RNA–Protein interactions for RNA: ENST00000541347.5

CX3CR1-205, Transcript of C-X3-C motif chemokine receptor 1, humanhuman

APPRIS P1 TSL 4 BASIC

Gene CX3CR1, Length 3,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1-205ENST00000541347 PDE6AP16499 860 aa12.77□□□□□ -0.37
CX3CR1-205ENST00000541347 COL24A1Q17RW2 1714 aa12.77□□□□□ -0.37
CX3CR1-205ENST00000541347 FOXD4L6Q3SYB3 417 aaPredicted RBP12.77□□□□□ -0.37
CX3CR1-205ENST00000541347 FOXD4L3Q6VB84 417 aaPredicted RBP12.77□□□□□ -0.37
CX3CR1-205ENST00000541347 C4BP0C0L5 1744 aa12.76□□□□□ -0.37
CX3CR1-205ENST00000541347 PHF14O94880 888 aa12.76□□□□□ -0.37
CX3CR1-205ENST00000541347 IMMTQ16891 758 aaKnown RBP12.76□□□□□ -0.37
CX3CR1-205ENST00000541347 GPT2Q8TD30 523 aa12.76□□□□□ -0.37
CX3CR1-205ENST00000541347 CELF1Q92879 486 aaKnown RBP12.76□□□□□ -0.37
CX3CR1-205ENST00000541347 BRF1Q92994 677 aa12.76□□□□□ -0.37
CX3CR1-205ENST00000541347 LRRC4BQ9NT99 713 aa12.76□□□□□ -0.37
CX3CR1-205ENST00000541347 LAMA4Q16363 1823 aa12.76□□□□□ -0.37
CX3CR1-205ENST00000541347 GTF3C6Q969F1 213 aa12.76□□□□□ -0.37
CX3CR1-205ENST00000541347 MTMR6Q9Y217 621 aa12.76□□□□□ -0.37
CX3CR1-205ENST00000541347 CASZ1Q86V15 1759 aa12.75□□□□□ -0.37
CX3CR1-205ENST00000541347 F13A1P00488 732 aa12.75□□□□□ -0.37
CX3CR1-205ENST00000541347 RFC4P35249 363 aa12.75□□□□□ -0.37
CX3CR1-205ENST00000541347 HAND2P61296 217 aa12.75□□□□□ -0.37
CX3CR1-205ENST00000541347 TRAPPC3LQ5T215 181 aa12.75□□□□□ -0.37
CX3CR1-205ENST00000541347 L1TD1Q5T7N2 865 aaKnown RBP12.75□□□□□ -0.37
CX3CR1-205ENST00000541347 TPTE2Q6XPS3 522 aa12.75□□□□□ -0.37
CX3CR1-205ENST00000541347 FAM196AQ6ZSG2 479 aa12.75□□□□□ -0.37
CX3CR1-205ENST00000541347 NLRP3Q96P20 1036 aa12.75□□□□□ -0.37
CX3CR1-205ENST00000541347 MINPP1Q9UNW1 487 aa12.75□□□□□ -0.37
CX3CR1-205ENST00000541347 NCLP19338 710 aaKnown RBP12.75□□□□□ -0.37
CX3CR1-205ENST00000541347 FGD1P98174 961 aa12.75□□□□□ -0.37
CX3CR1-205ENST00000541347 CCDC24Q8N4L8 307 aa12.75□□□□□ -0.37
CX3CR1-205ENST00000541347 AGXT2Q9BYV1 514 aa12.75□□□□□ -0.37
CX3CR1-205ENST00000541347 MYO5AQ9Y4I1 1855 aaKnown RBP12.75□□□□□ -0.37
CX3CR1-205ENST00000541347 WTIPA6NIX2 430 aaPredicted RBP12.75□□□□□ -0.37
CX3CR1-205ENST00000541347 MAP3K12Q12852 859 aa12.75□□□□□ -0.37
CX3CR1-205ENST00000541347 TAF1P21675 1872 aa12.74□□□□□ -0.37
CX3CR1-205ENST00000541347 C4AP0C0L4 1744 aa12.74□□□□□ -0.37
CX3CR1-205ENST00000541347 UBE4AQ14139 1066 aa12.74□□□□□ -0.37
CX3CR1-205ENST00000541347 LARP1BQ659C4 914 aaKnown RBP12.74□□□□□ -0.37
CX3CR1-205ENST00000541347 CHST3Q7LGC8 479 aa12.74□□□□□ -0.37
CX3CR1-205ENST00000541347 MAGEB6Q8N7X4 407 aa12.74□□□□□ -0.37
CX3CR1-205ENST00000541347 ZNF213O14771 459 aa12.73□□□□□ -0.37
CX3CR1-205ENST00000541347 CAVIN1Q6NZI2 390 aaKnown RBP12.73□□□□□ -0.37
CX3CR1-205ENST00000541347 ZNF804BA4D1E1 1349 aa12.73□□□□□ -0.37
CX3CR1-205ENST00000541347 DOCK2Q92608 1830 aa12.73□□□□□ -0.37
CX3CR1-205ENST00000541347 GYG1P46976 350 aa12.73□□□□□ -0.37
CX3CR1-205ENST00000541347 RPS8P62241 208 aaKnown RBP12.73□□□□□ -0.37
CX3CR1-205ENST00000541347 APOBRQ0VD83 1088 aa12.73□□□□□ -0.37
CX3CR1-205ENST00000541347 SCRN1Q12765 414 aa12.73□□□□□ -0.37
CX3CR1-205ENST00000541347 STRBPQ96SI9 672 aaKnown RBP12.73□□□□□ -0.37
CX3CR1-205ENST00000541347 GDPD2Q9HCC8 539 aa12.73□□□□□ -0.37
CX3CR1-205ENST00000541347 NSFL1CQ9UNZ2 370 aaKnown RBP12.73□□□□□ -0.37
CX3CR1-205ENST00000541347 A0A1B0GUL6 1792 aa12.73□□□□□ -0.37
CX3CR1-205ENST00000541347 VPS37CA5D8V6 355 aaPredicted RBP12.73□□□□□ -0.37
CX3CR1-205ENST00000541347 PFKFB2O60825 505 aa12.73□□□□□ -0.37
CX3CR1-205ENST00000541347 GAS2L3Q86XJ1 694 aa12.73□□□□□ -0.37
CX3CR1-205ENST00000541347 AIDAQ96BJ3 306 aa12.73□□□□□ -0.37
CX3CR1-205ENST00000541347 JAK2O60674 1132 aa12.72□□□□□ -0.37
CX3CR1-205ENST00000541347 PDIA4P13667 645 aaKnown RBP12.72□□□□□ -0.37
CX3CR1-205ENST00000541347 PDCP20941 246 aa12.72□□□□□ -0.37
CX3CR1-205ENST00000541347 USP48Q86UV5 1035 aa12.72□□□□□ -0.37
CX3CR1-205ENST00000541347 FBXL16Q8N461 479 aa12.72□□□□□ -0.37
CX3CR1-205ENST00000541347 NBPF3Q9H094 633 aa12.72□□□□□ -0.37
CX3CR1-205ENST00000541347 ISY1Q9ULR0 285 aaKnown RBP12.72□□□□□ -0.37
CX3CR1-205ENST00000541347 ATP6V1DQ9Y5K8 247 aa12.72□□□□□ -0.37
CX3CR1-205ENST00000541347 APPP05067 770 aa12.72□□□□□ -0.37
CX3CR1-205ENST00000541347 TM4SF1P30408 202 aa12.72□□□□□ -0.37
CX3CR1-205ENST00000541347 MB21D2Q8IYB1 491 aaPredicted RBP12.72□□□□□ -0.37
CX3CR1-205ENST00000541347 IQSEC3Q9UPP2 1182 aaPredicted RBP12.72□□□□□ -0.37
CX3CR1-205ENST00000541347 CNPY2Q9Y2B0 182 aa12.72□□□□□ -0.37
CX3CR1-205ENST00000541347 XRCC6P12956 609 aaKnown RBP eCLIP12.72□□□□□ -0.37
CX3CR1-205ENST00000541347 NFIXQ14938 502 aa12.72□□□□□ -0.37
CX3CR1-205ENST00000541347 KRT27Q7Z3Y8 459 aa12.72□□□□□ -0.37
CX3CR1-205ENST00000541347 TMEM87AQ8NBN3 555 aa12.72□□□□□ -0.37
CX3CR1-205ENST00000541347 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.71□□□□□ -0.37
CX3CR1-205ENST00000541347 MBD3O95983 291 aa12.71□□□□□ -0.37
CX3CR1-205ENST00000541347 ADRA2BP18089 450 aa12.71□□□□□ -0.37
CX3CR1-205ENST00000541347 CDC37L1Q7L3B6 337 aa12.71□□□□□ -0.37
CX3CR1-205ENST00000541347 NCOA7Q8NI08 942 aa12.71□□□□□ -0.37
CX3CR1-205ENST00000541347 RBM27Q9P2N5 1060 aaKnown RBP12.71□□□□□ -0.37
CX3CR1-205ENST00000541347 CARMIL3Q8ND23 1372 aa12.71□□□□□ -0.37
CX3CR1-205ENST00000541347 MBD4O95243 580 aa12.71□□□□□ -0.38
CX3CR1-205ENST00000541347 ZSCAN23Q3MJ62 389 aa12.71□□□□□ -0.38
CX3CR1-205ENST00000541347 CAVIN4Q5BKX8 364 aa12.71□□□□□ -0.38
CX3CR1-205ENST00000541347 GNL3LQ9NVN8 582 aaKnown RBP12.71□□□□□ -0.38
CX3CR1-205ENST00000541347 LRP2BPQ9P2M1 347 aa12.71□□□□□ -0.38
CX3CR1-205ENST00000541347 PATL2C9JE40 543 aaKnown RBP12.7□□□□□ -0.38
CX3CR1-205ENST00000541347 NPHP1O15259 732 aa12.7□□□□□ -0.38
CX3CR1-205ENST00000541347 GADD45BO75293 160 aaPredicted RBP12.7□□□□□ -0.38
CX3CR1-205ENST00000541347 PDIA3P30101 505 aaKnown RBP12.7□□□□□ -0.38
CX3CR1-205ENST00000541347 MCM5P33992 734 aa12.7□□□□□ -0.38
CX3CR1-205ENST00000541347 MRE11P49959 708 aa12.7□□□□□ -0.38
CX3CR1-205ENST00000541347 FAM84BQ96KN1 310 aaPredicted RBP12.7□□□□□ -0.38
CX3CR1-205ENST00000541347 LLPHQ9BRT6 129 aaKnown RBP12.7□□□□□ -0.38
CX3CR1-205ENST00000541347 ARMT1Q9H993 441 aa12.7□□□□□ -0.38
CX3CR1-205ENST00000541347 GPHNQ9NQX3 736 aaPredicted RBP12.7□□□□□ -0.38
CX3CR1-205ENST00000541347 COL1A1P02452 1464 aaPredicted RBP12.7□□□□□ -0.38
CX3CR1-205ENST00000541347 PRC1O43663 620 aa12.7□□□□□ -0.38
CX3CR1-205ENST00000541347 TBC1D10CQ8IV04 446 aa12.7□□□□□ -0.38
CX3CR1-205ENST00000541347 SMARCC2Q8TAQ2 1214 aa12.7□□□□□ -0.38
CX3CR1-205ENST00000541347 ZNF274Q96GC6 653 aaPredicted RBP12.7□□□□□ -0.38
CX3CR1-205ENST00000541347 GRPEL1Q9HAV7 217 aa12.7□□□□□ -0.38
CX3CR1-205ENST00000541347 BRPF3Q9ULD4 1205 aa12.7□□□□□ -0.38
CX3CR1-205ENST00000541347 TRIM37O94972 964 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms