RNA–Protein interactions for RNA: ENST00000541366.1

COPA-205, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-205ENST00000541366 NBPF12Q5TAG4 269 aaPredicted RBP15.23■□□□□ 0.03
COPA-205ENST00000541366 ERO1AQ96HE7 468 aa15.23■□□□□ 0.03
COPA-205ENST00000541366 ADAMTS8Q9UP79 889 aa15.23■□□□□ 0.03
COPA-205ENST00000541366 RALBP1Q15311 655 aa15.22■□□□□ 0.03
COPA-205ENST00000541366 DLGAP5Q15398 846 aa15.22■□□□□ 0.03
COPA-205ENST00000541366 LEMD3Q9Y2U8 911 aa15.22■□□□□ 0.03
COPA-205ENST00000541366 RANBP2P49792 3224 aaKnown RBP15.21■□□□□ 0.03
COPA-205ENST00000541366 PI4KAP2A4QPH2 592 aa15.21■□□□□ 0.03
COPA-205ENST00000541366 PPP1R12BO60237 982 aaPredicted RBP15.21■□□□□ 0.03
COPA-205ENST00000541366 USP2O75604 605 aaPredicted RBP15.21■□□□□ 0.03
COPA-205ENST00000541366 MYCP01106 439 aaPredicted RBP15.21■□□□□ 0.03
COPA-205ENST00000541366 SP3Q02447 781 aa15.21■□□□□ 0.03
COPA-205ENST00000541366 PI4KAP1Q8N8J0 262 aa15.21■□□□□ 0.03
COPA-205ENST00000541366 JAG2Q9Y219 1238 aa15.21■□□□□ 0.03
COPA-205ENST00000541366 LAMB1P07942 1786 aa15.21■□□□□ 0.02
COPA-205ENST00000541366 DDX58O95786 925 aaKnown RBP15.2■□□□□ 0.02
COPA-205ENST00000541366 WDR43Q15061 677 aaKnown RBP eCLIP15.2■□□□□ 0.02
COPA-205ENST00000541366 UBE3BQ7Z3V4 1068 aa15.2■□□□□ 0.02
COPA-205ENST00000541366 TSPYL6Q8N831 410 aa15.2■□□□□ 0.02
COPA-205ENST00000541366 ZNF333Q96JL9 665 aa15.2■□□□□ 0.02
COPA-205ENST00000541366 PRMT6Q96LA8 375 aaPredicted RBP15.2■□□□□ 0.02
COPA-205ENST00000541366 VEZTQ9HBM0 779 aa15.2■□□□□ 0.02
COPA-205ENST00000541366 CD209Q9NNX6 404 aa15.2■□□□□ 0.02
COPA-205ENST00000541366 PTCH2Q9Y6C5 1203 aa15.2■□□□□ 0.02
COPA-205ENST00000541366 COL1A1P02452 1464 aaPredicted RBP15.2■□□□□ 0.02
COPA-205ENST00000541366 ITGA6P23229 1130 aa15.19■□□□□ 0.02
COPA-205ENST00000541366 IGHMBP2P38935 993 aaKnown RBP15.19■□□□□ 0.02
COPA-205ENST00000541366 MMP14P50281 582 aa15.19■□□□□ 0.02
COPA-205ENST00000541366 CFAP100Q494V2 611 aa15.19■□□□□ 0.02
COPA-205ENST00000541366 KSR2Q6VAB6 950 aa15.19■□□□□ 0.02
COPA-205ENST00000541366 HELBQ8NG08 1087 aaPredicted RBP15.19■□□□□ 0.02
COPA-205ENST00000541366 TMEM106CQ9BVX2 250 aa15.19■□□□□ 0.02
COPA-205ENST00000541366 ELP3Q9H9T3 547 aa15.19■□□□□ 0.02
COPA-205ENST00000541366 IFT57Q9NWB7 429 aa15.19■□□□□ 0.02
COPA-205ENST00000541366 ECM29Q5VYK3 1845 aa15.18■□□□□ 0.02
COPA-205ENST00000541366 SPDYE2BA6NHP3 402 aa15.18■□□□□ 0.02
COPA-205ENST00000541366 NEURL1BA8MQ27 555 aa15.18■□□□□ 0.02
COPA-205ENST00000541366 ZBTB22O15209 634 aa15.18■□□□□ 0.02
COPA-205ENST00000541366 TAF5LO75529 589 aa15.18■□□□□ 0.02
COPA-205ENST00000541366 SPDYE6P0CI01 402 aa15.18■□□□□ 0.02
COPA-205ENST00000541366 KCNJ4P48050 445 aa15.18■□□□□ 0.02
COPA-205ENST00000541366 CHRNDQ07001 517 aa15.18■□□□□ 0.02
COPA-205ENST00000541366 SUPT20HL1Q3ZLR7 823 aa15.18■□□□□ 0.02
COPA-205ENST00000541366 CDAN1Q8IWY9 1227 aa15.18■□□□□ 0.02
COPA-205ENST00000541366 MTMR14Q8NCE2 650 aa15.18■□□□□ 0.02
COPA-205ENST00000541366 ANKRD2Q9GZV1 360 aa15.18■□□□□ 0.02
COPA-205ENST00000541366 OTOFQ9HC10 1997 aa15.18■□□□□ 0.02
COPA-205ENST00000541366 MYBBP1AQ9BQG0 1328 aaKnown RBP15.17■□□□□ 0.02
COPA-205ENST00000541366 IRS2Q9Y4H2 1338 aa15.17■□□□□ 0.02
COPA-205ENST00000541366 TESPA1A2RU30 521 aaPredicted RBP15.17■□□□□ 0.02
COPA-205ENST00000541366 H0YGN5 161 aa15.17■□□□□ 0.02
COPA-205ENST00000541366 H7C1W4 665 aa15.17■□□□□ 0.02
COPA-205ENST00000541366 MYCNP04198 464 aaPredicted RBP15.17■□□□□ 0.02
COPA-205ENST00000541366 IREB2P48200 963 aaKnown RBP15.17■□□□□ 0.02
COPA-205ENST00000541366 GNAI1P63096 354 aa15.17■□□□□ 0.02
COPA-205ENST00000541366 RASA3Q14644 834 aa15.17■□□□□ 0.02
COPA-205ENST00000541366 CCDC30Q5VVM6 783 aa15.17■□□□□ 0.02
COPA-205ENST00000541366 OTUD7BQ6GQQ9 843 aa15.17■□□□□ 0.02
COPA-205ENST00000541366 G2E3Q7L622 706 aa15.17■□□□□ 0.02
COPA-205ENST00000541366 OPTNQ96CV9 577 aa15.17■□□□□ 0.02
COPA-205ENST00000541366 MS4A4AQ96JQ5 239 aa15.17■□□□□ 0.02
COPA-205ENST00000541366 MPHOSPH8Q99549 860 aa15.17■□□□□ 0.02
COPA-205ENST00000541366 PPP2R3BQ9Y5P8 575 aa15.17■□□□□ 0.02
COPA-205ENST00000541366 ZSWIM8A7E2V4 1837 aa15.17■□□□□ 0.02
COPA-205ENST00000541366 APAF1O14727 1248 aa15.16■□□□□ 0.02
COPA-205ENST00000541366 SLC4A8Q2Y0W8 1093 aa15.16■□□□□ 0.02
COPA-205ENST00000541366 SLC9C1Q4G0N8 1177 aa15.16■□□□□ 0.02
COPA-205ENST00000541366 ANKRD13AQ8IZ07 590 aa15.16■□□□□ 0.02
COPA-205ENST00000541366 BRI3BPQ8WY22 251 aa15.16■□□□□ 0.02
COPA-205ENST00000541366 RBM5P52756 815 aaKnown RBP eCLIP15.15■□□□□ 0.02
COPA-205ENST00000541366 CASP7P55210 303 aa15.15■□□□□ 0.02
COPA-205ENST00000541366 NEXNQ0ZGT2 675 aa15.15■□□□□ 0.02
COPA-205ENST00000541366 SH3TC2Q8TF17 1288 aa15.15■□□□□ 0.02
COPA-205ENST00000541366 OTUD5Q96G74 571 aa15.15■□□□□ 0.02
COPA-205ENST00000541366 ARHGAP39Q9C0H5 1083 aa15.15■□□□□ 0.02
COPA-205ENST00000541366 UNCXA6NJT0 531 aa15.14■□□□□ 0.01
COPA-205ENST00000541366 MYO1BO43795 1136 aa15.14■□□□□ 0.01
COPA-205ENST00000541366 ECM2O94769 699 aaPredicted RBP15.14■□□□□ 0.01
COPA-205ENST00000541366 CSF1RP07333 972 aa15.14■□□□□ 0.01
COPA-205ENST00000541366 TAF1CQ15572 869 aaPredicted RBP15.14■□□□□ 0.01
COPA-205ENST00000541366 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.14■□□□□ 0.01
COPA-205ENST00000541366 FAM43AQ8N2R8 423 aa15.14■□□□□ 0.01
COPA-205ENST00000541366 PLA2G12BQ9BX93 195 aa15.14■□□□□ 0.01
COPA-205ENST00000541366 CCL15-CCL14A0A0B4J2E2 113 aa15.13■□□□□ 0.01
COPA-205ENST00000541366 GCKRQ14397 625 aa15.13■□□□□ 0.01
COPA-205ENST00000541366 CCL15Q16663 113 aa15.13■□□□□ 0.01
COPA-205ENST00000541366 CHRDL2Q6WN34 429 aa15.13■□□□□ 0.01
COPA-205ENST00000541366 NBPF11Q86T75 865 aa15.13■□□□□ 0.01
COPA-205ENST00000541366 IL1R1P14778 569 aa15.12■□□□□ 0.01
COPA-205ENST00000541366 TSR2Q969E8 191 aaKnown RBP15.12■□□□□ 0.01
COPA-205ENST00000541366 TEPSINQ96N21 525 aa15.12■□□□□ 0.01
COPA-205ENST00000541366 TDRD3Q9H7E2 651 aaKnown RBP15.12■□□□□ 0.01
COPA-205ENST00000541366 ZFYVE28Q9HCC9 887 aa15.12■□□□□ 0.01
COPA-205ENST00000541366 ZNF70Q9UC06 446 aaPredicted RBP15.12■□□□□ 0.01
COPA-205ENST00000541366 A0A0C4DFX4 3053 aa15.12■□□□□ 0.01
COPA-205ENST00000541366 A0A1B0GUL6 1792 aa15.11■□□□□ 0.01
COPA-205ENST00000541366 COL6A3P12111 3177 aa15.11■□□□□ 0.01
COPA-205ENST00000541366 DDX10Q13206 875 aaKnown RBP15.11■□□□□ 0.01
COPA-205ENST00000541366 VGLL4Q14135 290 aa15.11■□□□□ 0.01
COPA-205ENST00000541366 SPDYE2Q495Y8 402 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms