RNA–Protein interactions for RNA: ENST00000543025.5

KDM2B-216, Transcript of lysine demethylase 2B, humanhuman

TSL 1 (best)

Gene KDM2B, Length 2,522 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-216ENST00000543025 SARM1Q6SZW1 724 aa19.43■□□□□ 0.7
KDM2B-216ENST00000543025 CCDC73Q6ZRK6 1079 aa19.43■□□□□ 0.7
KDM2B-216ENST00000543025 SEPT12Q8IYM1 358 aa19.43■□□□□ 0.7
KDM2B-216ENST00000543025 NBPF15Q8N660 670 aa19.43■□□□□ 0.7
KDM2B-216ENST00000543025 ZNF274Q96GC6 653 aaPredicted RBP19.43■□□□□ 0.7
KDM2B-216ENST00000543025 PAPPAQ13219 1627 aa19.43■□□□□ 0.7
KDM2B-216ENST00000543025 MAST3O60307 1309 aa19.43■□□□□ 0.7
KDM2B-216ENST00000543025 ERVV-2B6SEH9 535 aa19.43■□□□□ 0.7
KDM2B-216ENST00000543025 IFIT1P09914 478 aaKnown RBP19.43■□□□□ 0.7
KDM2B-216ENST00000543025 FOSBP53539 338 aa19.43■□□□□ 0.7
KDM2B-216ENST00000543025 USP28Q96RU2 1077 aa19.43■□□□□ 0.7
KDM2B-216ENST00000543025 FTOQ9C0B1 505 aaKnown RBP eCLIP19.43■□□□□ 0.72e-7■■■■■ 42.9
KDM2B-216ENST00000543025 RNF113AO15541 343 aaKnown RBP19.42■□□□□ 0.7
KDM2B-216ENST00000543025 RBM6P78332 1123 aaKnown RBP19.42■□□□□ 0.7
KDM2B-216ENST00000543025 SPEF2Q9C093 1822 aa19.42■□□□□ 0.7
KDM2B-216ENST00000543025 EYA2O00167 538 aa19.42■□□□□ 0.7
KDM2B-216ENST00000543025 PDIA3P30101 505 aaKnown RBP19.42■□□□□ 0.7
KDM2B-216ENST00000543025 SNW1Q13573 536 aaKnown RBP19.42■□□□□ 0.7
KDM2B-216ENST00000543025 GOLPH3LQ9H4A5 285 aa19.42■□□□□ 0.7
KDM2B-216ENST00000543025 KAT6BQ8WYB5 2073 aa19.41■□□□□ 0.7
KDM2B-216ENST00000543025 FAM177BA6PVY3 158 aa19.41■□□□□ 0.7
KDM2B-216ENST00000543025 KINO60870 393 aaKnown RBP19.41■□□□□ 0.7
KDM2B-216ENST00000543025 C11orf57Q6ZUT1 292 aaPredicted RBP19.41■□□□□ 0.7
KDM2B-216ENST00000543025 NCOA5Q9HCD5 579 aaKnown RBP19.41■□□□□ 0.7
KDM2B-216ENST00000543025 NAP1L2Q9ULW6 460 aaPredicted RBP19.41■□□□□ 0.7
KDM2B-216ENST00000543025 TJP1Q07157 1748 aa19.41■□□□□ 0.7
KDM2B-216ENST00000543025 NUP188Q5SRE5 1749 aa19.41■□□□□ 0.7
KDM2B-216ENST00000543025 A0A1B0GUL7 405 aa19.41■□□□□ 0.7
KDM2B-216ENST00000543025 LRRC24Q50LG9 513 aa19.41■□□□□ 0.7
KDM2B-216ENST00000543025 TTLL7Q6ZT98 887 aa19.41■□□□□ 0.7
KDM2B-216ENST00000543025 ATG3Q9NT62 314 aa19.41■□□□□ 0.7
KDM2B-216ENST00000543025 A0A0G2JLW4 131 aa19.4■□□□□ 0.7
KDM2B-216ENST00000543025 CTIFO43310 598 aaKnown RBP19.4■□□□□ 0.7
KDM2B-216ENST00000543025 CIAO1O76071 339 aa19.4■□□□□ 0.7
KDM2B-216ENST00000543025 FAM160A1Q05DH4 1040 aa19.4■□□□□ 0.7
KDM2B-216ENST00000543025 CCDC191Q8NCU4 936 aa19.4■□□□□ 0.7
KDM2B-216ENST00000543025 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.4■□□□□ 0.7
KDM2B-216ENST00000543025 MRFAP1L1Q96HT8 127 aa19.4■□□□□ 0.7
KDM2B-216ENST00000543025 CARMIL3Q8ND23 1372 aa19.4■□□□□ 0.7
KDM2B-216ENST00000543025 FBXL16Q8N461 479 aa19.4■□□□□ 0.7
KDM2B-216ENST00000543025 ENGASEQ8NFI3 743 aa19.4■□□□□ 0.7
KDM2B-216ENST00000543025 UBR2Q8IWV8 1755 aa19.39■□□□□ 0.69
KDM2B-216ENST00000543025 ME1P48163 572 aa19.39■□□□□ 0.69
KDM2B-216ENST00000543025 CACTINQ8WUQ7 758 aaKnown RBP19.39■□□□□ 0.69
KDM2B-216ENST00000543025 C16orf45Q96MC5 204 aaPredicted RBP19.39■□□□□ 0.69
KDM2B-216ENST00000543025 BECN2A8MW95 431 aa19.39■□□□□ 0.69
KDM2B-216ENST00000543025 LRRFIP1Q32MZ4 808 aaKnown RBP19.39■□□□□ 0.69
KDM2B-216ENST00000543025 CCDC144BQ3MJ40 725 aa19.39■□□□□ 0.69
KDM2B-216ENST00000543025 CHST3Q7LGC8 479 aa19.39■□□□□ 0.69
KDM2B-216ENST00000543025 CCDC144CPQ8IYA2 1237 aa19.39■□□□□ 0.69
KDM2B-216ENST00000543025 ZNF594Q96JF6 807 aaPredicted RBP19.39■□□□□ 0.69
KDM2B-216ENST00000543025 ANO10Q9NW15 660 aa19.39■□□□□ 0.69
KDM2B-216ENST00000543025 M0R2C6 588 aa19.38■□□□□ 0.69
KDM2B-216ENST00000543025 POTEAQ6S8J7 498 aa19.38■□□□□ 0.69
KDM2B-216ENST00000543025 SMAP1Q8IYB5 467 aaPredicted RBP19.38■□□□□ 0.69
KDM2B-216ENST00000543025 EVCP57679 992 aa19.38■□□□□ 0.69
KDM2B-216ENST00000543025 GUCY1B3Q02153 619 aa19.38■□□□□ 0.69
KDM2B-216ENST00000543025 FSIP1Q8NA03 581 aa19.38■□□□□ 0.69
KDM2B-216ENST00000543025 NEMFO60524 1076 aa19.37■□□□□ 0.69
KDM2B-216ENST00000543025 TMOD3Q9NYL9 352 aa19.37■□□□□ 0.69
KDM2B-216ENST00000543025 TNNT1P13805 278 aa19.36■□□□□ 0.69
KDM2B-216ENST00000543025 RXRBP28702 533 aa19.36■□□□□ 0.69
KDM2B-216ENST00000543025 FAM182BQ5T319 152 aa19.36■□□□□ 0.69
KDM2B-216ENST00000543025 LRRC8AQ8IWT6 810 aa19.36■□□□□ 0.69
KDM2B-216ENST00000543025 ANKRD7Q92527 254 aa19.36■□□□□ 0.69
KDM2B-216ENST00000543025 PKNOX2Q96KN3 472 aa19.36■□□□□ 0.69
KDM2B-216ENST00000543025 ZBTB3Q9H5J0 574 aa19.36■□□□□ 0.69
KDM2B-216ENST00000543025 CTNNA3Q9UI47 895 aa19.36■□□□□ 0.69
KDM2B-216ENST00000543025 BCL9O00512 1426 aa19.36■□□□□ 0.69
KDM2B-216ENST00000543025 SBF2Q86WG5 1849 aa19.36■□□□□ 0.69
KDM2B-216ENST00000543025 SMTNL1A8MU46 457 aa19.36■□□□□ 0.69
KDM2B-216ENST00000543025 PPFIA3O75145 1194 aa19.36■□□□□ 0.69
KDM2B-216ENST00000543025 TTLL5Q6EMB2 1281 aa19.36■□□□□ 0.69
KDM2B-216ENST00000543025 PDCL2Q8N4E4 241 aa19.36■□□□□ 0.69
KDM2B-216ENST00000543025 OSBP2Q969R2 916 aa19.36■□□□□ 0.69
KDM2B-216ENST00000543025 ACSBG1Q96GR2 724 aa19.36■□□□□ 0.69
KDM2B-216ENST00000543025 A1BGP04217 495 aa19.35■□□□□ 0.69
KDM2B-216ENST00000543025 FDPSP14324 419 aaKnown RBP19.35■□□□□ 0.69
KDM2B-216ENST00000543025 FKBP4Q02790 459 aaKnown RBP eCLIP19.35■□□□□ 0.69
KDM2B-216ENST00000543025 CCDC158Q5M9N0 1113 aa19.35■□□□□ 0.69
KDM2B-216ENST00000543025 DHX40Q8IX18 779 aaKnown RBP19.35■□□□□ 0.69
KDM2B-216ENST00000543025 PIGBQ92521 554 aa19.35■□□□□ 0.69
KDM2B-216ENST00000543025 MRPS27Q92552 414 aaKnown RBP19.35■□□□□ 0.69
KDM2B-216ENST00000543025 RTEL1Q9NZ71 1219 aa19.35■□□□□ 0.69
KDM2B-216ENST00000543025 CEP126Q9P2H0 1117 aa19.35■□□□□ 0.69
KDM2B-216ENST00000543025 PAXBP1Q9Y5B6 917 aa19.35■□□□□ 0.69
KDM2B-216ENST00000543025 NHSQ6T4R5 1651 aa19.35■□□□□ 0.69
KDM2B-216ENST00000543025 PPP4R3BQ5MIZ7 849 aa19.35■□□□□ 0.69
KDM2B-216ENST00000543025 ADALQ6DHV7 355 aa19.35■□□□□ 0.69
KDM2B-216ENST00000543025 CEP57L1Q8IYX8 460 aa19.35■□□□□ 0.69
KDM2B-216ENST00000543025 SYTL4Q96C24 671 aaPredicted RBP19.35■□□□□ 0.69
KDM2B-216ENST00000543025 PUS3Q9BZE2 481 aaKnown RBP19.35■□□□□ 0.69
KDM2B-216ENST00000543025 TPD52L1Q16890 204 aaPredicted RBP19.34■□□□□ 0.69
KDM2B-216ENST00000543025 IMMTQ16891 758 aaKnown RBP19.34■□□□□ 0.69
KDM2B-216ENST00000543025 NAT10Q9H0A0 1025 aaKnown RBP19.34■□□□□ 0.69
KDM2B-216ENST00000543025 PCDHA7Q9UN72 937 aa19.34■□□□□ 0.69
KDM2B-216ENST00000543025 KCPQ6ZWJ8 1503 aa19.34■□□□□ 0.69
KDM2B-216ENST00000543025 ZFYP08048 801 aaPredicted RBP19.34■□□□□ 0.69
KDM2B-216ENST00000543025 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.33■□□□□ 0.69
KDM2B-216ENST00000543025 A0A1W2PQ27 194 aa19.33■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms