RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 FZD9O00144 591 aa18.8■□□□□ 0.6
DDB1-216ENST00000539739 MCAMP43121 646 aa18.8■□□□□ 0.6
DDB1-216ENST00000539739 CHAF1AQ13111 956 aaPredicted RBP18.8■□□□□ 0.6
DDB1-216ENST00000539739 RASGRF1Q13972 1273 aa18.8■□□□□ 0.6
DDB1-216ENST00000539739 TSHZ3Q63HK5 1081 aa18.8■□□□□ 0.6
DDB1-216ENST00000539739 TTLL5Q6EMB2 1281 aa18.8■□□□□ 0.6
DDB1-216ENST00000539739 FBXW7Q969H0 707 aa18.8■□□□□ 0.6
DDB1-216ENST00000539739 BOLA2Q9H3K6 86 aa18.8■□□□□ 0.6
DDB1-216ENST00000539739 OSBPL3Q9H4L5 887 aa18.8■□□□□ 0.6
DDB1-216ENST00000539739 USP17L3A6NCW0 530 aa18.79■□□□□ 0.6
DDB1-216ENST00000539739 USP17L4A6NCW7 530 aa18.79■□□□□ 0.6
DDB1-216ENST00000539739 YDJCA8MPS7 323 aa18.79■□□□□ 0.6
DDB1-216ENST00000539739 GTF2IP78347 998 aa18.79■□□□□ 0.6
DDB1-216ENST00000539739 USP17L1Q7RTZ2 530 aa18.79■□□□□ 0.6
DDB1-216ENST00000539739 SPATA5Q8NB90 893 aa18.79■□□□□ 0.6
DDB1-216ENST00000539739 WDR66Q8TBY9 1149 aa18.79■□□□□ 0.6
DDB1-216ENST00000539739 HMG20BQ9P0W2 317 aa18.79■□□□□ 0.6
DDB1-216ENST00000539739 SBF1O95248 1867 aa18.79■□□□□ 0.6
DDB1-216ENST00000539739 CCDC88AQ3V6T2 1871 aa18.79■□□□□ 0.6
DDB1-216ENST00000539739 PDS5AQ29RF7 1337 aaKnown RBP18.78■□□□□ 0.6
DDB1-216ENST00000539739 FAM205AQ6ZU69 1335 aa18.78■□□□□ 0.6
DDB1-216ENST00000539739 SCARF1Q14162 830 aa18.78■□□□□ 0.6
DDB1-216ENST00000539739 TNIP1Q15025 636 aa18.78■□□□□ 0.6
DDB1-216ENST00000539739 STRIP1Q5VSL9 837 aa18.78■□□□□ 0.6
DDB1-216ENST00000539739 TBC1D22AQ8WUA7 517 aa18.78■□□□□ 0.6
DDB1-216ENST00000539739 COL4A5P29400 1685 aa18.78■□□□□ 0.6
DDB1-216ENST00000539739 RAD17O75943 681 aa18.78■□□□□ 0.6
DDB1-216ENST00000539739 RGS3P49796 1198 aa18.78■□□□□ 0.6
DDB1-216ENST00000539739 CIAPIN1Q6FI81 312 aa18.78■□□□□ 0.6
DDB1-216ENST00000539739 PI4K2BQ8TCG2 481 aa18.78■□□□□ 0.6
DDB1-216ENST00000539739 HAUS7Q99871 368 aa18.78■□□□□ 0.6
DDB1-216ENST00000539739 KCNQ5Q9NR82 932 aa18.78■□□□□ 0.6
DDB1-216ENST00000539739 SNRKQ9NRH2 765 aa18.78■□□□□ 0.6
DDB1-216ENST00000539739 CHD4Q14839 1912 aa18.77■□□□□ 0.6
DDB1-216ENST00000539739 ZC3H4Q9UPT8 1303 aaKnown RBP18.77■□□□□ 0.6
DDB1-216ENST00000539739 CXCL9Q07325 125 aa18.77■□□□□ 0.6
DDB1-216ENST00000539739 ZGPATQ8N5A5 531 aaKnown RBP18.77■□□□□ 0.6
DDB1-216ENST00000539739 DNAJC2Q99543 621 aaKnown RBP18.77■□□□□ 0.6
DDB1-216ENST00000539739 JAG2Q9Y219 1238 aa18.77■□□□□ 0.6
DDB1-216ENST00000539739 DICER1Q9UPY3 1922 aaKnown RBP18.76■□□□□ 0.59
DDB1-216ENST00000539739 ZAP70P43403 619 aa18.76■□□□□ 0.59
DDB1-216ENST00000539739 PI16Q6UXB8 463 aa18.76■□□□□ 0.59
DDB1-216ENST00000539739 PSMD14O00487 310 aa18.75■□□□□ 0.59
DDB1-216ENST00000539739 TTF1Q15361 905 aaPredicted RBP18.75■□□□□ 0.59
DDB1-216ENST00000539739 MFSD14BQ5SR56 506 aa18.75■□□□□ 0.59
DDB1-216ENST00000539739 VIL1P09327 827 aaKnown RBP18.74■□□□□ 0.59
DDB1-216ENST00000539739 FKBP1AP62942 108 aaKnown RBP18.74■□□□□ 0.59
DDB1-216ENST00000539739 DACT2Q5SW24 774 aa18.74■□□□□ 0.59
DDB1-216ENST00000539739 SPTY2D1Q68D10 685 aaPredicted RBP18.74■□□□□ 0.59
DDB1-216ENST00000539739 DPY19L2Q6NUT2 758 aa18.74■□□□□ 0.59
DDB1-216ENST00000539739 SKAP1Q86WV1 359 aa18.74■□□□□ 0.59
DDB1-216ENST00000539739 PAG1Q9NWQ8 432 aa18.74■□□□□ 0.59
DDB1-216ENST00000539739 MYO3BQ8WXR4 1341 aa18.74■□□□□ 0.59
DDB1-216ENST00000539739 SALL1Q9NSC2 1324 aa18.74■□□□□ 0.59
DDB1-216ENST00000539739 GOLIM4O00461 696 aa18.74■□□□□ 0.59
DDB1-216ENST00000539739 CYP2E1P05181 493 aaPredicted RBP18.74■□□□□ 0.59
DDB1-216ENST00000539739 RSBN1LQ6PCB5 846 aaPredicted RBP18.74■□□□□ 0.59
DDB1-216ENST00000539739 ABCF2Q9UG63 623 aa18.74■□□□□ 0.59
DDB1-216ENST00000539739 NDUFB9Q9Y6M9 179 aa18.74■□□□□ 0.59
DDB1-216ENST00000539739 COL1A1P02452 1464 aaPredicted RBP18.73■□□□□ 0.59
DDB1-216ENST00000539739 LRP2BPQ9P2M1 347 aa18.73■□□□□ 0.59
DDB1-216ENST00000539739 SUGT1Q9Y2Z0 365 aa18.73■□□□□ 0.59
DDB1-216ENST00000539739 GJA3Q9Y6H8 435 aa18.73■□□□□ 0.59
DDB1-216ENST00000539739 ZNF541Q9H0D2 1346 aa18.72■□□□□ 0.59
DDB1-216ENST00000539739 MYH13Q9UKX3 1938 aa18.72■□□□□ 0.59
DDB1-216ENST00000539739 TRIM6-TRIM34B2RNG4 842 aa18.72■□□□□ 0.59
DDB1-216ENST00000539739 TTC22Q5TAA0 569 aa18.72■□□□□ 0.59
DDB1-216ENST00000539739 GPC2Q8N158 579 aa18.72■□□□□ 0.59
DDB1-216ENST00000539739 AGBL3Q8NEM8 1001 aa18.72■□□□□ 0.59
DDB1-216ENST00000539739 SCN9AQ15858 1988 aa18.72■□□□□ 0.59
DDB1-216ENST00000539739 MAP4K4O95819 1239 aaPredicted RBP18.71■□□□□ 0.59
DDB1-216ENST00000539739 LDHBP07195 334 aaKnown RBP18.71■□□□□ 0.59
DDB1-216ENST00000539739 RPS12P25398 132 aaKnown RBP18.71■□□□□ 0.59
DDB1-216ENST00000539739 TBC1D9Q6ZT07 1266 aa18.71■□□□□ 0.59
DDB1-216ENST00000539739 CNTROBQ8N137 903 aa18.71■□□□□ 0.59
DDB1-216ENST00000539739 AKAP11Q9UKA4 1901 aa18.71■□□□□ 0.59
DDB1-216ENST00000539739 IGSF3O75054 1194 aa18.71■□□□□ 0.58
DDB1-216ENST00000539739 RILPL2Q969X0 211 aa18.71■□□□□ 0.58
DDB1-216ENST00000539739 EVI5LQ96CN4 794 aa18.71■□□□□ 0.58
DDB1-216ENST00000539739 EDC3Q96F86 508 aaKnown RBP18.71■□□□□ 0.58
DDB1-216ENST00000539739 MXD3Q9BW11 206 aa18.71■□□□□ 0.58
DDB1-216ENST00000539739 ANTXR1Q9H6X2 564 aa18.71■□□□□ 0.58
DDB1-216ENST00000539739 IDH1O75874 414 aaKnown RBP18.7■□□□□ 0.58
DDB1-216ENST00000539739 MAP3K12Q12852 859 aa18.7■□□□□ 0.58
DDB1-216ENST00000539739 LRRFIP1Q32MZ4 808 aaKnown RBP18.7■□□□□ 0.58
DDB1-216ENST00000539739 CERS5Q8N5B7 392 aa18.7■□□□□ 0.58
DDB1-216ENST00000539739 PIH1D3Q9NQM4 214 aaKnown RBP18.7■□□□□ 0.58
DDB1-216ENST00000539739 RAI14Q9P0K7 980 aa18.7■□□□□ 0.58
DDB1-216ENST00000539739 ZBTB12Q9Y330 459 aaPredicted RBP18.7■□□□□ 0.58
DDB1-216ENST00000539739 TIAM2Q8IVF5 1701 aa18.7■□□□□ 0.58
DDB1-216ENST00000539739 PRDX5P30044 214 aa18.69■□□□□ 0.58
DDB1-216ENST00000539739 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.69■□□□□ 0.583e-7■■■■□ 25.4
DDB1-216ENST00000539739 MAST3O60307 1309 aa18.69■□□□□ 0.58
DDB1-216ENST00000539739 GLTPD2A6NH11 291 aa18.68■□□□□ 0.58
DDB1-216ENST00000539739 F8W031 263 aaPredicted RBP18.68■□□□□ 0.58
DDB1-216ENST00000539739 DDNO94850 711 aaPredicted RBP18.68■□□□□ 0.58
DDB1-216ENST00000539739 MMP14P50281 582 aa18.68■□□□□ 0.58
DDB1-216ENST00000539739 DZIP1Q86YF9 867 aaKnown RBP18.68■□□□□ 0.58
DDB1-216ENST00000539739 KIAA0825Q8IV33 1275 aa18.68■□□□□ 0.58
DDB1-216ENST00000539739 OGFOD1Q8N543 542 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms