RNA–Protein interactions for RNA: ENST00000539148.3

CLPB-210, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 5

Gene CLPB, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-210ENST00000539148 ZC3H4Q9UPT8 1303 aaKnown RBP12.41□□□□□ -0.42
CLPB-210ENST00000539148 PDE4AP27815 886 aa12.41□□□□□ -0.42
CLPB-210ENST00000539148 ADORA1P30542 326 aa12.41□□□□□ -0.42
CLPB-210ENST00000539148 PHKA1P46020 1223 aa12.41□□□□□ -0.42
CLPB-210ENST00000539148 EIF6P56537 245 aaKnown RBP12.41□□□□□ -0.42
CLPB-210ENST00000539148 AOC3Q16853 763 aa12.41□□□□□ -0.42
CLPB-210ENST00000539148 OLFM4Q6UX06 510 aa12.41□□□□□ -0.42
CLPB-210ENST00000539148 SLF2Q8IX21 1173 aa12.41□□□□□ -0.42
CLPB-210ENST00000539148 C16orf71Q8IYS4 520 aaPredicted RBP12.41□□□□□ -0.42
CLPB-210ENST00000539148 SNED1Q8TER0 1413 aa12.41□□□□□ -0.42
CLPB-210ENST00000539148 EVI5LQ96CN4 794 aa12.41□□□□□ -0.42
CLPB-210ENST00000539148 HAUS7Q99871 368 aa12.41□□□□□ -0.42
CLPB-210ENST00000539148 ZNF277Q9NRM2 450 aaPredicted RBP12.41□□□□□ -0.42
CLPB-210ENST00000539148 SUGT1Q9Y2Z0 365 aa12.41□□□□□ -0.42
CLPB-210ENST00000539148 USP17L3A6NCW0 530 aa12.4□□□□□ -0.42
CLPB-210ENST00000539148 USP17L4A6NCW7 530 aa12.4□□□□□ -0.42
CLPB-210ENST00000539148 TRIM6-TRIM34B2RNG4 842 aa12.4□□□□□ -0.42
CLPB-210ENST00000539148 ECE2O60344 883 aa12.4□□□□□ -0.42
CLPB-210ENST00000539148 FKBP1AP62942 108 aaKnown RBP12.4□□□□□ -0.42
CLPB-210ENST00000539148 MAP3K12Q12852 859 aa12.4□□□□□ -0.42
CLPB-210ENST00000539148 BMP2KLQ5H9B9 411 aa12.4□□□□□ -0.42
CLPB-210ENST00000539148 TTC22Q5TAA0 569 aa12.4□□□□□ -0.42
CLPB-210ENST00000539148 STRIP1Q5VSL9 837 aa12.4□□□□□ -0.42
CLPB-210ENST00000539148 USP17L1Q7RTZ2 530 aa12.4□□□□□ -0.42
CLPB-210ENST00000539148 ZNF784Q8NCA9 323 aaPredicted RBP12.4□□□□□ -0.42
CLPB-210ENST00000539148 PAG1Q9NWQ8 432 aa12.4□□□□□ -0.42
CLPB-210ENST00000539148 TLR7Q9NYK1 1049 aaKnown RBP12.4□□□□□ -0.42
CLPB-210ENST00000539148 FAM205AQ6ZU69 1335 aa12.39□□□□□ -0.43
CLPB-210ENST00000539148 SALL3Q9BXA9 1300 aa12.39□□□□□ -0.43
CLPB-210ENST00000539148 SALL1Q9NSC2 1324 aa12.39□□□□□ -0.43
CLPB-210ENST00000539148 NFKBIEO00221 500 aa12.39□□□□□ -0.43
CLPB-210ENST00000539148 ZFYP08048 801 aaPredicted RBP12.39□□□□□ -0.43
CLPB-210ENST00000539148 RASGRF1Q13972 1273 aa12.39□□□□□ -0.43
CLPB-210ENST00000539148 TTLL5Q6EMB2 1281 aa12.39□□□□□ -0.43
CLPB-210ENST00000539148 DPY19L2Q6NUT2 758 aa12.39□□□□□ -0.43
CLPB-210ENST00000539148 CERS3Q8IU89 383 aa12.39□□□□□ -0.43
CLPB-210ENST00000539148 DDRGK1Q96HY6 314 aa12.39□□□□□ -0.43
CLPB-210ENST00000539148 DNAJC2Q99543 621 aaKnown RBP12.39□□□□□ -0.43
CLPB-210ENST00000539148 BOLA2Q9H3K6 86 aa12.39□□□□□ -0.43
CLPB-210ENST00000539148 LRP2BPQ9P2M1 347 aa12.39□□□□□ -0.43
CLPB-210ENST00000539148 IRS2Q9Y4H2 1338 aa12.38□□□□□ -0.43
CLPB-210ENST00000539148 SNAP23O00161 211 aa12.38□□□□□ -0.43
CLPB-210ENST00000539148 LDHCP07864 332 aa12.38□□□□□ -0.43
CLPB-210ENST00000539148 YBX3P16989 372 aaKnown RBP eCLIP12.38□□□□□ -0.43
CLPB-210ENST00000539148 GSTO1P78417 241 aa12.38□□□□□ -0.43
CLPB-210ENST00000539148 DOK7Q18PE1 504 aa12.38□□□□□ -0.43
CLPB-210ENST00000539148 TXNRD3Q86VQ6 643 aa12.38□□□□□ -0.43
CLPB-210ENST00000539148 PI4K2BQ8TCG2 481 aa12.38□□□□□ -0.43
CLPB-210ENST00000539148 RUFY2Q8WXA3 655 aa12.38□□□□□ -0.43
CLPB-210ENST00000539148 FBXW7Q969H0 707 aa12.38□□□□□ -0.43
CLPB-210ENST00000539148 NOL10Q9BSC4 688 aaKnown RBP12.38□□□□□ -0.43
CLPB-210ENST00000539148 DBNDD1Q9H9R9 158 aa12.38□□□□□ -0.43
CLPB-210ENST00000539148 HMG20BQ9P0W2 317 aa12.38□□□□□ -0.43
CLPB-210ENST00000539148 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.38□□□□□ -0.43
CLPB-210ENST00000539148 DOCK2Q92608 1830 aa12.38□□□□□ -0.43
CLPB-210ENST00000539148 TIAM2Q8IVF5 1701 aa12.37□□□□□ -0.43
CLPB-210ENST00000539148 LDHBP07195 334 aaKnown RBP12.37□□□□□ -0.43
CLPB-210ENST00000539148 RPS12P25398 132 aaKnown RBP12.37□□□□□ -0.43
CLPB-210ENST00000539148 MCAMP43121 646 aa12.37□□□□□ -0.43
CLPB-210ENST00000539148 GTF2IP78347 998 aa12.37□□□□□ -0.43
CLPB-210ENST00000539148 CHAF1AQ13111 956 aaPredicted RBP12.37□□□□□ -0.43
CLPB-210ENST00000539148 CIAPIN1Q6FI81 312 aa12.37□□□□□ -0.43
CLPB-210ENST00000539148 ERICH6Q7L0X2 663 aa12.37□□□□□ -0.43
CLPB-210ENST00000539148 OGFOD1Q8N543 542 aa12.37□□□□□ -0.43
CLPB-210ENST00000539148 RILPL2Q969X0 211 aa12.37□□□□□ -0.43
CLPB-210ENST00000539148 FSD1Q9BTV5 496 aa12.37□□□□□ -0.43
CLPB-210ENST00000539148 RNF181Q9P0P0 153 aa12.37□□□□□ -0.43
CLPB-210ENST00000539148 ABCF2Q9UG63 623 aa12.37□□□□□ -0.43
CLPB-210ENST00000539148 HDAC9Q9UKV0 1011 aa12.37□□□□□ -0.43
CLPB-210ENST00000539148 RFX7Q2KHR2 1363 aa12.37□□□□□ -0.43
CLPB-210ENST00000539148 MAST2Q6P0Q8 1798 aa12.37□□□□□ -0.43
CLPB-210ENST00000539148 GOLIM4O00461 696 aa12.36□□□□□ -0.43
CLPB-210ENST00000539148 KLRK1P26718 216 aa12.36□□□□□ -0.43
CLPB-210ENST00000539148 ZAP70P43403 619 aa12.36□□□□□ -0.43
CLPB-210ENST00000539148 MFAP1P55081 439 aaKnown RBP12.36□□□□□ -0.43
CLPB-210ENST00000539148 RASSF7Q02833 373 aa12.36□□□□□ -0.43
CLPB-210ENST00000539148 MFSD14BQ5SR56 506 aa12.36□□□□□ -0.43
CLPB-210ENST00000539148 DZIP1Q86YF9 867 aaKnown RBP12.36□□□□□ -0.43
CLPB-210ENST00000539148 KBTBD3Q8NAB2 608 aa12.36□□□□□ -0.43
CLPB-210ENST00000539148 AGBL3Q8NEM8 1001 aa12.36□□□□□ -0.43
CLPB-210ENST00000539148 OTUD7AQ8TE49 926 aaPredicted RBP12.36□□□□□ -0.43
CLPB-210ENST00000539148 GPR101Q96P66 508 aaPredicted RBP12.36□□□□□ -0.43
CLPB-210ENST00000539148 IQSEC3Q9UPP2 1182 aaPredicted RBP12.36□□□□□ -0.43
CLPB-210ENST00000539148 MYH2Q9UKX2 1941 aa12.35□□□□□ -0.43
CLPB-210ENST00000539148 IDH1O75874 414 aaKnown RBP12.35□□□□□ -0.43
CLPB-210ENST00000539148 SNRKQ9NRH2 765 aa12.35□□□□□ -0.43
CLPB-210ENST00000539148 DIAPH3Q9NSV4 1193 aa12.35□□□□□ -0.43
CLPB-210ENST00000539148 RAI14Q9P0K7 980 aa12.35□□□□□ -0.43
CLPB-210ENST00000539148 SCN9AQ15858 1988 aa12.34□□□□□ -0.43
CLPB-210ENST00000539148 MYO5AQ9Y4I1 1855 aaKnown RBP12.34□□□□□ -0.43
CLPB-210ENST00000539148 WTIPA6NIX2 430 aaPredicted RBP12.34□□□□□ -0.43
CLPB-210ENST00000539148 FZD9O00144 591 aa12.34□□□□□ -0.43
CLPB-210ENST00000539148 VIL1P09327 827 aaKnown RBP12.34□□□□□ -0.43
CLPB-210ENST00000539148 HDLBPQ00341 1268 aaKnown RBP12.34□□□□□ -0.43
CLPB-210ENST00000539148 C9orf131Q5VYM1 1079 aa12.34□□□□□ -0.43
CLPB-210ENST00000539148 GPC2Q8N158 579 aa12.34□□□□□ -0.43
CLPB-210ENST00000539148 IPO9Q96P70 1041 aaKnown RBP12.34□□□□□ -0.43
CLPB-210ENST00000539148 MRIQ9BWK5 157 aa12.34□□□□□ -0.43
CLPB-210ENST00000539148 CDC45O75419 566 aa12.33□□□□□ -0.44
CLPB-210ENST00000539148 BAG3O95817 575 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms