■□□□□ 0.24
PRAME-214ENST00000543184 ZNF446Q9NWS9 450 aa16.57■□□□□ 0.24
PRAME-214ENST00000543184 IFNKQ9P0W0 207 aa16.57■□□□□ 0.24
PRAME-214ENST00000543184 PCDHA7Q9UN72 937 aa16.57■□□□□ 0.24
PRAME-214ENST00000543184 DOT1LQ8TEK3 1739 aa16.57■□□□□ 0.24
PRAME-214ENST00000543184 NBPF26B4DH59 902 aa16.56■□□□□ 0.24
PRAME-214ENST00000543184 PTPN12Q05209 780 aaKnown RBP16.56■□□□□ 0.24
PRAME-214ENST00000543184 NBPF14Q5TI25 921 aa16.56■□□□□ 0.24
PRAME-214ENST00000543184 USPL1Q5W0Q7 1092 aa16.56■□□□□ 0.24
PRAME-214ENST00000543184 NBPF10Q6P3W6 841 aaKnown RBP16.56■□□□□ 0.24
PRAME-214ENST00000543184 NBPF15Q8N660 670 aa16.56■□□□□ 0.24
PRAME-214ENST00000543184 XPO4Q9C0E2 1151 aaKnown RBP16.56■□□□□ 0.24
PRAME-214ENST00000543184 SNRKQ9NRH2 765 aa16.56■□□□□ 0.24
PRAME-214ENST00000543184 RCOR1Q9UKL0 485 aa16.56■□□□□ 0.24
PRAME-214ENST00000543184 ZBTB1Q9Y2K1 713 aa16.56■□□□□ 0.24
PRAME-214ENST00000543184 CLIC4Q9Y696 253 aa16.56■□□□□ 0.24
PRAME-214ENST00000543184 MAPK8IP2Q13387 824 aaPredicted RBP16.56■□□□□ 0.24
PRAME-214ENST00000543184 MCMDC2Q4G0Z9 681 aa16.56■□□□□ 0.24
PRAME-214ENST00000543184 HSP90AA4PQ58FG1 418 aa16.56■□□□□ 0.24
PRAME-214ENST00000543184 ENGASEQ8NFI3 743 aa16.56■□□□□ 0.24
PRAME-214ENST00000543184 MRFAP1L1Q96HT8 127 aa16.56■□□□□ 0.24
PRAME-214ENST00000543184 TRERF1Q96PN7 1200 aa16.56■□□□□ 0.24
PRAME-214ENST00000543184 HEG1Q9ULI3 1381 aa16.56■□□□□ 0.24
PRAME-214ENST00000543184 APBA3O96018 575 aa16.55■□□□□ 0.24
PRAME-214ENST00000543184 E4F1Q66K89 784 aaPredicted RBP16.55■□□□□ 0.24
PRAME-214ENST00000543184 EPC1Q9H2F5 836 aa16.55■□□□□ 0.24
PRAME-214ENST00000543184 ZSCAN16Q9H4T2 348 aaPredicted RBP16.55■□□□□ 0.24
PRAME-214ENST00000543184 DDX21Q9NR30 783 aaKnown RBP eCLIP16.55■□□□□ 0.24
PRAME-214ENST00000543184 MORC2Q9Y6X9 1032 aaPredicted RBP16.55■□□□□ 0.24
PRAME-214ENST00000543184 SMARCC2Q8TAQ2 1214 aa16.55■□□□□ 0.24
PRAME-214ENST00000543184 ZBTB3Q9H5J0 574 aa16.55■□□□□ 0.24
PRAME-214ENST00000543184 DDX58O95786 925 aaKnown RBP16.55■□□□□ 0.24
PRAME-214ENST00000543184 TSGA10IPQ3SY00 556 aa16.55■□□□□ 0.24
PRAME-214ENST00000543184 ARMCX5Q6P1M9 558 aa16.55■□□□□ 0.24
PRAME-214ENST00000543184 SARM1Q6SZW1 724 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms