RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 LAMA4Q16363 1823 aa15.42■□□□□ 0.06
UBE3B-209ENST00000539584 CCT2P78371 535 aaKnown RBP15.42■□□□□ 0.06
UBE3B-209ENST00000539584 STK38Q15208 465 aa15.42■□□□□ 0.06
UBE3B-209ENST00000539584 AOPEPQ8N6M6 819 aa15.42■□□□□ 0.06
UBE3B-209ENST00000539584 FBXO18Q8NFZ0 1043 aa15.42■□□□□ 0.06
UBE3B-209ENST00000539584 C8orf76Q96K31 380 aa15.42■□□□□ 0.06
UBE3B-209ENST00000539584 AKAP2Q9Y2D5 859 aa15.42■□□□□ 0.06
UBE3B-209ENST00000539584 IKBKBO14920 756 aa15.41■□□□□ 0.06
UBE3B-209ENST00000539584 SLU7O95391 586 aaKnown RBP15.41■□□□□ 0.06
UBE3B-209ENST00000539584 TAF3Q5VWG9 929 aa15.41■□□□□ 0.06
UBE3B-209ENST00000539584 FILIP1Q7Z7B0 1213 aa15.41■□□□□ 0.06
UBE3B-209ENST00000539584 SPDYE4A6NLX3 237 aa15.41■□□□□ 0.06
UBE3B-209ENST00000539584 SPTLC2O15270 562 aa15.41■□□□□ 0.06
UBE3B-209ENST00000539584 FDPSP14324 419 aaKnown RBP15.41■□□□□ 0.06
UBE3B-209ENST00000539584 CABP4P57796 275 aa15.41■□□□□ 0.06
UBE3B-209ENST00000539584 NLRP12P59046 1061 aa15.41■□□□□ 0.06
UBE3B-209ENST00000539584 SYNE3Q6ZMZ3 975 aa15.41■□□□□ 0.06
UBE3B-209ENST00000539584 CREBRFQ8IUR6 639 aa15.41■□□□□ 0.06
UBE3B-209ENST00000539584 NDUFB9Q9Y6M9 179 aa15.41■□□□□ 0.06
UBE3B-209ENST00000539584 ATP5J2-PTCD1G3V325 749 aa15.4■□□□□ 0.06
UBE3B-209ENST00000539584 PTCD1O75127 700 aaKnown RBP15.4■□□□□ 0.06
UBE3B-209ENST00000539584 SLC3A2P08195 630 aaKnown RBP15.4■□□□□ 0.06
UBE3B-209ENST00000539584 CMA1P23946 247 aa15.4■□□□□ 0.06
UBE3B-209ENST00000539584 CCDC158Q5M9N0 1113 aa15.4■□□□□ 0.06
UBE3B-209ENST00000539584 ZNF592Q92610 1267 aa15.4■□□□□ 0.06
UBE3B-209ENST00000539584 FTOQ9C0B1 505 aaKnown RBP eCLIP15.4■□□□□ 0.06
UBE3B-209ENST00000539584 L2HGDHQ9H9P8 463 aa15.4■□□□□ 0.06
UBE3B-209ENST00000539584 ALS2Q96Q42 1657 aa15.4■□□□□ 0.06
UBE3B-209ENST00000539584 MEGF6O75095 1541 aa15.4■□□□□ 0.06
UBE3B-209ENST00000539584 SFPQP23246 707 aaKnown RBP eCLIP15.39■□□□□ 0.05
UBE3B-209ENST00000539584 MYSM1Q5VVJ2 828 aa15.39■□□□□ 0.05
UBE3B-209ENST00000539584 JMYQ8N9B5 988 aa15.39■□□□□ 0.05
UBE3B-209ENST00000539584 NCOA5Q9HCD5 579 aaKnown RBP15.39■□□□□ 0.05
UBE3B-209ENST00000539584 C1orf167Q5SNV9 1468 aa15.39■□□□□ 0.05
UBE3B-209ENST00000539584 PKD1L3Q7Z443 1732 aa15.39■□□□□ 0.05
UBE3B-209ENST00000539584 PARP4Q9UKK3 1724 aaKnown RBP15.39■□□□□ 0.05
UBE3B-209ENST00000539584 A0A1B0GUL7 405 aa15.39■□□□□ 0.05
UBE3B-209ENST00000539584 NDUFA8P51970 172 aa15.39■□□□□ 0.05
UBE3B-209ENST00000539584 NBPF11Q86T75 865 aa15.39■□□□□ 0.05
UBE3B-209ENST00000539584 NCOA7Q8NI08 942 aa15.39■□□□□ 0.05
UBE3B-209ENST00000539584 CEP126Q9P2H0 1117 aa15.39■□□□□ 0.05
UBE3B-209ENST00000539584 CBFA2T2O43439 604 aa15.38■□□□□ 0.05
UBE3B-209ENST00000539584 CHGBP05060 677 aa15.38■□□□□ 0.05
UBE3B-209ENST00000539584 TIMM10P62072 90 aa15.38■□□□□ 0.05
UBE3B-209ENST00000539584 KRT222Q8N1A0 295 aa15.38■□□□□ 0.05
UBE3B-209ENST00000539584 ZNF215Q9UL58 517 aaPredicted RBP15.38■□□□□ 0.05
UBE3B-209ENST00000539584 NAP1L2Q9ULW6 460 aaPredicted RBP15.38■□□□□ 0.05
UBE3B-209ENST00000539584 A0A1B0GVL5 298 aa15.38■□□□□ 0.05
UBE3B-209ENST00000539584 USP27XA6NNY8 438 aa15.38■□□□□ 0.05
UBE3B-209ENST00000539584 CPLX1O14810 134 aa15.38■□□□□ 0.05
UBE3B-209ENST00000539584 CYP27B1O15528 508 aa15.38■□□□□ 0.05
UBE3B-209ENST00000539584 CDKL5O76039 1030 aa15.38■□□□□ 0.05
UBE3B-209ENST00000539584 ZNF202O95125 648 aa15.38■□□□□ 0.05
UBE3B-209ENST00000539584 ELOA2Q8IYF1 753 aaPredicted RBP15.38■□□□□ 0.05
UBE3B-209ENST00000539584 RBM33Q96EV2 1170 aaKnown RBP15.38■□□□□ 0.05
UBE3B-209ENST00000539584 C19orf44Q9H6X5 657 aa15.38■□□□□ 0.05
UBE3B-209ENST00000539584 FAM53CQ9NYF3 392 aa15.38■□□□□ 0.05
UBE3B-209ENST00000539584 ORC3Q9UBD5 711 aaPredicted RBP15.38■□□□□ 0.05
UBE3B-209ENST00000539584 RGPD5Q99666 1765 aa15.37■□□□□ 0.05
UBE3B-209ENST00000539584 PPP6R2O75170 966 aa15.37■□□□□ 0.05
UBE3B-209ENST00000539584 ZC3H6P61129 1189 aaKnown RBP15.37■□□□□ 0.05
UBE3B-209ENST00000539584 ARID5BQ14865 1188 aa15.37■□□□□ 0.05
UBE3B-209ENST00000539584 ANO1Q5XXA6 986 aa15.37■□□□□ 0.05
UBE3B-209ENST00000539584 RALYLQ86SE5 291 aaKnown RBP15.37■□□□□ 0.05
UBE3B-209ENST00000539584 MB21D2Q8IYB1 491 aaPredicted RBP15.37■□□□□ 0.05
UBE3B-209ENST00000539584 APPBP2Q92624 585 aa15.37■□□□□ 0.05
UBE3B-209ENST00000539584 FAM237AA0A1B0GTK4 181 aa15.36■□□□□ 0.05
UBE3B-209ENST00000539584 SLC39A14Q15043 492 aa15.36■□□□□ 0.05
UBE3B-209ENST00000539584 OSBP2Q969R2 916 aa15.36■□□□□ 0.05
UBE3B-209ENST00000539584 SRRTQ9BXP5 876 aaKnown RBP15.36■□□□□ 0.05
UBE3B-209ENST00000539584 M0R2C6 588 aa15.36■□□□□ 0.05
UBE3B-209ENST00000539584 PRC1O43663 620 aa15.36■□□□□ 0.05
UBE3B-209ENST00000539584 CSB-PGBD3P0DP91 1061 aa15.36■□□□□ 0.05
UBE3B-209ENST00000539584 GUCY1B3Q02153 619 aa15.36■□□□□ 0.05
UBE3B-209ENST00000539584 DPCR1Q3MIW9 517 aa15.36■□□□□ 0.05
UBE3B-209ENST00000539584 E4F1Q66K89 784 aaPredicted RBP15.36■□□□□ 0.05
UBE3B-209ENST00000539584 CPLX2Q6PUV4 134 aaKnown RBP15.36■□□□□ 0.05
UBE3B-209ENST00000539584 FCHSD1Q86WN1 690 aa15.36■□□□□ 0.05
UBE3B-209ENST00000539584 XPO4Q9C0E2 1151 aaKnown RBP15.36■□□□□ 0.05
UBE3B-209ENST00000539584 TUBE1Q9UJT0 475 aa15.36■□□□□ 0.05
UBE3B-209ENST00000539584 CLIC4Q9Y696 253 aa15.36■□□□□ 0.05
UBE3B-209ENST00000539584 NEDD4P46934 1319 aa15.35■□□□□ 0.05
UBE3B-209ENST00000539584 GLI3P10071 1580 aa15.35■□□□□ 0.05
UBE3B-209ENST00000539584 KLF18A0A0U1RQI7 1052 aa15.35■□□□□ 0.05
UBE3B-209ENST00000539584 ZNF213O14771 459 aa15.35■□□□□ 0.05
UBE3B-209ENST00000539584 SMC2O95347 1197 aa15.35■□□□□ 0.05
UBE3B-209ENST00000539584 KIF23Q02241 960 aaPredicted RBP15.35■□□□□ 0.05
UBE3B-209ENST00000539584 TTC39AQ5SRH9 613 aa15.35■□□□□ 0.05
UBE3B-209ENST00000539584 AXDND1Q5T1B0 1012 aaPredicted RBP15.35■□□□□ 0.05
UBE3B-209ENST00000539584 PPP1R13BQ96KQ4 1090 aa15.35■□□□□ 0.05
UBE3B-209ENST00000539584 IFNKQ9P0W0 207 aa15.35■□□□□ 0.05
UBE3B-209ENST00000539584 COL18A1P39060 1754 aa15.35■□□□□ 0.05
UBE3B-209ENST00000539584 PHLPP2Q6ZVD8 1323 aa15.35■□□□□ 0.05
UBE3B-209ENST00000539584 GOLGA8BA8MQT2 603 aa15.34■□□□□ 0.05
UBE3B-209ENST00000539584 ERVV-2B6SEH9 535 aa15.34■□□□□ 0.05
UBE3B-209ENST00000539584 FGAP02671 866 aa15.34■□□□□ 0.05
UBE3B-209ENST00000539584 FOSBP53539 338 aa15.34■□□□□ 0.05
UBE3B-209ENST00000539584 TRDNQ13061 729 aa15.34■□□□□ 0.05
UBE3B-209ENST00000539584 TRIM28Q13263 835 aaKnown RBP15.34■□□□□ 0.05
UBE3B-209ENST00000539584 NCAPHQ15003 741 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms