RNA–Protein interactions for RNA: ENST00000541819.6

GABRB3-204, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 5,934 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-204ENST00000541819 SRRTQ9BXP5 876 aaKnown RBP12.1□□□□□ -0.47
GABRB3-204ENST00000541819 TROQ12816 1431 aaPredicted RBP12.1□□□□□ -0.47
GABRB3-204ENST00000541819 GPR161Q8N6U8 529 aaKnown RBP12.1□□□□□ -0.47
GABRB3-204ENST00000541819 HAUS2Q9NVX0 235 aa12.1□□□□□ -0.47
GABRB3-204ENST00000541819 RTL1A6NKG5 1358 aa12.1□□□□□ -0.47
GABRB3-204ENST00000541819 GABPAQ06546 454 aa12.1□□□□□ -0.47
GABRB3-204ENST00000541819 KMT5BQ4FZB7 885 aa12.1□□□□□ -0.47
GABRB3-204ENST00000541819 HSP90AA4PQ58FG1 418 aa12.1□□□□□ -0.47
GABRB3-204ENST00000541819 TBC1D31Q96DN5 1066 aa12.1□□□□□ -0.47
GABRB3-204ENST00000541819 IQSEC3Q9UPP2 1182 aaPredicted RBP12.1□□□□□ -0.47
GABRB3-204ENST00000541819 TUBB4BP68371 445 aa12.09□□□□□ -0.47
GABRB3-204ENST00000541819 SP4Q02446 784 aa12.09□□□□□ -0.47
GABRB3-204ENST00000541819 CPLX4Q7Z7G2 160 aa12.09□□□□□ -0.47
GABRB3-204ENST00000541819 ZC3H12CQ9C0D7 883 aaKnown RBP12.09□□□□□ -0.47
GABRB3-204ENST00000541819 ARID4AP29374 1257 aaPredicted RBP12.09□□□□□ -0.47
GABRB3-204ENST00000541819 PPFIBP2Q8ND30 876 aa12.09□□□□□ -0.47
GABRB3-204ENST00000541819 JARID2Q92833 1246 aaPredicted RBP12.09□□□□□ -0.47
GABRB3-204ENST00000541819 EPSTI1Q96J88 318 aa12.09□□□□□ -0.47
GABRB3-204ENST00000541819 NIP7Q9Y221 180 aaKnown RBP eCLIP12.09□□□□□ -0.47
GABRB3-204ENST00000541819 DAPK3O43293 454 aa12.09□□□□□ -0.47
GABRB3-204ENST00000541819 SKILP12757 684 aa12.09□□□□□ -0.47
GABRB3-204ENST00000541819 ERCC5P28715 1186 aaPredicted RBP12.09□□□□□ -0.47
GABRB3-204ENST00000541819 BIRC3Q13489 604 aa12.09□□□□□ -0.47
GABRB3-204ENST00000541819 UAP1Q16222 522 aaPredicted RBP12.09□□□□□ -0.47
GABRB3-204ENST00000541819 AOPEPQ8N6M6 819 aa12.09□□□□□ -0.47
GABRB3-204ENST00000541819 STMN2Q93045 179 aa12.09□□□□□ -0.47
GABRB3-204ENST00000541819 ACSBG1Q96GR2 724 aa12.09□□□□□ -0.47
GABRB3-204ENST00000541819 CAPZA3Q96KX2 299 aa12.09□□□□□ -0.47
GABRB3-204ENST00000541819 TACC3Q9Y6A5 838 aa12.09□□□□□ -0.47
GABRB3-204ENST00000541819 GIPC1O14908 333 aa12.09□□□□□ -0.47
GABRB3-204ENST00000541819 ZBTB24O43167 697 aaPredicted RBP12.09□□□□□ -0.47
GABRB3-204ENST00000541819 SYT1P21579 422 aa12.09□□□□□ -0.47
GABRB3-204ENST00000541819 GIMAP6Q6P9H5 292 aa12.09□□□□□ -0.47
GABRB3-204ENST00000541819 Q6ZUG5 572 aa12.09□□□□□ -0.47
GABRB3-204ENST00000541819 SWAP70Q9UH65 585 aa12.09□□□□□ -0.47
GABRB3-204ENST00000541819 EPB41P11171 864 aaKnown RBP12.09□□□□□ -0.47
GABRB3-204ENST00000541819 MCM6Q14566 821 aa12.09□□□□□ -0.47
GABRB3-204ENST00000541819 INTS8Q75QN2 995 aaKnown RBP12.09□□□□□ -0.47
GABRB3-204ENST00000541819 ZCRB1Q8TBF4 217 aaKnown RBP12.09□□□□□ -0.47
GABRB3-204ENST00000541819 GPHNQ9NQX3 736 aaPredicted RBP12.09□□□□□ -0.47
GABRB3-204ENST00000541819 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.09□□□□□ -0.47
GABRB3-204ENST00000541819 NKIRAS1Q9NYS0 192 aa12.09□□□□□ -0.47
GABRB3-204ENST00000541819 TMOD4Q9NZQ9 345 aa12.09□□□□□ -0.47
GABRB3-204ENST00000541819 EFCAB5A4FU69 1503 aa12.08□□□□□ -0.47
GABRB3-204ENST00000541819 MARCKSP29966 332 aaPredicted RBP12.08□□□□□ -0.48
GABRB3-204ENST00000541819 DCAF17Q5H9S7 520 aaPredicted RBP12.08□□□□□ -0.48
GABRB3-204ENST00000541819 ARFGAP2Q8N6H7 521 aa12.08□□□□□ -0.48
GABRB3-204ENST00000541819 RAPGEF1Q13905 1077 aa12.08□□□□□ -0.48
GABRB3-204ENST00000541819 SLC9C2Q5TAH2 1124 aa12.08□□□□□ -0.48
GABRB3-204ENST00000541819 WDR66Q8TBY9 1149 aa12.08□□□□□ -0.48
GABRB3-204ENST00000541819 IL15P40933 162 aaPredicted RBP12.08□□□□□ -0.48
GABRB3-204ENST00000541819 NECAB1Q8N987 351 aa12.08□□□□□ -0.48
GABRB3-204ENST00000541819 RHPN1Q8TCX5 695 aa12.08□□□□□ -0.48
GABRB3-204ENST00000541819 IFT81Q8WYA0 676 aa12.08□□□□□ -0.48
GABRB3-204ENST00000541819 TTC36A6NLP5 189 aa12.08□□□□□ -0.48
GABRB3-204ENST00000541819 BMP2KLQ5H9B9 411 aa12.08□□□□□ -0.48
GABRB3-204ENST00000541819 FYB2Q5VWT5 728 aa12.08□□□□□ -0.48
GABRB3-204ENST00000541819 ANKRD2Q9GZV1 360 aa12.08□□□□□ -0.48
GABRB3-204ENST00000541819 MCM9Q9NXL9 1143 aa12.08□□□□□ -0.48
GABRB3-204ENST00000541819 RIOK3O14730 519 aaKnown RBP12.07□□□□□ -0.48
GABRB3-204ENST00000541819 MCM7P33993 719 aa12.07□□□□□ -0.48
GABRB3-204ENST00000541819 MAP7Q14244 749 aa12.07□□□□□ -0.48
GABRB3-204ENST00000541819 TBC1D2Q9BYX2 928 aa12.07□□□□□ -0.48
GABRB3-204ENST00000541819 RBM28Q9NW13 759 aaKnown RBP12.07□□□□□ -0.48
GABRB3-204ENST00000541819 NSD2O96028 1365 aa12.07□□□□□ -0.48
GABRB3-204ENST00000541819 ZSCAN23Q3MJ62 389 aa12.07□□□□□ -0.48
GABRB3-204ENST00000541819 LEO1Q8WVC0 666 aaPredicted RBP12.07□□□□□ -0.48
GABRB3-204ENST00000541819 LRRC2Q9BYS8 371 aa12.07□□□□□ -0.48
GABRB3-204ENST00000541819 PICK1Q9NRD5 415 aa12.07□□□□□ -0.48
GABRB3-204ENST00000541819 MSH6P52701 1360 aa12.07□□□□□ -0.48
GABRB3-204ENST00000541819 TLDC2A0PJX2 215 aa12.07□□□□□ -0.48
GABRB3-204ENST00000541819 KIF3CO14782 793 aa12.07□□□□□ -0.48
GABRB3-204ENST00000541819 HSPA1LP34931 641 aa12.07□□□□□ -0.48
GABRB3-204ENST00000541819 SMTNP53814 917 aa12.07□□□□□ -0.48
GABRB3-204ENST00000541819 LACTBP83111 547 aaPredicted RBP12.07□□□□□ -0.48
GABRB3-204ENST00000541819 LIN9Q5TKA1 542 aa12.07□□□□□ -0.48
GABRB3-204ENST00000541819 DTHD1Q6ZMT9 781 aa12.07□□□□□ -0.48
GABRB3-204ENST00000541819 GSDMBQ8TAX9 411 aa12.07□□□□□ -0.48
GABRB3-204ENST00000541819 NSMCE1Q8WV22 266 aa12.07□□□□□ -0.48
GABRB3-204ENST00000541819 HARSP12081 509 aaKnown RBP12.07□□□□□ -0.48
GABRB3-204ENST00000541819 CNGA1P29973 690 aa12.07□□□□□ -0.48
GABRB3-204ENST00000541819 VAV2P52735 878 aa12.07□□□□□ -0.48
GABRB3-204ENST00000541819 ITIH3Q06033 890 aa12.07□□□□□ -0.48
GABRB3-204ENST00000541819 UBLCP1Q8WVY7 318 aaPredicted RBP12.07□□□□□ -0.48
GABRB3-204ENST00000541819 NACA2Q9H009 215 aa12.07□□□□□ -0.48
GABRB3-204ENST00000541819 KRT9P35527 623 aa12.07□□□□□ -0.48
GABRB3-204ENST00000541819 TRPC3Q13507 836 aa12.07□□□□□ -0.48
GABRB3-204ENST00000541819 CCDC26Q8TAB7 109 aa12.07□□□□□ -0.48
GABRB3-204ENST00000541819 RBM17Q96I25 401 aaKnown RBP12.07□□□□□ -0.48
GABRB3-204ENST00000541819 PARP1P09874 1014 aaKnown RBP12.06□□□□□ -0.48
GABRB3-204ENST00000541819 HCLS1P14317 486 aaPredicted RBP12.06□□□□□ -0.48
GABRB3-204ENST00000541819 TRIM27P14373 513 aa12.06□□□□□ -0.48
GABRB3-204ENST00000541819 STRN3Q13033 797 aa12.06□□□□□ -0.48
GABRB3-204ENST00000541819 TPTE2Q6XPS3 522 aa12.06□□□□□ -0.48
GABRB3-204ENST00000541819 CADPS2Q86UW7 1296 aa12.06□□□□□ -0.48
GABRB3-204ENST00000541819 GUCA1BQ9UMX6 200 aa12.06□□□□□ -0.48
GABRB3-204ENST00000541819 RBM8AQ9Y5S9 174 aaKnown RBP12.06□□□□□ -0.48
GABRB3-204ENST00000541819 GTF2A1P52655 376 aaPredicted RBP12.06□□□□□ -0.48
GABRB3-204ENST00000541819 TSHZ3Q63HK5 1081 aa12.06□□□□□ -0.48
GABRB3-204ENST00000541819 SRGAP1Q7Z6B7 1085 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms