RNA–Protein interactions for RNA: ENST00000540876.1

CLDN2-202, Transcript of claudin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN2, Length 2,919 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2-202ENST00000540876 NGLY1Q96IV0 654 aa11.22□□□□□ -0.61
CLDN2-202ENST00000540876 MTMR6Q9Y217 621 aa11.22□□□□□ -0.61
CLDN2-202ENST00000540876 CDK12Q9NYV4 1490 aaPredicted RBP11.22□□□□□ -0.61
CLDN2-202ENST00000540876 TTC36A6NLP5 189 aa11.22□□□□□ -0.61
CLDN2-202ENST00000540876 NRDCO43847 1150 aa11.22□□□□□ -0.61
CLDN2-202ENST00000540876 GNAI1P63096 354 aa11.22□□□□□ -0.61
CLDN2-202ENST00000540876 TSHZ3Q63HK5 1081 aa11.22□□□□□ -0.61
CLDN2-202ENST00000540876 C11orf57Q6ZUT1 292 aaPredicted RBP11.22□□□□□ -0.61
CLDN2-202ENST00000540876 TEX11Q8IYF3 940 aa11.22□□□□□ -0.61
CLDN2-202ENST00000540876 CLSTN2Q9H4D0 955 aa11.22□□□□□ -0.61
CLDN2-202ENST00000540876 ZSWIM4Q9H7M6 989 aa11.22□□□□□ -0.61
CLDN2-202ENST00000540876 DDX19AQ9NUU7 478 aaKnown RBP11.22□□□□□ -0.61
CLDN2-202ENST00000540876 MAP2K7O14733 419 aa11.22□□□□□ -0.61
CLDN2-202ENST00000540876 CLSTN1O94985 981 aa11.22□□□□□ -0.61
CLDN2-202ENST00000540876 TUBB4AP04350 444 aa11.22□□□□□ -0.61
CLDN2-202ENST00000540876 SFPQP23246 707 aaKnown RBP eCLIP11.22□□□□□ -0.61
CLDN2-202ENST00000540876 GJB2P29033 226 aa11.22□□□□□ -0.61
CLDN2-202ENST00000540876 RBM5P52756 815 aaKnown RBP eCLIP11.22□□□□□ -0.61
CLDN2-202ENST00000540876 ATP2B2Q01814 1243 aa11.22□□□□□ -0.61
CLDN2-202ENST00000540876 IQCB1Q15051 598 aa11.22□□□□□ -0.61
CLDN2-202ENST00000540876 WWC2Q6AWC2 1192 aa11.22□□□□□ -0.61
CLDN2-202ENST00000540876 BICD2Q8TD16 824 aa11.22□□□□□ -0.61
CLDN2-202ENST00000540876 FBXW7Q969H0 707 aa11.22□□□□□ -0.61
CLDN2-202ENST00000540876 ITFG2Q969R8 447 aa11.22□□□□□ -0.61
CLDN2-202ENST00000540876 IRAK4Q9NWZ3 460 aa11.22□□□□□ -0.61
CLDN2-202ENST00000540876 JCADQ9P266 1359 aa11.21□□□□□ -0.61
CLDN2-202ENST00000540876 TTC41PQ6P2S7 1318 aa11.21□□□□□ -0.61
CLDN2-202ENST00000540876 PPP2R3AQ06190 1150 aa11.21□□□□□ -0.61
CLDN2-202ENST00000540876 HDXQ7Z353 690 aa11.21□□□□□ -0.61
CLDN2-202ENST00000540876 ZNF513Q8N8E2 541 aaPredicted RBP11.21□□□□□ -0.61
CLDN2-202ENST00000540876 STAG1Q8WVM7 1258 aa11.21□□□□□ -0.61
CLDN2-202ENST00000540876 DDX11Q96FC9 970 aa11.21□□□□□ -0.61
CLDN2-202ENST00000540876 TRIM6Q9C030 488 aaPredicted RBP11.21□□□□□ -0.61
CLDN2-202ENST00000540876 MBIPQ9NS73 344 aa11.21□□□□□ -0.61
CLDN2-202ENST00000540876 TFIP11Q9UBB9 837 aaKnown RBP11.21□□□□□ -0.61
CLDN2-202ENST00000540876 PARP3Q9Y6F1 533 aa11.21□□□□□ -0.61
CLDN2-202ENST00000540876 FRMD3A2A2Y4 597 aa11.21□□□□□ -0.62
CLDN2-202ENST00000540876 NR1I2O75469 434 aa11.21□□□□□ -0.62
CLDN2-202ENST00000540876 GCFC2P16383 781 aaKnown RBP11.21□□□□□ -0.62
CLDN2-202ENST00000540876 TWISTNBQ3B726 338 aaPredicted RBP11.21□□□□□ -0.62
CLDN2-202ENST00000540876 MEX3CQ5U5Q3 659 aaKnown RBP11.21□□□□□ -0.62
CLDN2-202ENST00000540876 JAKMIP3Q5VZ66 844 aa11.21□□□□□ -0.62
CLDN2-202ENST00000540876 AP1ARQ63HQ0 302 aa11.21□□□□□ -0.62
CLDN2-202ENST00000540876 TMC6Q7Z403 805 aa11.21□□□□□ -0.62
CLDN2-202ENST00000540876 TACO1Q9BSH4 297 aaKnown RBP11.21□□□□□ -0.62
CLDN2-202ENST00000540876 FAM204AQ9H8W3 233 aa11.21□□□□□ -0.62
CLDN2-202ENST00000540876 CD248Q9HCU0 757 aa11.21□□□□□ -0.62
CLDN2-202ENST00000540876 BSDC1Q9NW68 430 aaPredicted RBP11.21□□□□□ -0.62
CLDN2-202ENST00000540876 CAMTA1Q9Y6Y1 1673 aa11.21□□□□□ -0.62
CLDN2-202ENST00000540876 IL16Q14005 1332 aa11.2□□□□□ -0.62
CLDN2-202ENST00000540876 A0A087WWV3 80 aa11.2□□□□□ -0.62
CLDN2-202ENST00000540876 CCDC151A5D8V7 595 aa11.2□□□□□ -0.62
CLDN2-202ENST00000540876 SGSM2O43147 1006 aa11.2□□□□□ -0.62
CLDN2-202ENST00000540876 ERCC3P19447 782 aa11.2□□□□□ -0.62
CLDN2-202ENST00000540876 GPTP24298 496 aa11.2□□□□□ -0.62
CLDN2-202ENST00000540876 CCDC83Q8IWF9 413 aa11.2□□□□□ -0.62
CLDN2-202ENST00000540876 RILPL2Q969X0 211 aa11.2□□□□□ -0.62
CLDN2-202ENST00000540876 CLIC6Q96NY7 704 aa11.2□□□□□ -0.62
CLDN2-202ENST00000540876 FAM169AQ9Y6X4 670 aa11.2□□□□□ -0.62
CLDN2-202ENST00000540876 CAND2O75155 1236 aa11.2□□□□□ -0.62
CLDN2-202ENST00000540876 IFIT2P09913 472 aaKnown RBP11.2□□□□□ -0.62
CLDN2-202ENST00000540876 CCT5P48643 541 aa11.2□□□□□ -0.62
CLDN2-202ENST00000540876 RABGGTAQ92696 567 aa11.2□□□□□ -0.62
CLDN2-202ENST00000540876 SUGCTQ9HAC7 445 aa11.2□□□□□ -0.62
CLDN2-202ENST00000540876 MCM8Q9UJA3 840 aa11.2□□□□□ -0.62
CLDN2-202ENST00000540876 ODF2LQ9ULJ1 636 aa11.2□□□□□ -0.62
CLDN2-202ENST00000540876 LTN1O94822 1766 aa11.2□□□□□ -0.62
CLDN2-202ENST00000540876 FANCGO15287 622 aa11.19□□□□□ -0.62
CLDN2-202ENST00000540876 INPP5BP32019 993 aa11.19□□□□□ -0.62
CLDN2-202ENST00000540876 CCNHP51946 323 aaPredicted RBP11.19□□□□□ -0.62
CLDN2-202ENST00000540876 AK2P54819 239 aa11.19□□□□□ -0.62
CLDN2-202ENST00000540876 TBC1D8BQ0IIM8 1120 aa11.19□□□□□ -0.62
CLDN2-202ENST00000540876 VPS53Q5VIR6 699 aa11.19□□□□□ -0.62
CLDN2-202ENST00000540876 ARMCX5Q6P1M9 558 aa11.19□□□□□ -0.62
CLDN2-202ENST00000540876 ACBD3Q9H3P7 528 aa11.19□□□□□ -0.62
CLDN2-202ENST00000540876 CPDO75976 1380 aa11.19□□□□□ -0.62
CLDN2-202ENST00000540876 PHRF1Q9P1Y6 1649 aaKnown RBP11.19□□□□□ -0.62
CLDN2-202ENST00000540876 BRD3Q15059 726 aa11.19□□□□□ -0.62
CLDN2-202ENST00000540876 KRT24Q2M2I5 525 aa11.19□□□□□ -0.62
CLDN2-202ENST00000540876 ZC3H12AQ5D1E8 599 aaKnown RBP11.19□□□□□ -0.62
CLDN2-202ENST00000540876 TRIM65Q6PJ69 517 aa11.19□□□□□ -0.62
CLDN2-202ENST00000540876 C8orf58Q8NAV2 365 aa11.19□□□□□ -0.62
CLDN2-202ENST00000540876 GOLGA1Q92805 767 aa11.19□□□□□ -0.62
CLDN2-202ENST00000540876 CABS1Q96KC9 395 aa11.19□□□□□ -0.62
CLDN2-202ENST00000540876 SPATA32Q96LK8 384 aa11.19□□□□□ -0.62
CLDN2-202ENST00000540876 CAPN7Q9Y6W3 813 aa11.19□□□□□ -0.62
CLDN2-202ENST00000540876 IGSF1Q8N6C5 1336 aa11.19□□□□□ -0.62
CLDN2-202ENST00000540876 VAMP4O75379 141 aa11.19□□□□□ -0.62
CLDN2-202ENST00000540876 CAVIN2O95810 425 aa11.19□□□□□ -0.62
CLDN2-202ENST00000540876 TXLNAP40222 546 aa11.19□□□□□ -0.62
CLDN2-202ENST00000540876 CCDC150Q8NCX0 1101 aa11.19□□□□□ -0.62
CLDN2-202ENST00000540876 RABEP2Q9H5N1 569 aa11.19□□□□□ -0.62
CLDN2-202ENST00000540876 CPSF2Q9P2I0 782 aaKnown RBP11.19□□□□□ -0.62
CLDN2-202ENST00000540876 LIMCH1Q9UPQ0 1083 aa11.19□□□□□ -0.62
CLDN2-202ENST00000540876 LRP6O75581 1613 aa11.18□□□□□ -0.62
CLDN2-202ENST00000540876 EBAG9O00559 213 aa11.18□□□□□ -0.62
CLDN2-202ENST00000540876 MTHFSDQ2M296 383 aaKnown RBP11.18□□□□□ -0.62
CLDN2-202ENST00000540876 RSRC2Q7L4I2 434 aaKnown RBP11.18□□□□□ -0.62
CLDN2-202ENST00000540876 MCM10Q7L590 875 aa11.18□□□□□ -0.62
CLDN2-202ENST00000540876 MRPL50Q8N5N7 158 aaKnown RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms