RNA–Protein interactions for RNA: ENST00000541841.1

CIT-211, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-211ENST00000541841 ZFP64Q9NPA5 681 aa8.9□□□□□ -0.98
CIT-211ENST00000541841 EGFL7Q9UHF1 273 aa8.9□□□□□ -0.98
CIT-211ENST00000541841 BRPF3Q9ULD4 1205 aa8.9□□□□□ -0.98
CIT-211ENST00000541841 ARHGAP4P98171 946 aa8.89□□□□□ -0.99
CIT-211ENST00000541841 IKBKEQ14164 716 aa8.89□□□□□ -0.99
CIT-211ENST00000541841 B4GALNT3Q6L9W6 998 aa8.89□□□□□ -0.99
CIT-211ENST00000541841 UTP4Q969X6 686 aaKnown RBP8.89□□□□□ -0.99
CIT-211ENST00000541841 C19orf57Q0VDD7 668 aa8.88□□□□□ -0.99
CIT-211ENST00000541841 ORC1Q13415 861 aa8.88□□□□□ -0.99
CIT-211ENST00000541841 BHLHE41Q9C0J9 482 aaPredicted RBP8.88□□□□□ -0.99
CIT-211ENST00000541841 OSGEPQ9NPF4 335 aa8.88□□□□□ -0.99
CIT-211ENST00000541841 RAXQ9Y2V3 346 aa8.88□□□□□ -0.99
CIT-211ENST00000541841 HYAL3O43820 417 aaPredicted RBP8.87□□□□□ -0.99
CIT-211ENST00000541841 PREPP48147 710 aa8.87□□□□□ -0.99
CIT-211ENST00000541841 TXNDC2Q86VQ3 553 aa8.87□□□□□ -0.99
CIT-211ENST00000541841 WNT8BQ93098 351 aa8.87□□□□□ -0.99
CIT-211ENST00000541841 FAM46AQ96IP4 442 aaKnown RBP8.87□□□□□ -0.99
CIT-211ENST00000541841 RUSC1Q9BVN2 902 aa8.87□□□□□ -0.99
CIT-211ENST00000541841 USP26Q9BXU7 913 aa8.87□□□□□ -0.99
CIT-211ENST00000541841 CEP41Q9BYV8 373 aa8.87□□□□□ -0.99
CIT-211ENST00000541841 STOML1Q9UBI4 398 aa8.87□□□□□ -0.99
CIT-211ENST00000541841 A0A1W2PP55 124 aa8.86□□□□□ -0.99
CIT-211ENST00000541841 DHX15O43143 795 aaKnown RBP8.86□□□□□ -0.99
CIT-211ENST00000541841 DLGAP3O95886 979 aa8.86□□□□□ -0.99
CIT-211ENST00000541841 LRP8Q14114 963 aa8.86□□□□□ -0.99
CIT-211ENST00000541841 SPRED3Q2MJR0 410 aa8.86□□□□□ -0.99
CIT-211ENST00000541841 HMX2A2RU54 273 aa8.85□□□□□ -0.99
CIT-211ENST00000541841 ESRRAP11474 423 aaPredicted RBP8.85□□□□□ -0.99
CIT-211ENST00000541841 ARL4DP49703 201 aa8.85□□□□□ -0.99
CIT-211ENST00000541841 TRIM42Q8IWZ5 723 aa8.85□□□□□ -0.99
CIT-211ENST00000541841 RNF112Q9ULX5 631 aa8.85□□□□□ -0.99
CIT-211ENST00000541841 NDUFB5O43674 189 aa8.84□□□□□ -0.99
CIT-211ENST00000541841 SSTR4P31391 388 aa8.84□□□□□ -0.99
CIT-211ENST00000541841 GRIA4P48058 902 aa8.84□□□□□ -0.99
CIT-211ENST00000541841 MYRFLQ96LU7 910 aa8.84□□□□□ -0.99
CIT-211ENST00000541841 RNF208Q9H0X6 261 aa8.84□□□□□ -0.99
CIT-211ENST00000541841 C7orf69Q9H7B7 122 aa8.84□□□□□ -0.99
CIT-211ENST00000541841 LOC100289279A0A1B0GTE1 492 aa8.83□□□□□ -1
CIT-211ENST00000541841 SART1O43290 800 aaKnown RBP8.83□□□□□ -1
CIT-211ENST00000541841 BMP3P12645 472 aa8.83□□□□□ -1
CIT-211ENST00000541841 GSTM4Q03013 218 aa8.83□□□□□ -1
CIT-211ENST00000541841 FDX2Q6P4F2 183 aa8.83□□□□□ -1
CIT-211ENST00000541841 GALNT12Q8IXK2 581 aa8.83□□□□□ -1
CIT-211ENST00000541841 TCF12Q99081 682 aa8.83□□□□□ -1
CIT-211ENST00000541841 KCNF1Q9H3M0 494 aa8.83□□□□□ -1
CIT-211ENST00000541841 LIN7BQ9HAP6 207 aa8.83□□□□□ -1
CIT-211ENST00000541841 GPR182O15218 404 aa8.82□□□□□ -1
CIT-211ENST00000541841 TGFB1P01137 390 aa8.82□□□□□ -1
CIT-211ENST00000541841 IGLV1-40P01703 118 aa8.82□□□□□ -1
CIT-211ENST00000541841 NBPF11Q86T75 865 aa8.82□□□□□ -1
CIT-211ENST00000541841 CCNJLQ8IV13 435 aa8.82□□□□□ -1
CIT-211ENST00000541841 TMC1Q8TDI8 760 aa8.82□□□□□ -1
CIT-211ENST00000541841 NPHS2Q9NP85 383 aa8.82□□□□□ -1
CIT-211ENST00000541841 A0A096LPE4 126 aa8.81□□□□□ -1
CIT-211ENST00000541841 A0A1W2PPZ6 126 aa8.81□□□□□ -1
CIT-211ENST00000541841 ZNF423Q2M1K9 1284 aa8.81□□□□□ -1
CIT-211ENST00000541841 UVSSAQ2YD98 709 aa8.81□□□□□ -1
CIT-211ENST00000541841 ANKRD34AQ69YU3 496 aa8.81□□□□□ -1
CIT-211ENST00000541841 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.81□□□□□ -1
CIT-211ENST00000541841 FAM20CQ8IXL6 584 aa8.81□□□□□ -1
CIT-211ENST00000541841 FAM129BQ96TA1 746 aa8.81□□□□□ -1
CIT-211ENST00000541841 NIF3L1Q9GZT8 377 aa8.81□□□□□ -1
CIT-211ENST00000541841 IGHA2P01877 340 aa8.8□□□□□ -1
CIT-211ENST00000541841 CTSBP07858 339 aa8.8□□□□□ -1
CIT-211ENST00000541841 DRD2P14416 443 aa8.8□□□□□ -1
CIT-211ENST00000541841 PCDH1Q08174 1060 aa8.8□□□□□ -1
CIT-211ENST00000541841 SGO2Q562F6 1265 aa8.8□□□□□ -1
CIT-211ENST00000541841 BEND4Q6ZU67 534 aa8.8□□□□□ -1
CIT-211ENST00000541841 C12orf50Q8NA57 414 aaPredicted RBP8.8□□□□□ -1
CIT-211ENST00000541841 MED26O95402 600 aa8.79□□□□□ -1
CIT-211ENST00000541841 NFIAQ12857 509 aa8.79□□□□□ -1
CIT-211ENST00000541841 NUTM2GQ5VZR2 741 aa8.79□□□□□ -1
CIT-211ENST00000541841 TMPRSS13Q9BYE2 586 aa8.79□□□□□ -1
CIT-211ENST00000541841 EIF1AYO14602 144 aaKnown RBP8.78□□□□□ -1
CIT-211ENST00000541841 GAS2O43903 313 aaKnown RBP8.78□□□□□ -1
CIT-211ENST00000541841 CPNE3O75131 537 aaKnown RBP8.78□□□□□ -1
CIT-211ENST00000541841 ECEL1O95672 775 aa8.78□□□□□ -1
CIT-211ENST00000541841 ZDHHC13Q8IUH4 622 aa8.78□□□□□ -1
CIT-211ENST00000541841 EHD4Q9H223 541 aa8.78□□□□□ -1
CIT-211ENST00000541841 CLEC4MQ9H2X3 399 aaPredicted RBP8.78□□□□□ -1
CIT-211ENST00000541841 SOX17Q9H6I2 414 aaPredicted RBP8.78□□□□□ -1
CIT-211ENST00000541841 MEGF11A6BM72 1044 aa8.77□□□□□ -1.01
CIT-211ENST00000541841 PDE3BQ13370 1112 aa8.77□□□□□ -1.01
CIT-211ENST00000541841 KIAA0319Q5VV43 1072 aa8.77□□□□□ -1.01
CIT-211ENST00000541841 CCER1Q8TC90 406 aaPredicted RBP8.77□□□□□ -1.01
CIT-211ENST00000541841 NRSN2Q9GZP1 204 aa8.77□□□□□ -1.01
CIT-211ENST00000541841 PCMTD2Q9NV79 361 aa8.77□□□□□ -1.01
CIT-211ENST00000541841 SOWAHDA6NJG2 315 aa8.76□□□□□ -1.01
CIT-211ENST00000541841 MAP4P27816 1152 aaKnown RBP8.76□□□□□ -1.01
CIT-211ENST00000541841 RXRBP28702 533 aa8.76□□□□□ -1.01
CIT-211ENST00000541841 RNF43Q68DV7 783 aa8.76□□□□□ -1.01
CIT-211ENST00000541841 CCDC74AQ96AQ1 378 aa8.76□□□□□ -1.01
CIT-211ENST00000541841 FAM83CQ9BQN1 747 aa8.76□□□□□ -1.01
CIT-211ENST00000541841 GSC2O15499 205 aa8.75□□□□□ -1.01
CIT-211ENST00000541841 TIAF1O95411 115 aa8.75□□□□□ -1.01
CIT-211ENST00000541841 MAOBP27338 520 aa8.75□□□□□ -1.01
CIT-211ENST00000541841 CLEC10AQ8IUN9 316 aa8.75□□□□□ -1.01
CIT-211ENST00000541841 SHISA5Q8N114 240 aa8.75□□□□□ -1.01
CIT-211ENST00000541841 SHKBP1Q8TBC3 707 aa8.75□□□□□ -1.01
CIT-211ENST00000541841 EPS8L3Q8TE67 593 aaKnown RBP8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms