RNA–Protein interactions for RNA: ENST00000541990.5

THBS3-211, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 2,928 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-211ENST00000541990 ZNF446Q9NWS9 450 aa10.72□□□□□ -0.69
THBS3-211ENST00000541990 RFX5P48382 616 aaPredicted RBP10.72□□□□□ -0.69
THBS3-211ENST00000541990 SYCP1Q15431 976 aa10.72□□□□□ -0.69
THBS3-211ENST00000541990 SPATA32Q96LK8 384 aa10.72□□□□□ -0.69
THBS3-211ENST00000541990 TRERF1Q96PN7 1200 aa10.72□□□□□ -0.69
THBS3-211ENST00000541990 ISCA1Q9BUE6 129 aa10.72□□□□□ -0.69
THBS3-211ENST00000541990 CHMP4AQ9BY43 222 aa10.72□□□□□ -0.69
THBS3-211ENST00000541990 CLSTN2Q9H4D0 955 aa10.72□□□□□ -0.69
THBS3-211ENST00000541990 CYP46A1Q9Y6A2 500 aa10.72□□□□□ -0.69
THBS3-211ENST00000541990 LRRC8AQ8IWT6 810 aa10.71□□□□□ -0.69
THBS3-211ENST00000541990 FBXW7Q969H0 707 aa10.71□□□□□ -0.69
THBS3-211ENST00000541990 FTOQ9C0B1 505 aaKnown RBP eCLIP10.71□□□□□ -0.69
THBS3-211ENST00000541990 IRS4O14654 1257 aaPredicted RBP10.71□□□□□ -0.69
THBS3-211ENST00000541990 JAK2O60674 1132 aa10.71□□□□□ -0.69
THBS3-211ENST00000541990 CEBPZQ03701 1054 aaKnown RBP10.71□□□□□ -0.69
THBS3-211ENST00000541990 FILIP1Q7Z7B0 1213 aa10.71□□□□□ -0.69
THBS3-211ENST00000541990 BICD2Q8TD16 824 aa10.71□□□□□ -0.69
THBS3-211ENST00000541990 DBNDD2Q9BQY9 259 aa10.71□□□□□ -0.69
THBS3-211ENST00000541990 TEX13AQ9BXU3 409 aaPredicted RBP10.71□□□□□ -0.69
THBS3-211ENST00000541990 SNRKQ9NRH2 765 aa10.71□□□□□ -0.69
THBS3-211ENST00000541990 RBM8AQ9Y5S9 174 aaKnown RBP10.71□□□□□ -0.69
THBS3-211ENST00000541990 EPB41L2O43491 1005 aaKnown RBP10.71□□□□□ -0.7
THBS3-211ENST00000541990 CAMTA2O94983 1202 aa10.71□□□□□ -0.7
THBS3-211ENST00000541990 IFIT2P09913 472 aaKnown RBP10.71□□□□□ -0.7
THBS3-211ENST00000541990 FOSBP53539 338 aa10.71□□□□□ -0.7
THBS3-211ENST00000541990 TBC1D9BQ66K14 1250 aa10.71□□□□□ -0.7
THBS3-211ENST00000541990 KRT222Q8N1A0 295 aa10.71□□□□□ -0.7
THBS3-211ENST00000541990 CCDC191Q8NCU4 936 aa10.71□□□□□ -0.7
THBS3-211ENST00000541990 KIF1BPQ96EK5 621 aa10.71□□□□□ -0.7
THBS3-211ENST00000541990 PAXBP1Q9Y5B6 917 aa10.71□□□□□ -0.7
THBS3-211ENST00000541990 MYH14Q7Z406 1995 aaKnown RBP10.7□□□□□ -0.7
THBS3-211ENST00000541990 IL6STP40189 918 aaPredicted RBP10.7□□□□□ -0.7
THBS3-211ENST00000541990 NECTIN1Q15223 517 aa10.7□□□□□ -0.7
THBS3-211ENST00000541990 CREB3L3Q68CJ9 461 aa10.7□□□□□ -0.7
THBS3-211ENST00000541990 PI16Q6UXB8 463 aa10.7□□□□□ -0.7
THBS3-211ENST00000541990 RBM43Q6ZSC3 357 aaKnown RBP10.7□□□□□ -0.7
THBS3-211ENST00000541990 CLASRPQ8N2M8 674 aaKnown RBP10.7□□□□□ -0.7
THBS3-211ENST00000541990 ZNF397Q8NF99 534 aaPredicted RBP10.7□□□□□ -0.7
THBS3-211ENST00000541990 GOLGA6L4A6NEF3 574 aa10.7□□□□□ -0.7
THBS3-211ENST00000541990 TAF5LO75529 589 aa10.7□□□□□ -0.7
THBS3-211ENST00000541990 CCZ1BP86790 482 aa10.7□□□□□ -0.7
THBS3-211ENST00000541990 CCZ1P86791 482 aaPredicted RBP10.7□□□□□ -0.7
THBS3-211ENST00000541990 IQCB1Q15051 598 aa10.7□□□□□ -0.7
THBS3-211ENST00000541990 NYAP1Q6ZVC0 841 aa10.7□□□□□ -0.7
THBS3-211ENST00000541990 PROM2Q8N271 834 aa10.7□□□□□ -0.7
THBS3-211ENST00000541990 ARHGEF1Q92888 912 aaKnown RBP10.7□□□□□ -0.7
THBS3-211ENST00000541990 SH2B1Q9NRF2 756 aaPredicted RBP10.7□□□□□ -0.7
THBS3-211ENST00000541990 UTYO14607 1347 aa10.7□□□□□ -0.7
THBS3-211ENST00000541990 ELP1O95163 1332 aa10.7□□□□□ -0.7
THBS3-211ENST00000541990 PPFIA3O75145 1194 aa10.69□□□□□ -0.7
THBS3-211ENST00000541990 SKILP12757 684 aa10.69□□□□□ -0.7
THBS3-211ENST00000541990 ADORA1P30542 326 aa10.69□□□□□ -0.7
THBS3-211ENST00000541990 TAF7LQ5H9L4 462 aa10.69□□□□□ -0.7
THBS3-211ENST00000541990 GTF3C6Q969F1 213 aa10.69□□□□□ -0.7
THBS3-211ENST00000541990 DNAJC2Q99543 621 aaKnown RBP10.69□□□□□ -0.7
THBS3-211ENST00000541990 CCDC171Q6TFL3 1326 aa10.69□□□□□ -0.7
THBS3-211ENST00000541990 CCDC69A6NI79 296 aa10.69□□□□□ -0.7
THBS3-211ENST00000541990 ITGA6P23229 1130 aa10.69□□□□□ -0.7
THBS3-211ENST00000541990 DBNLQ9UJU6 430 aaKnown RBP10.69□□□□□ -0.7
THBS3-211ENST00000541990 SLC27A2O14975 620 aa10.68□□□□□ -0.7
THBS3-211ENST00000541990 NMIQ13287 307 aaPredicted RBP10.68□□□□□ -0.7
THBS3-211ENST00000541990 MTX1Q13505 466 aa10.68□□□□□ -0.7
THBS3-211ENST00000541990 TOB2Q14106 344 aaPredicted RBP10.68□□□□□ -0.7
THBS3-211ENST00000541990 PTPN14Q15678 1187 aa10.68□□□□□ -0.7
THBS3-211ENST00000541990 ERFEQ4G0M1 354 aa10.68□□□□□ -0.7
THBS3-211ENST00000541990 HSP90AB3PQ58FF7 597 aa10.68□□□□□ -0.7
THBS3-211ENST00000541990 ATG9AQ7Z3C6 839 aa10.68□□□□□ -0.7
THBS3-211ENST00000541990 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.68□□□□□ -0.7
THBS3-211ENST00000541990 ZSCAN31Q96LW9 406 aaPredicted RBP10.68□□□□□ -0.7
THBS3-211ENST00000541990 DDX19AQ9NUU7 478 aaKnown RBP10.68□□□□□ -0.7
THBS3-211ENST00000541990 FAM53CQ9NYF3 392 aa10.68□□□□□ -0.7
THBS3-211ENST00000541990 WWC3Q9ULE0 1092 aa10.68□□□□□ -0.7
THBS3-211ENST00000541990 PXDNLA1KZ92 1463 aa10.68□□□□□ -0.7
THBS3-211ENST00000541990 PDE4CQ08493 712 aa10.68□□□□□ -0.7
THBS3-211ENST00000541990 CCDC57Q2TAC2 916 aa10.68□□□□□ -0.7
THBS3-211ENST00000541990 ZBTB38Q8NAP3 1195 aaPredicted RBP10.68□□□□□ -0.7
THBS3-211ENST00000541990 TTLL11Q8NHH1 800 aa10.68□□□□□ -0.7
THBS3-211ENST00000541990 IQSEC3Q9UPP2 1182 aaPredicted RBP10.68□□□□□ -0.7
THBS3-211ENST00000541990 A0A0D9SFI3 127 aa10.68□□□□□ -0.7
THBS3-211ENST00000541990 APBA3O96018 575 aa10.68□□□□□ -0.7
THBS3-211ENST00000541990 CAPN2P17655 700 aa10.68□□□□□ -0.7
THBS3-211ENST00000541990 ERCC6LQ2NKX8 1250 aa10.68□□□□□ -0.7
THBS3-211ENST00000541990 KCNB2Q92953 911 aa10.68□□□□□ -0.7
THBS3-211ENST00000541990 GOLPH3LQ9H4A5 285 aa10.68□□□□□ -0.7
THBS3-211ENST00000541990 COL15A1P39059 1388 aa10.67□□□□□ -0.7
THBS3-211ENST00000541990 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.67□□□□□ -0.7
THBS3-211ENST00000541990 GLRX3O76003 335 aaKnown RBP10.67□□□□□ -0.7
THBS3-211ENST00000541990 MSL1Q68DK7 614 aa10.67□□□□□ -0.7
THBS3-211ENST00000541990 DDX46Q7L014 1031 aaKnown RBP10.67□□□□□ -0.7
THBS3-211ENST00000541990 SMARCC1Q92922 1105 aaPredicted RBP10.67□□□□□ -0.7
THBS3-211ENST00000541990 TM6SF1Q9BZW5 370 aa10.67□□□□□ -0.7
THBS3-211ENST00000541990 RABL6Q3YEC7 729 aaPredicted RBP10.67□□□□□ -0.7
THBS3-211ENST00000541990 TAF3Q5VWG9 929 aa10.67□□□□□ -0.7
THBS3-211ENST00000541990 ZNF34Q8IZ26 560 aa10.67□□□□□ -0.7
THBS3-211ENST00000541990 CACNA1FO60840 1977 aa10.67□□□□□ -0.7
THBS3-211ENST00000541990 ATRNO75882 1429 aa10.66□□□□□ -0.7
THBS3-211ENST00000541990 ONECUT3O60422 494 aaPredicted RBP10.66□□□□□ -0.7
THBS3-211ENST00000541990 TNNI3KQ59H18 835 aa10.66□□□□□ -0.7
THBS3-211ENST00000541990 LDHAL6AQ6ZMR3 332 aa10.66□□□□□ -0.7
THBS3-211ENST00000541990 ZNF589Q86UQ0 364 aaPredicted RBP10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms