RNA–Protein interactions for RNA: ENST00000539925.5

LTBR-207, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBR, Length 1,665 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-207ENST00000539925 ZNF532Q9HCE3 1301 aa20.38■□□□□ 0.85
LTBR-207ENST00000539925 PUS7LQ9H0K6 701 aaKnown RBP20.38■□□□□ 0.85
LTBR-207ENST00000539925 SMC3Q9UQE7 1217 aa20.38■□□□□ 0.85
LTBR-207ENST00000539925 CHGBP05060 677 aa20.37■□□□□ 0.85
LTBR-207ENST00000539925 ALX1Q15699 326 aa20.37■□□□□ 0.85
LTBR-207ENST00000539925 PRR5LQ6MZQ0 368 aa20.37■□□□□ 0.85
LTBR-207ENST00000539925 FBXL16Q8N461 479 aa20.37■□□□□ 0.85
LTBR-207ENST00000539925 AIDAQ96BJ3 306 aa20.37■□□□□ 0.85
LTBR-207ENST00000539925 LEMD3Q9Y2U8 911 aa20.37■□□□□ 0.85
LTBR-207ENST00000539925 TCRBV5S4A2TA0A5A2 114 aa20.36■□□□□ 0.85
LTBR-207ENST00000539925 BRD1O95696 1058 aa20.36■□□□□ 0.85
LTBR-207ENST00000539925 SERPINB2P05120 415 aa20.36■□□□□ 0.85
LTBR-207ENST00000539925 CRY2Q49AN0 593 aa20.36■□□□□ 0.85
LTBR-207ENST00000539925 TMC4Q7Z404 712 aa20.36■□□□□ 0.85
LTBR-207ENST00000539925 FBXO33Q7Z6M2 555 aa20.36■□□□□ 0.85
LTBR-207ENST00000539925 NLGN1Q8N2Q7 840 aa20.36■□□□□ 0.85
LTBR-207ENST00000539925 RPGRQ92834 1020 aaKnown RBP20.36■□□□□ 0.85
LTBR-207ENST00000539925 WDR19Q8NEZ3 1342 aa20.36■□□□□ 0.85
LTBR-207ENST00000539925 APBA3O96018 575 aa20.35■□□□□ 0.85
LTBR-207ENST00000539925 CPA1P15085 419 aa20.35■□□□□ 0.85
LTBR-207ENST00000539925 RBM17Q96I25 401 aaKnown RBP20.35■□□□□ 0.85
LTBR-207ENST00000539925 PROM2Q8N271 834 aa20.35■□□□□ 0.85
LTBR-207ENST00000539925 TFCP2L1Q9NZI6 479 aa20.35■□□□□ 0.85
LTBR-207ENST00000539925 LRP2BPQ9P2M1 347 aa20.35■□□□□ 0.85
LTBR-207ENST00000539925 DOCK2Q92608 1830 aa20.34■□□□□ 0.85
LTBR-207ENST00000539925 PNPLA7Q6ZV29 1317 aa20.34■□□□□ 0.85
LTBR-207ENST00000539925 A0A1B0GUL6 1792 aa20.34■□□□□ 0.85
LTBR-207ENST00000539925 CASZ1Q86V15 1759 aa20.34■□□□□ 0.85
LTBR-207ENST00000539925 E7EWF7 191 aa20.34■□□□□ 0.85
LTBR-207ENST00000539925 ZNF213O14771 459 aa20.34■□□□□ 0.85
LTBR-207ENST00000539925 BAG4O95429 457 aaKnown RBP20.34■□□□□ 0.85
LTBR-207ENST00000539925 FGAP02671 866 aa20.34■□□□□ 0.85
LTBR-207ENST00000539925 PDCP20941 246 aa20.34■□□□□ 0.85
LTBR-207ENST00000539925 FGD1P98174 961 aa20.34■□□□□ 0.85
LTBR-207ENST00000539925 SLFNL1Q499Z3 407 aa20.34■□□□□ 0.85
LTBR-207ENST00000539925 FAM84BQ96KN1 310 aaPredicted RBP20.34■□□□□ 0.85
LTBR-207ENST00000539925 SNAP23O00161 211 aa20.33■□□□□ 0.85
LTBR-207ENST00000539925 HIBADHP31937 336 aaKnown RBP20.33■□□□□ 0.85
LTBR-207ENST00000539925 TOB2Q14106 344 aaPredicted RBP20.33■□□□□ 0.85
LTBR-207ENST00000539925 C15orf52Q6ZUT6 534 aaKnown RBP20.33■□□□□ 0.85
LTBR-207ENST00000539925 MAGEB6Q8N7X4 407 aa20.33■□□□□ 0.85
LTBR-207ENST00000539925 AKT1S1Q96B36 256 aa20.33■□□□□ 0.85
LTBR-207ENST00000539925 STRBPQ96SI9 672 aaKnown RBP20.33■□□□□ 0.85
LTBR-207ENST00000539925 AGXT2Q9BYV1 514 aa20.33■□□□□ 0.85
LTBR-207ENST00000539925 NACAP1Q9BZK3 213 aa20.33■□□□□ 0.85
LTBR-207ENST00000539925 WWC3Q9ULE0 1092 aa20.33■□□□□ 0.85
LTBR-207ENST00000539925 TPCN1Q9ULQ1 816 aa20.33■□□□□ 0.85
LTBR-207ENST00000539925 ATP6V1DQ9Y5K8 247 aa20.33■□□□□ 0.85
LTBR-207ENST00000539925 PATL2C9JE40 543 aaKnown RBP20.32■□□□□ 0.84
LTBR-207ENST00000539925 BBOX1O75936 387 aa20.32■□□□□ 0.84
LTBR-207ENST00000539925 GSE1Q14687 1217 aa20.32■□□□□ 0.84
LTBR-207ENST00000539925 ME3Q16798 604 aa20.32■□□□□ 0.84
LTBR-207ENST00000539925 XDHP47989 1333 aa20.32■□□□□ 0.84
LTBR-207ENST00000539925 RGPD3A6NKT7 1758 aaPredicted RBP20.32■□□□□ 0.84
LTBR-207ENST00000539925 RGPD4Q7Z3J3 1758 aa20.32■□□□□ 0.84
LTBR-207ENST00000539925 HOXA10P31260 410 aaPredicted RBP20.32■□□□□ 0.84
LTBR-207ENST00000539925 GYG1P46976 350 aa20.32■□□□□ 0.84
LTBR-207ENST00000539925 EXOSC10Q01780 885 aaKnown RBP20.32■□□□□ 0.84
LTBR-207ENST00000539925 TRDNQ13061 729 aa20.32■□□□□ 0.84
LTBR-207ENST00000539925 CCDC83Q8IWF9 413 aa20.32■□□□□ 0.84
LTBR-207ENST00000539925 NCOA7Q8NI08 942 aa20.32■□□□□ 0.84
LTBR-207ENST00000539925 CRAMP1Q96RY5 1269 aa20.32■□□□□ 0.84
LTBR-207ENST00000539925 TAF6LQ9Y6J9 622 aa20.32■□□□□ 0.84
LTBR-207ENST00000539925 KLRG2A4D1S0 409 aaPredicted RBP20.31■□□□□ 0.84
LTBR-207ENST00000539925 POLRMTO00411 1230 aaKnown RBP20.31■□□□□ 0.84
LTBR-207ENST00000539925 TRAK2O60296 914 aa20.31■□□□□ 0.84
LTBR-207ENST00000539925 Q6ZUG5 572 aa20.31■□□□□ 0.84
LTBR-207ENST00000539925 STOX1Q6ZVD7 989 aa20.31■□□□□ 0.84
LTBR-207ENST00000539925 RALYLQ86SE5 291 aaKnown RBP20.31■□□□□ 0.84
LTBR-207ENST00000539925 FOXP2O15409 715 aa20.3■□□□□ 0.84
LTBR-207ENST00000539925 MCM5P33992 734 aa20.3■□□□□ 0.84
LTBR-207ENST00000539925 LLPHQ9BRT6 129 aaKnown RBP20.3■□□□□ 0.84
LTBR-207ENST00000539925 ZDHHC9Q9Y397 364 aa20.3■□□□□ 0.84
LTBR-207ENST00000539925 APPP05067 770 aa20.29■□□□□ 0.84
LTBR-207ENST00000539925 SPTY2D1Q68D10 685 aaPredicted RBP20.29■□□□□ 0.84
LTBR-207ENST00000539925 KIF3AQ9Y496 699 aa20.29■□□□□ 0.84
LTBR-207ENST00000539925 COL4A1P02462 1669 aa20.29■□□□□ 0.84
LTBR-207ENST00000539925 TNRC6CQ9HCJ0 1690 aaKnown RBP20.29■□□□□ 0.84
LTBR-207ENST00000539925 LARGE1O95461 756 aa20.29■□□□□ 0.84
LTBR-207ENST00000539925 ATP2B4P23634 1241 aa20.29■□□□□ 0.84
LTBR-207ENST00000539925 ZNF274Q96GC6 653 aaPredicted RBP20.29■□□□□ 0.84
LTBR-207ENST00000539925 ANKIB1Q9P2G1 1089 aa20.29■□□□□ 0.84
LTBR-207ENST00000539925 STX6O43752 255 aa20.28■□□□□ 0.84
LTBR-207ENST00000539925 MBD4O95243 580 aa20.28■□□□□ 0.84
LTBR-207ENST00000539925 PKP1Q13835 747 aa20.28■□□□□ 0.84
LTBR-207ENST00000539925 CCDC24Q8N4L8 307 aa20.28■□□□□ 0.84
LTBR-207ENST00000539925 GTF3C6Q969F1 213 aa20.28■□□□□ 0.84
LTBR-207ENST00000539925 BRIP1Q9BX63 1249 aa20.28■□□□□ 0.84
LTBR-207ENST00000539925 RAI14Q9P0K7 980 aa20.28■□□□□ 0.84
LTBR-207ENST00000539925 CYP7A1P22680 504 aa20.27■□□□□ 0.84
LTBR-207ENST00000539925 GJB2P29033 226 aa20.27■□□□□ 0.84
LTBR-207ENST00000539925 EVCP57679 992 aa20.27■□□□□ 0.84
LTBR-207ENST00000539925 TTLL5Q6EMB2 1281 aa20.27■□□□□ 0.84
LTBR-207ENST00000539925 ZNF804AQ7Z570 1209 aa20.27■□□□□ 0.84
LTBR-207ENST00000539925 NAPBQ9H115 298 aa20.27■□□□□ 0.84
LTBR-207ENST00000539925 CNNM2Q9H8M5 875 aa20.27■□□□□ 0.84
LTBR-207ENST00000539925 ABCF2Q9UG63 623 aa20.27■□□□□ 0.84
LTBR-207ENST00000539925 PFKFB2O60825 505 aa20.26■□□□□ 0.83
LTBR-207ENST00000539925 ZSCAN22P10073 491 aaPredicted RBP20.26■□□□□ 0.83
LTBR-207ENST00000539925 DDR1Q08345 913 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms